FFCP PHASE1:Hg19::chr11:122073019..122073034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:122073019..122073034,- | |||
|description=CAGE_peak_at_chr11:122073019..122073034,- | |description=CAGE_peak_at_chr11:122073019..122073034,- | ||
|id=chr11:122073019..122073034,- | |id=chr11:122073019..122073034,- | ||
|ontology_enrichment_celltype=CL:0000055!1.14e-34!180;CL:0000057!8.49e-21!75;CL:0000680!3.67e-17!57;CL:0000056!3.67e-17!57;CL:0000355!3.67e-17!57;CL:0002620!4.70e-15!23;CL:0000187!7.13e-15!54;CL:0000183!8.15e-14!59;CL:0000393!1.94e-12!60;CL:0000211!1.94e-12!60;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0000359!1.30e-11!32;CL:0002371!8.23e-11!591;CL:0000723!2.97e-10!436;CL:0000144!4.48e-10!625;CL:0000048!5.71e-10!430;CL:0000034!1.48e-09!444;CL:0000222!2.33e-08!119;CL:0000548!6.43e-08!679;CL:0000004!6.43e-08!679;CL:0000255!6.43e-08!679;CL:0002595!1.03e-07!5;CL:0000012!1.03e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.14e-34!180;CL:0000057!8.49e-21!75;CL:0000680!3.67e-17!57;CL:0000056!3.67e-17!57;CL:0000355!3.67e-17!57;CL:0002620!4.70e-15!23;CL:0000187!7.13e-15!54;CL:0000183!8.15e-14!59;CL:0000393!1.94e-12!60;CL:0000211!1.94e-12!60;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0000359!1.30e-11!32;CL:0002371!8.23e-11!591;CL:0000723!2.97e-10!436;CL:0000144!4.48e-10!625;CL:0000048!5.71e-10!430;CL:0000034!1.48e-09!444;CL:0000222!2.33e-08!119;CL:0000548!6.43e-08!679;CL:0000004!6.43e-08!679;CL:0000255!6.43e-08!679;CL:0002595!1.03e-07!5;CL:0000012!1.03e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002596;5.98e-18;2!CL:0000346;5.56e-12;3!CL:1000428;5.56e-12;3!CL:0000307;5.56e-12;3!CL:0000359;8.22e-12;32!CL:0002550;1.30e-09;1!CL:0002616;1.30e-09;1!CL:0000192;1.89e-08;43!CL:0002595;9.58e-08;5!CL:0002559;1.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,3.16e-18,2;CL:0000359,2.75e-12,32;CL:0000346,3.01e-12,3;CL:1000428,3.01e-12,3;CL:0000068,5.58e-12,3;CL:0000069,5.58e-12,3;CL:0000307,5.58e-12,3;CL:0000377,5.58e-12,3;CL:0002616,6.31e-10,1;CL:0002550,1.48e-09,1;CL:0000192,6.08e-09,43;CL:0000514,6.08e-09,43;CL:0002559,1.08e-07,5;CL:0002595,1.15e-07,5;CL:0000187,8.10e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000377;5.56e-12;3!CL:0000514;1.89e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.35e-20!83;UBERON:0002329!4.35e-20!83;UBERON:0003077!4.35e-20!83;UBERON:0003059!4.35e-20!83;UBERON:0007282!4.35e-20!83;UBERON:0009618!4.35e-20!83;UBERON:0007285!4.35e-20!83;UBERON:0004290!7.95e-19!70;UBERON:0000486!2.51e-18!82;UBERON:0001134!2.46e-15!61;UBERON:0002036!2.46e-15!61;UBERON:0003082!2.46e-15!61;UBERON:0002385!1.63e-14!63;UBERON:0001015!1.63e-14!63;UBERON:0000383!1.63e-14!63;UBERON:0004573!2.40e-11!33;UBERON:0004571!2.40e-11!33;UBERON:0002199!6.86e-11!45;UBERON:0002416!6.86e-11!45;UBERON:0000475!7.52e-11!365;UBERON:0001637!7.64e-11!42;UBERON:0003509!7.64e-11!42;UBERON:0004572!7.64e-11!42;UBERON:0002097!1.24e-10!40;UBERON:0003102!3.20e-10!95;UBERON:0005256!9.66e-09!143;UBERON:0002049!1.12e-08!79;UBERON:0007798!1.12e-08!79;UBERON:0001981!7.83e-08!60;UBERON:0007500!7.83e-08!60;UBERON:0004537!7.83e-08!60;UBERON:0006965!7.83e-08!60;UBERON:0003834!1.03e-07!5;UBERON:0001533!1.03e-07!5;UBERON:0002100!4.10e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;5.98e-18;2!UBERON:0004573;4.61e-14;33!UBERON:0004571;4.61e-14;33!UBERON:0000412;5.56e-12;3!UBERON:0001992;5.56e-12;3!UBERON:0001637;2.61e-09;42!UBERON:0003509;2.61e-09;42!UBERON:0004572;2.61e-09;42!UBERON:0003834;9.58e-08;5!UBERON:0001533;9.58e-08;5!UBERON:0002073;1.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,3.16e-18,2;UBERON:0004573,1.63e-15,33;UBERON:0004571,1.63e-15,33;UBERON:0000412,3.01e-12,3;UBERON:0001992,3.01e-12,3;UBERON:0001637,5.78e-12,42;UBERON:0003509,5.78e-12,42;UBERON:0004572,5.78e-12,42;UBERON:0000055,7.88e-09,68;UBERON:0002329,2.29e-08,71;UBERON:0003059,2.29e-08,71;UBERON:0007282,2.29e-08,71;UBERON:0004290,2.29e-08,71;UBERON:0009618,2.29e-08,71;UBERON:0003077,3.12e-08,72;UBERON:0007285,3.12e-08,72;UBERON:0007500,3.29e-08,59;UBERON:0001981,3.29e-08,59;UBERON:0004537,3.29e-08,59;UBERON:0006965,3.29e-08,59;UBERON:0007524,4.22e-08,73;UBERON:0002073,1.08e-07,5;UBERON:0005086,1.08e-07,5;UBERON:0003834,1.15e-07,5;UBERON:0001533,1.15e-07,5;UBERON:0002049,1.58e-07,78;UBERON:0007798,1.58e-07,78;UBERON:0007503,1.70e-07,78;UBERON:0000486,5.77e-07,83 | |||
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|short_description=p@chr11:122073019..122073034,- | |short_description=p@chr11:122073019..122073034,- | ||
}} | }} |
Latest revision as of 19:18, 23 July 2015
Short description: | p@chr11:122073019..122073034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122073019..122073034, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 3.16e-18 | 2 |
vascular associated smooth muscle cell | 2.75e-12 | 32 |
hair follicle dermal papilla cell | 3.01e-12 | 3 |
stem cell of epidermis | 3.01e-12 | 3 |
duct epithelial cell | 5.58e-12 | 3 |
branched duct epithelial cell | 5.58e-12 | 3 |
tracheal epithelial cell | 5.58e-12 | 3 |
tracheoblast | 5.58e-12 | 3 |
perirenal adipocyte cell | 6.31e-10 | 1 |
fibroblast of the conjuctiva | 1.48e-09 | 1 |
smooth muscle cell | 6.08e-09 | 43 |
smooth muscle myoblast | 6.08e-09 | 43 |
hair follicle cell | 1.08e-07 | 5 |
smooth muscle cell of the subclavian artery | 1.15e-07 | 5 |
muscle cell | 8.10e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 3.16e-18 | 2 |
systemic artery | 1.63e-15 | 33 |
systemic arterial system | 1.63e-15 | 33 |
dermal papilla | 3.01e-12 | 3 |
papillary layer of dermis | 3.01e-12 | 3 |
artery | 5.78e-12 | 42 |
arterial blood vessel | 5.78e-12 | 42 |
arterial system | 5.78e-12 | 42 |
vessel | 7.88e-09 | 68 |
somite | 2.29e-08 | 71 |
presomitic mesoderm | 2.29e-08 | 71 |
presumptive segmental plate | 2.29e-08 | 71 |
dermomyotome | 2.29e-08 | 71 |
trunk paraxial mesoderm | 2.29e-08 | 71 |
paraxial mesoderm | 3.12e-08 | 72 |
presumptive paraxial mesoderm | 3.12e-08 | 72 |
epithelial tube open at both ends | 3.29e-08 | 59 |
blood vessel | 3.29e-08 | 59 |
blood vasculature | 3.29e-08 | 59 |
vascular cord | 3.29e-08 | 59 |
dense mesenchyme tissue | 4.22e-08 | 73 |
hair follicle | 1.08e-07 | 5 |
hair follicle placode | 1.08e-07 | 5 |
thoracic segment blood vessel | 1.15e-07 | 5 |
subclavian artery | 1.15e-07 | 5 |
vasculature | 1.58e-07 | 78 |
vascular system | 1.58e-07 | 78 |
epithelial vesicle | 1.70e-07 | 78 |
multilaminar epithelium | 5.77e-07 | 83 |