FFCP PHASE1:Hg19::chr11:87908032..87908043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:87908032..87908043,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr11:87908032..87908043,+ | |description=CAGE_peak_at_chr11:87908032..87908043,+ | ||
|id=chr11:87908032..87908043,+ | |id=chr11:87908032..87908043,+ | ||
|ontology_enrichment_celltype=CL:0002274!9.17e-17!5;CL:0000457!9.17e-17!5;CL:0002191!9.17e-17!5;CL:0000097!9.17e-17!5;CL:0000831!9.17e-17!5;CL:0002028!9.17e-17!5;CL:0000453!5.90e-16!5;CL:0001014!3.51e-11!2;CL:0001016!3.51e-11!2;CL:0000163!2.38e-09!9;CL:0002393!3.08e-09!9;CL:0002397!3.08e-09!9;CL:0000990!6.47e-09!8;CL:0000767!1.75e-07!3;CL:0000738!1.97e-07!140;CL:0000451!2.63e-07!10 | |ontology_enrichment_celltype=CL:0002274!9.17e-17!5;CL:0000457!9.17e-17!5;CL:0002191!9.17e-17!5;CL:0000097!9.17e-17!5;CL:0000831!9.17e-17!5;CL:0002028!9.17e-17!5;CL:0000453!5.90e-16!5;CL:0001014!3.51e-11!2;CL:0001016!3.51e-11!2;CL:0000163!2.38e-09!9;CL:0002393!3.08e-09!9;CL:0002397!3.08e-09!9;CL:0000990!6.47e-09!8;CL:0000767!1.75e-07!3;CL:0000738!1.97e-07!140;CL:0000451!2.63e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.03e-60;5!CL:0000163;8.87e-34;9!CL:0002262;1.07e-17;2!CL:1000398;1.07e-17;2!CL:0002567;2.89e-12;3!CL:0000151;3.97e-09;36!CL:0002393;8.97e-07;6!CL:0002397;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.03e-60,5;CL:0002028,6.03e-60,5;CL:0000163,8.87e-34,9;CL:0002262,9.07e-18,2;CL:1000398,9.07e-18,2;CL:0002567,2.89e-12,3;CL:0000151,4.60e-09,36;CL:0000839,1.82e-08,66;CL:0000557,2.38e-08,67;CL:0000766,8.24e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.07e-17;2!UBERON:0003497;1.07e-17;2!UBERON:0003909;1.07e-17;2!UBERON:0003835;1.07e-17;2!UBERON:0001280;2.89e-12;3!UBERON:0004647;2.89e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.07e-18,2;UBERON:0003497,9.07e-18,2;UBERON:0003909,9.07e-18,2;UBERON:0003835,9.07e-18,2;UBERON:0001280,2.59e-12,3;UBERON:0004647,2.59e-12,3;UBERON:0005171,2.59e-12,3;UBERON:0002371,1.98e-07,76;UBERON:0001474,6.33e-07,82;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6 | |||
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|short_description=p@chr11:87908032..87908043,+ | |short_description=p@chr11:87908032..87908043,+ | ||
}} | }} |
Latest revision as of 03:22, 24 July 2015
Short description: | p@chr11:87908032..87908043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:87908032..87908043, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.03e-60 | 5 |
basophil mast progenitor cell | 6.03e-60 | 5 |
endocrine cell | 8.87e-34 | 9 |
endothelial cell of sinusoid | 9.07e-18 | 2 |
endothelial cell of hepatic sinusoid | 9.07e-18 | 2 |
light melanocyte | 2.89e-12 | 3 |
secretory cell | 4.60e-09 | 36 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
granulocyte monocyte progenitor cell | 2.38e-08 | 67 |
myeloid leukocyte | 8.24e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.07e-18 | 2 |
abdomen blood vessel | 9.07e-18 | 2 |
sinusoid | 9.07e-18 | 2 |
abdominal segment blood vessel | 9.07e-18 | 2 |
liver parenchyma | 2.59e-12 | 3 |
liver lobule | 2.59e-12 | 3 |
hepatic duct | 2.59e-12 | 3 |
bone marrow | 1.98e-07 | 76 |
bone element | 6.33e-07 | 82 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |