FFCP PHASE1:Mm9::chr12:62629665..62629670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:62629665..62629670,+ | |||
|description=CAGE_peak_at_chr12:62629665..62629670,+ | |description=CAGE_peak_at_chr12:62629665..62629670,+ | ||
|id=chr12:62629665..62629670,+ | |id=chr12:62629665..62629670,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.57e-20!23;CL:0000337!1.57e-20!23;CL:0000540!2.18e-12!33;CL:0000047!2.18e-12!33;CL:0000031!2.18e-12!33;CL:0000404!2.18e-12!33;CL:0000221!1.07e-09!44;CL:0000133!1.07e-09!44;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0002319!5.56e-09!43;CL:0000055!6.41e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.57e-20!23;CL:0000337!1.57e-20!23;CL:0000540!2.18e-12!33;CL:0000047!2.18e-12!33;CL:0000031!2.18e-12!33;CL:0000404!2.18e-12!33;CL:0000221!1.07e-09!44;CL:0000133!1.07e-09!44;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0002319!5.56e-09!43;CL:0000055!6.41e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-12,23;CL:0000337,3.37e-12,23;CL:0000540,1.46e-08,33;CL:0000047,1.46e-08,33;CL:0000031,1.46e-08,33;CL:0000404,1.46e-08,33;CL:0000393,2.89e-07,39;CL:0000211,2.89e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.40e-22!34;UBERON:0001049!1.26e-20!52;UBERON:0005068!1.26e-20!52;UBERON:0006241!1.26e-20!52;UBERON:0007135!1.26e-20!52;UBERON:0000073!2.70e-19!75;UBERON:0001016!2.70e-19!75;UBERON:0001017!4.34e-19!73;UBERON:0005743!4.34e-19!73;UBERON:0000955!3.70e-17!50;UBERON:0006238!3.70e-17!50;UBERON:0002791!2.05e-16!29;UBERON:0003528!2.05e-16!29;UBERON:0001893!2.05e-16!29;UBERON:0002616!3.00e-16!49;UBERON:0002346!3.81e-16!71;UBERON:0003075!3.81e-16!71;UBERON:0007284!3.81e-16!71;UBERON:0000033!9.69e-16!63;UBERON:0004121!4.01e-15!102;UBERON:0000924!4.01e-15!102;UBERON:0006601!4.01e-15!102;UBERON:0003080!6.28e-14!40;UBERON:0002780!4.62e-13!39;UBERON:0001890!4.62e-13!39;UBERON:0006240!4.62e-13!39;UBERON:0003056!6.37e-13!49;UBERON:0000956!1.58e-11!21;UBERON:0001869!1.58e-11!21;UBERON:0000203!1.58e-11!21;UBERON:0007811!5.87e-09!86;UBERON:0002240!1.68e-08!6;UBERON:0005174!1.68e-08!6;UBERON:0001137!1.68e-08!6;UBERON:0002619!1.09e-07!17;UBERON:0003076!1.22e-07!12;UBERON:0003057!1.22e-07!12;UBERON:0000153!1.95e-07!94;UBERON:0001948!1.98e-07!5;UBERON:0002315!1.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002020,1.10e-11,34;UBERON:0000073,6.76e-10,54;UBERON:0003528,1.11e-09,29;UBERON:0002791,1.11e-09,29;UBERON:0001893,1.11e-09,29;UBERON:0001049,1.19e-07,52;UBERON:0005068,1.19e-07,52;UBERON:0006241,1.19e-07,52;UBERON:0007135,1.19e-07,52;UBERON:0001017,2.72e-07,73;UBERON:0002780,3.07e-07,39;UBERON:0001890,3.07e-07,39;UBERON:0006240,3.07e-07,39;UBERON:0001016,4.29e-07,75;UBERON:0003080,4.63e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.857435594504678,0.0958454710182364,0,0,0.893811366596314,1.22885226604995,0.791317726381163,0.0914876436024097,1.56274011167028,0,2.25105044012672,0.763991238884051,1.47314292736834,0.854230084794618,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,0.521472960576829,1.79000820131231,0,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.777804753376191,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,1.35942722695261,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.857435594504678,0.0958454710182364,0,0,0.893811366596314,1.22885226604995,0.791317726381163,0.0914876436024097,1.56274011167028,0,2.25105044012672,0.763991238884051,1.47314292736834,0.854230084794618,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,0.521472960576829,1.79000820131231,0,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.777804753376191,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,1.35942722695261,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr12:62629665..62629670,+ | |short_description=p@chr12:62629665..62629670,+ | ||
}} | }} |
Latest revision as of 03:45, 5 August 2015
Short description: | p@chr12:62629665..62629670, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:62629665..62629670, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.37e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.37e-12 | 23 |
neuron | 1.46e-08 | 33 |
neuronal stem cell | 1.46e-08 | 33 |
neuroblast | 1.46e-08 | 33 |
electrically signaling cell | 1.46e-08 | 33 |
electrically responsive cell | 2.89e-07 | 39 |
electrically active cell | 2.89e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
cortex | 1.55e-12 | 1 |
zygote cortex | 1.55e-12 | 1 |
gray matter | 1.10e-11 | 34 |
regional part of nervous system | 6.76e-10 | 54 |
brain grey matter | 1.11e-09 | 29 |
regional part of telencephalon | 1.11e-09 | 29 |
telencephalon | 1.11e-09 | 29 |
neural tube | 1.19e-07 | 52 |
neural rod | 1.19e-07 | 52 |
future spinal cord | 1.19e-07 | 52 |
neural keel | 1.19e-07 | 52 |
central nervous system | 2.72e-07 | 73 |
regional part of forebrain | 3.07e-07 | 39 |
forebrain | 3.07e-07 | 39 |
future forebrain | 3.07e-07 | 39 |
nervous system | 4.29e-07 | 75 |
anterior neural tube | 4.63e-07 | 40 |