FFCP PHASE1:Mm9::chr18:57293101..57293116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70417 | |EntrezGene=70417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1165 | |||
|TSSclassifier=NA | |||
|UniProt=Q6DIB5 | |UniProt=Q6DIB5 | ||
|association_with_transcript=357bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end | |association_with_transcript=357bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end | ||
|cluster_id=chr18:57293101..57293116,+ | |||
|description=CAGE_peak_9_at_Megf10_5end | |description=CAGE_peak_9_at_Megf10_5end | ||
|id=chr18:57293101..57293116,+ | |id=chr18:57293101..57293116,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.12e-15!44;CL:0000133!3.12e-15!44;CL:0002319!1.37e-14!43;CL:0000540!2.64e-14!33;CL:0000047!2.64e-14!33;CL:0000031!2.64e-14!33;CL:0000404!2.64e-14!33;CL:0000055!2.41e-12!50;CL:0000393!3.13e-12!39;CL:0000211!3.13e-12!39;CL:0000107!9.03e-09!9;CL:0000117!1.54e-07!23;CL:0000337!1.54e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.50e-22,9;CL:0000221,6.83e-18,44;CL:0000133,6.83e-18,44;CL:0000540,9.44e-18,33;CL:0000047,9.44e-18,33;CL:0000031,9.44e-18,33;CL:0000404,9.44e-18,33;CL:0002319,1.63e-16,43;CL:0000393,1.96e-16,39;CL:0000211,1.96e-16,39;CL:0002321,1.01e-10,70;CL:0002614,2.22e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.12e-21!75;UBERON:0001016!7.12e-21!75;UBERON:0004121!2.22e-19!102;UBERON:0000924!2.22e-19!102;UBERON:0006601!2.22e-19!102;UBERON:0001017!2.54e-19!73;UBERON:0005743!2.54e-19!73;UBERON:0000033!1.84e-14!63;UBERON:0002346!4.30e-14!71;UBERON:0003075!4.30e-14!71;UBERON:0007284!4.30e-14!71;UBERON:0000955!5.51e-12!50;UBERON:0006238!5.51e-12!50;UBERON:0002616!1.78e-11!49;UBERON:0001049!1.23e-10!52;UBERON:0005068!1.23e-10!52;UBERON:0006241!1.23e-10!52;UBERON:0007135!1.23e-10!52;UBERON:0003056!1.97e-10!49;UBERON:0000010!2.08e-10!11;UBERON:0002410!9.03e-09!9;UBERON:0003080!6.42e-08!40;UBERON:0000153!2.14e-07!94;UBERON:0002780!2.15e-07!39;UBERON:0001890!2.15e-07!39;UBERON:0006240!2.15e-07!39;UBERON:0007811!5.26e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.51e-27,11;UBERON:0002410,1.50e-22,9;UBERON:0001016,1.53e-22,75;UBERON:0001017,1.57e-19,73;UBERON:0004121,3.89e-19,95;UBERON:0000924,3.89e-19,95;UBERON:0006601,3.89e-19,95;UBERON:0002950,2.53e-09,4;UBERON:0001891,2.53e-09,4;UBERON:0009616,2.53e-09,4;UBERON:0010286,2.53e-09,4;UBERON:0010313,8.87e-09,3;UBERON:0002342,8.87e-09,3;UBERON:0002005,8.87e-09,3;UBERON:0005428,8.87e-09,3;UBERON:0005062,8.87e-09,3;UBERON:0002346,9.97e-09,64;UBERON:0003075,9.97e-09,64;UBERON:0007284,9.97e-09,64;UBERON:0000013,1.75e-08,3;UBERON:0000011,1.75e-08,3;UBERON:0010371,4.31e-08,73;UBERON:0002038,2.22e-07,3;UBERON:0009663,2.22e-07,3;UBERON:0009661,2.22e-07,3;UBERON:0000125,2.22e-07,3;UBERON:0002308,2.22e-07,3;UBERON:0000073,3.37e-07,54 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,2.57259436035947,0.286533439938757,0,0,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,0.675029691658453,1.26194976810829,0.571301968807607,0,0.979926393719632,0.287536413054709,0,2.20231761998777,0.893811366596314,1.0752457327937,0.263772575460388,0.548925861614458,0.52091337055676,1.3959149950069,1.68828783009504,1.06958773443767,0,0.854230084794618,0.745597783301202,6.51245262665383,2.04043212288321,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.922461989024234,0,0.23517741427141,0,0,0,0,1.7794353494215,0.220841518460394,0,0,1.75668478206928,3.14170060220183,0.255457055208591,0.11981512450592,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0,0,1.0389402227978,0.973447578406546,0.203678727700633,0.622034853050465,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,1.21812241927647,0.517406741478031,0,1.32374256117473,0.703804496655795,0.876782929710299,0,1.0447564995665,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.28932855251423,0.163934945376675,0.757412781613119,3.15508219416257,3.90438744296638,3.23135096599198,3.34556317133573,2.00518806674155,2.26461224631066,4.85772842009873,3.21481443702443,1.58115111178609,0.963963949265421,0.425820255624806,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0.214337035031592,0,0.713475270408282,0.658196082408484,0.304464949114599,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0,0.209613162627982,0,0,1.23621034343337,0.64183841918363,0.505394423527595,0,0.943131706930381,0.842773567228942,0.640251524048693,0.631790158511746,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.953744759789284,0.436039249896986,0.658765662907314,0.761531471025089,0.73171189149109,1.05227884575137,0.543216455383447,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,1.73615949883027,0.499621155875892,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,2.57259436035947,0.286533439938757,0,0,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,0.675029691658453,1.26194976810829,0.571301968807607,0,0.979926393719632,0.287536413054709,0,2.20231761998777,0.893811366596314,1.0752457327937,0.263772575460388,0.548925861614458,0.52091337055676,1.3959149950069,1.68828783009504,1.06958773443767,0,0.854230084794618,0.745597783301202,6.51245262665383,2.04043212288321,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.922461989024234,0,0.23517741427141,0,0,0,0,1.7794353494215,0.220841518460394,0,0,1.75668478206928,3.14170060220183,0.255457055208591,0.11981512450592,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0,0,1.0389402227978,0.973447578406546,0.203678727700633,0.622034853050465,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,1.21812241927647,0.517406741478031,0,1.32374256117473,0.703804496655795,0.876782929710299,0,1.0447564995665,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.28932855251423,0.163934945376675,0.757412781613119,3.15508219416257,3.90438744296638,3.23135096599198,3.34556317133573,2.00518806674155,2.26461224631066,4.85772842009873,3.21481443702443,1.58115111178609,0.963963949265421,0.425820255624806,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0.214337035031592,0,0.713475270408282,0.658196082408484,0.304464949114599,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0,0.209613162627982,0,0,1.23621034343337,0.64183841918363,0.505394423527595,0,0.943131706930381,0.842773567228942,0.640251524048693,0.631790158511746,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.953744759789284,0.436039249896986,0.658765662907314,0.761531471025089,0.73171189149109,1.05227884575137,0.543216455383447,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,1.73615949883027,0.499621155875892,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421 | ||
|short_description=p9@Megf10 | |short_description=p9@Megf10 | ||
}} | }} |
Latest revision as of 12:24, 1 October 2015
Short description: | p9@Megf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Megf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1165 |
Association with transcript: | 357bp_to_ENSMUST00000075770, NM_001001979, uc008eyz.2_5end |
EntrezGene: | Megf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.50e-22 | 9 |
ectodermal cell | 6.83e-18 | 44 |
neurectodermal cell | 6.83e-18 | 44 |
neuron | 9.44e-18 | 33 |
neuronal stem cell | 9.44e-18 | 33 |
neuroblast | 9.44e-18 | 33 |
electrically signaling cell | 9.44e-18 | 33 |
neural cell | 1.63e-16 | 43 |
electrically responsive cell | 1.96e-16 | 39 |
electrically active cell | 1.96e-16 | 39 |
embryonic cell | 1.01e-10 | 70 |
neuron of the substantia nigra | 2.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.51e-27 | 11 |
autonomic nervous system | 1.50e-22 | 9 |
nervous system | 1.53e-22 | 75 |
central nervous system | 1.57e-19 | 73 |
ectoderm-derived structure | 3.89e-19 | 95 |
ectoderm | 3.89e-19 | 95 |
presumptive ectoderm | 3.89e-19 | 95 |
regional part of midbrain | 2.53e-09 | 4 |
midbrain | 2.53e-09 | 4 |
presumptive midbrain | 2.53e-09 | 4 |
midbrain neural tube | 2.53e-09 | 4 |
neural crest-derived structure | 8.87e-09 | 3 |
neural crest | 8.87e-09 | 3 |
enteric nervous system | 8.87e-09 | 3 |
vagal neural crest | 8.87e-09 | 3 |
neural fold | 8.87e-09 | 3 |
neurectoderm | 9.97e-09 | 64 |
neural plate | 9.97e-09 | 64 |
presumptive neural plate | 9.97e-09 | 64 |
sympathetic nervous system | 1.75e-08 | 3 |
parasympathetic nervous system | 1.75e-08 | 3 |
ecto-epithelium | 4.31e-08 | 73 |
substantia nigra | 2.22e-07 | 3 |
telencephalic nucleus | 2.22e-07 | 3 |
midbrain nucleus | 2.22e-07 | 3 |
neural nucleus | 2.22e-07 | 3 |
nucleus of brain | 2.22e-07 | 3 |
regional part of nervous system | 3.37e-07 | 54 |