FFCP PHASE1:Hg19::chr12:123590088..123590118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57605 | |EntrezGene=57605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21044 | |HGNC=21044 | ||
|TSSclassifier=strong | |||
|UniProt=A5D8U3 | |UniProt=A5D8U3 | ||
|association_with_transcript=-42bp_to_ENST00000451868,uc009zxu.1_5end | |association_with_transcript=-42bp_to_ENST00000451868,uc009zxu.1_5end | ||
|cluster_id=chr12:123590088..123590118,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_7_at_PITPNM2_5end | |description=CAGE_peak_7_at_PITPNM2_5end | ||
|id=chr12:123590088..123590118,- | |id=chr12:123590088..123590118,- | ||
|ontology_enrichment_celltype=CL:0000039!1.35e-12!7;CL:0000586!1.35e-12!7;CL:0005020!6.36e-09!6;CL:0002138!6.36e-09!6;CL:0005022!6.36e-09!6;CL:0002541!6.99e-08!3 | |ontology_enrichment_celltype=CL:0000039!1.35e-12!7;CL:0000586!1.35e-12!7;CL:0005020!6.36e-09!6;CL:0002138!6.36e-09!6;CL:0005022!6.36e-09!6;CL:0002541!6.99e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.39e-44;7!CL:0000586;5.39e-44;7!CL:0002541;4.22e-12;3!CL:0000313;1.83e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.40e-44,7;CL:0000586,5.40e-44,7;CL:0002541,3.77e-12,3;CL:0000313,1.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.29e-21;10!UBERON:0005564;2.29e-21;10!UBERON:0006215;5.89e-12;3!UBERON:0003124;1.83e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.01e-13;22!DOID:2994;1.01e-13;22!DOID:1799;7.50e-10;1!DOID:10165;7.50e-10;1!DOID:1798;7.50e-10;1!DOID:2152;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.01e-13,22;DOID:2994,1.01e-13,22;DOID:1799,8.17e-10,1;DOID:10165,8.17e-10,1;DOID:1798,8.17e-10,1;DOID:2152,1.36e-09,1;DOID:305,8.45e-08,106;DOID:0050687,1.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-10!115;UBERON:0003075!1.58e-08!86;UBERON:0007284!1.58e-08!86;UBERON:0000476!6.99e-08!3;UBERON:0000920!6.99e-08!3;UBERON:0002346!6.99e-08!90;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001896!1.72e-07!3;UBERON:0005290!1.72e-07!3;UBERON:0010096!1.72e-07!3;UBERON:0000473!2.08e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.12e-17;8!UBERON:0003135;6.54e-13;11!UBERON:0001896;4.22e-12;3!UBERON:0003124;4.22e-12;3!UBERON:0000920;4.22e-12;3!UBERON:0005290;4.22e-12;3!UBERON:0004733;2.81e-11;12!UBERON:0002028;2.81e-11;12!UBERON:0004732;2.01e-10;13!UBERON:0000991;4.23e-10;21!UBERON:0004911;1.83e-09;1!UBERON:0003133;5.30e-07;44!UBERON:0002323;5.85e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.12e-17,8;UBERON:0003135,6.54e-13,11;UBERON:0001896,3.37e-12,3;UBERON:0005290,3.37e-12,3;UBERON:0010096,3.37e-12,3;UBERON:0000920,3.77e-12,3;UBERON:0004733,2.59e-11,12;UBERON:0002028,2.59e-11,12;UBERON:0007277,2.59e-11,12;UBERON:0003124,2.77e-11,7;UBERON:0004732,1.86e-10,13;UBERON:0003133,3.07e-10,48;UBERON:0000991,3.96e-10,21;UBERON:0009196,3.96e-10,21;UBERON:0009117,3.96e-10,21;UBERON:0005564,3.96e-10,21;UBERON:0004176,1.17e-09,22;UBERON:0004911,1.36e-09,1;UBERON:0003076,4.40e-09,15;UBERON:0003057,4.40e-09,15;UBERON:0002323,2.78e-08,46;UBERON:0005156,3.93e-08,59;UBERON:0000990,3.93e-08,59;UBERON:0004458,9.99e-08,49;UBERON:0003886,6.15e-07,54 | |||
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| ||
|short_description=p7@PITPNM2 | |short_description=p7@PITPNM2 | ||
}} | }} |
Latest revision as of 01:23, 17 September 2015
Short description: | p7@PITPNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PITPNM2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -42bp_to_ENST00000451868, uc009zxu.1_5end |
EntrezGene: | PITPNM2 |
HGNC: | 21044 |
UniProt: | A5D8U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.40e-44 | 7 |
germ cell | 5.40e-44 | 7 |
chorionic membrane mesenchymal stem cell | 3.77e-12 | 3 |
serous secreting cell | 1.36e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.12e-17 | 8 |
male reproductive organ | 6.54e-13 | 11 |
medulla oblongata | 3.37e-12 | 3 |
myelencephalon | 3.37e-12 | 3 |
future myelencephalon | 3.37e-12 | 3 |
egg chorion | 3.77e-12 | 3 |
segmental subdivision of hindbrain | 2.59e-11 | 12 |
hindbrain | 2.59e-11 | 12 |
presumptive hindbrain | 2.59e-11 | 12 |
chorion | 2.77e-11 | 7 |
segmental subdivision of nervous system | 1.86e-10 | 13 |
reproductive organ | 3.07e-10 | 48 |
gonad | 3.96e-10 | 21 |
indifferent external genitalia | 3.96e-10 | 21 |
indifferent gonad | 3.96e-10 | 21 |
gonad primordium | 3.96e-10 | 21 |
external genitalia | 1.17e-09 | 22 |
epithelium of female gonad | 1.36e-09 | 1 |
posterior neural tube | 4.40e-09 | 15 |
chordal neural plate | 4.40e-09 | 15 |
body cavity | 2.78e-08 | 46 |
reproductive structure | 3.93e-08 | 59 |
reproductive system | 3.93e-08 | 59 |
body cavity or lining | 9.99e-08 | 49 |
body cavity precursor | 6.15e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.01e-13 | 22 |
germ cell cancer | 1.01e-13 | 22 |
islet cell tumor | 8.17e-10 | 1 |
endocrine pancreas cancer | 8.17e-10 | 1 |
pancreatic endocrine carcinoma | 8.17e-10 | 1 |
ovary epithelial cancer | 1.36e-09 | 1 |
carcinoma | 8.45e-08 | 106 |
cell type cancer | 1.05e-07 | 143 |