FFCP PHASE1:Hg19::chr11:67007548..67007610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22992 | |EntrezGene=22992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |HGNC=13606 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010rpn.1_5end | |association_with_transcript=0bp_to_uc010rpn.1_5end | ||
|cluster_id=chr11:67007548..67007610,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_3_at_KDM2A_5end | |description=CAGE_peak_3_at_KDM2A_5end | ||
|id=chr11:67007548..67007610,+ | |id=chr11:67007548..67007610,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.85e-22!53;CL:0000051!8.85e-22!53;CL:0000838!1.29e-21!52;CL:0000037!4.38e-15!172;CL:0000566!4.38e-15!172;CL:0000988!5.27e-14!182;CL:0000738!3.85e-13!140;CL:0002032!1.60e-12!165;CL:0000837!1.60e-12!165;CL:0000084!4.23e-12!25;CL:0000827!4.23e-12!25;CL:0000791!1.22e-11!18;CL:0000789!1.22e-11!18;CL:0002420!1.22e-11!18;CL:0002419!1.22e-11!18;CL:0000790!1.22e-11!18;CL:0000945!5.92e-09!24;CL:0000826!5.92e-09!24;CL:0000236!2.45e-08!14;CL:0000625!9.14e-08!11;CL:0002031!1.05e-07!124;CL:0002087!1.68e-07!119 | |ontology_enrichment_celltype=CL:0000542!8.85e-22!53;CL:0000051!8.85e-22!53;CL:0000838!1.29e-21!52;CL:0000037!4.38e-15!172;CL:0000566!4.38e-15!172;CL:0000988!5.27e-14!182;CL:0000738!3.85e-13!140;CL:0002032!1.60e-12!165;CL:0000837!1.60e-12!165;CL:0000084!4.23e-12!25;CL:0000827!4.23e-12!25;CL:0000791!1.22e-11!18;CL:0000789!1.22e-11!18;CL:0002420!1.22e-11!18;CL:0002419!1.22e-11!18;CL:0000790!1.22e-11!18;CL:0000945!5.92e-09!24;CL:0000826!5.92e-09!24;CL:0000236!2.45e-08!14;CL:0000625!9.14e-08!11;CL:0002031!1.05e-07!124;CL:0002087!1.68e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.73e-13;53!CL:0000084;3.74e-12;25!CL:0000791;9.61e-12;18!CL:0000789;9.61e-12;18!CL:0002419;9.61e-12;18!CL:0000945;7.17e-09;24!CL:0000236;1.52e-08;13!CL:0000625;8.62e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.85e-22,53;CL:0000051,8.85e-22,53;CL:0000838,1.29e-21,52;CL:0000037,3.12e-15,168;CL:0000988,6.07e-14,177;CL:0000738,2.55e-13,136;CL:0002032,1.21e-12,161;CL:0000837,1.21e-12,161;CL:0000084,4.23e-12,25;CL:0000827,4.23e-12,25;CL:0000791,1.22e-11,18;CL:0000789,1.22e-11,18;CL:0002420,1.22e-11,18;CL:0002419,1.22e-11,18;CL:0000790,1.22e-11,18;CL:0000945,5.91e-09,24;CL:0000826,5.91e-09,24;CL:0000236,2.45e-08,14;CL:0002031,8.44e-08,120;CL:0000625,9.14e-08,11;CL:0002087,1.34e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;4.73e-13;53!CL:0000790;9.61e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.00e-07!15;UBERON:0000179!3.00e-07!15;UBERON:0000463!3.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.73e-07;15!UBERON:0000179;2.73e-07;15!UBERON:0000463;2.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.00e-07,15;UBERON:0000179,3.00e-07,15;UBERON:0000463,3.00e-07,15 | |||
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| ||
|short_description=p3@KDM2A | |short_description=p3@KDM2A | ||
}} | }} |
Latest revision as of 16:53, 19 September 2015
Short description: | p3@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KDM2A_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_uc010rpn.1_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.85e-22 | 53 |
common lymphoid progenitor | 8.85e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.29e-21 | 52 |
hematopoietic stem cell | 3.12e-15 | 168 |
hematopoietic cell | 6.07e-14 | 177 |
leukocyte | 2.55e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.21e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-12 | 161 |
T cell | 4.23e-12 | 25 |
pro-T cell | 4.23e-12 | 25 |
mature alpha-beta T cell | 1.22e-11 | 18 |
alpha-beta T cell | 1.22e-11 | 18 |
immature T cell | 1.22e-11 | 18 |
mature T cell | 1.22e-11 | 18 |
immature alpha-beta T cell | 1.22e-11 | 18 |
lymphocyte of B lineage | 5.91e-09 | 24 |
pro-B cell | 5.91e-09 | 24 |
B cell | 2.45e-08 | 14 |
hematopoietic lineage restricted progenitor cell | 8.44e-08 | 120 |
CD8-positive, alpha-beta T cell | 9.14e-08 | 11 |
nongranular leukocyte | 1.34e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 3.00e-07 | 15 |
haemolymphatic fluid | 3.00e-07 | 15 |
organism substance | 3.00e-07 | 15 |