FFCP PHASE1:Hg19::chr12:13368466..13368495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13368466..13368495,+ | |||
|description=CAGE_peak_at_chr12:13368466..13368495,+ | |description=CAGE_peak_at_chr12:13368466..13368495,+ | ||
|id=chr12:13368466..13368495,+ | |id=chr12:13368466..13368495,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.07e-09!180;CL:0000057!1.01e-08!75 | |ontology_enrichment_celltype=CL:0000055!9.07e-09!180;CL:0000057!1.01e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-12;33!CL:0002057;4.35e-12;33!CL:0000473;2.03e-10;39!CL:0000234;2.03e-10;39!CL:0002570;2.01e-07;8!CL:0000135;5.15e-07;3!CL:0000388;5.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.42e-10,48;CL:0000234,3.42e-10,48;CL:0000860,1.76e-09,42;CL:0002057,1.76e-09,42;CL:0000048,2.28e-09,427;CL:0000723,5.90e-09,433;CL:0000034,2.00e-08,441;CL:0002194,4.85e-08,59;CL:0000576,4.85e-08,59;CL:0000040,4.85e-08,59;CL:0000559,4.85e-08,59;CL:0000134,1.14e-07,354;CL:0002320,1.24e-07,361;CL:0002009,1.31e-07,61;CL:0000219,2.99e-07,386;CL:0002570,3.08e-07,8;CL:0000135,4.70e-07,3;CL:0000388,4.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-07;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.92e-10!448;UBERON:0004120!2.92e-10!448;UBERON:0006603!2.92e-10!448;UBERON:0000468!1.37e-08!659;UBERON:0000467!5.58e-08!625;UBERON:0000480!7.64e-08!626;UBERON:0002204!9.16e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.17e-08;14!UBERON:0007846;5.15e-07;3!UBERON:0000043;5.15e-07;3!UBERON:0007845;5.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.04e-08,14;UBERON:0002204,7.73e-08,167;UBERON:0002384,2.21e-07,371;UBERON:0002371,4.24e-07,76;UBERON:0007846,4.70e-07,3;UBERON:0000043,4.70e-07,3;UBERON:0007845,4.70e-07,3;UBERON:0001434,4.74e-07,100;UBERON:0001474,7.46e-07,82;UBERON:0000926,8.08e-07,315;UBERON:0004120,8.08e-07,315;UBERON:0006603,8.08e-07,315 | |||
|phase1_expression=1.2717486548939,2.14100523890983,0.986680828671798,1.0007329835313,1.78784437770915,3.48935409640147,0,1.89515962028049,0,0,0,0.436882744260345,0.527533956456907,0.37129905888014,0.662794751455832,0.672325146451775,2.41077811209591,0.730310090387373,0.975865597581014,0.369363174230364,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0,2.03557534291391,1.51150377475524,0.242584061187816,0.929716147622738,0.822335776043652,1.23882548358041,6.04154023876516,2.30544635876191,1.41889337933151,2.75796544589295,0,0,1.69418105588344,0.818718450173537,1.34834090667051,3.36692281607993,0.641858054152187,0,1.64925650093358,2.39356389145958,0.852449501065388,1.16083695451434,0,1.24564449799115,13.5674279238641,3.12889751052121,1.95469960234605,1.81619850790011,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.869079113764942,0,0.486634870302636,0.0945348171640679,1.10864698731282,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0.838998872419812,1.92582629358047,0.417989933073621,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0,0.112611480483322,3.06633274931766,0,1.09921046358244,0,0,0,0.993943903390637,1.01304409331664,0,1.72101972449288,0.354668382198357,1.12135520028461,0,0.24666754841716,0.311211035399766,0.269421344139376,0.980771418680752,0.151357427644931,0,0,1.87296046098192,0,2.54062756938062,0.704606991862589,0.971237666208789,0.842704840213491,1.22492502752936,1.59684612505298,0.206651562351531,0,2.47266929278557,0,0,0.336672227908132,0.750711119231785,0.554128230968366,0,1.83892677479412,0.45071417671979,0.226864366320042,0.89694817844431,0.427114777637135,0.635795703478686,0.900273288253207,0.515262646192195,0.772921620136887,0,1.35021065793013,0.68205903612839,0,0.184099797284599,0.484938170456436,0.355009592516614,0.302256294682921,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0,0.433099343283221,1.38895653772983,0.951270761172991,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.507983154337352,0.381988425558278,2.34434894420094,0,1.7480673759565,0.901029173531752,0.857479297891735,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,0,2.535908257668,0.26593811658487,0,1.28603687131071,0,0.799266537048298,0.142977993658148,0.542621605391443,0,1.62868092146868,0,0,0,0,0,4.86495122564762,0.502257091432126,6.32501818449095,0.239624855491583,1.14861935834114,0,1.30303176000821,1.43833425785268,0.358121926479791,0,0,0,0,0,0,1.54657762555539,0.335032530668698,3.82763250991898,0,0,0,0.981531933753119,0,1.35632511849868,1.24782516918484,5.70972764150918,0.315404830067869,0.819989904948992,0.300946099727719,0,0,0,0.368738337083406,0.868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0,3.36792113319688,0.768834895534206,0.511707249066704,1.44768529029247,1.48418066444991,2.31314540703983,0.887808626565635,0.821271560138091,2.07701771673448,1.74315567689939,0,0,0.276242966807689,0.114814448164607,1.0925470080403,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,1.02056223165909,0.647747748306418,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,2.00263202249038,1.38153307253517,0.551346289938122,0.537101224341368,1.0151168573996,0.93749290157711,0.356128142586949,0,0,0,0,0,1.88887408098384,0.6970372701606,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,1.71175595213568,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,1.46228093778771,1.05650146756755,0,0.565621727814851,0,0.551365343546124,1.99031692572366,0,0.578775534266688,0,0,0,0,0,0.196498082026242,0,0.354761064070598,1.47775344708365,2.30506425071931,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,3.20472213382419,5.77487913158015,1.47024129588619,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,1.13654458722565,6.20735660317994,0.296964680832639,11.9792673818701,0,0,0.222617410045812,0.16480387422676,0.422250816255987,0.996239941255349,0,0,0.20453736500431,0,0.933118762985422,0.179736702294654,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,2.17499872630438,0,0.508507300585533,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0.697118721393016,0.3847512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| ||
|short_description=p@chr12:13368466..13368495,+ | |short_description=p@chr12:13368466..13368495,+ | ||
}} | }} |
Latest revision as of 06:59, 24 July 2015
Short description: | p@chr12:13368466..13368495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13368466..13368495, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.42e-10 | 48 |
phagocyte | 3.42e-10 | 48 |
classical monocyte | 1.76e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-09 | 42 |
multi fate stem cell | 2.28e-09 | 427 |
somatic stem cell | 5.90e-09 | 433 |
stem cell | 2.00e-08 | 441 |
monopoietic cell | 4.85e-08 | 59 |
monocyte | 4.85e-08 | 59 |
monoblast | 4.85e-08 | 59 |
promonocyte | 4.85e-08 | 59 |
mesenchymal cell | 1.14e-07 | 354 |
connective tissue cell | 1.24e-07 | 361 |
macrophage dendritic cell progenitor | 1.31e-07 | 61 |
motile cell | 2.99e-07 | 386 |
mesenchymal stem cell of adipose | 3.08e-07 | 8 |
fibrocyte | 4.70e-07 | 3 |
tendon cell | 4.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.04e-08 | 14 |
musculoskeletal system | 7.73e-08 | 167 |
connective tissue | 2.21e-07 | 371 |
bone marrow | 4.24e-07 | 76 |
dense regular connective tissue | 4.70e-07 | 3 |
tendon | 4.70e-07 | 3 |
regular connective tissue | 4.70e-07 | 3 |
skeletal system | 4.74e-07 | 100 |
bone element | 7.46e-07 | 82 |
mesoderm | 8.08e-07 | 315 |
mesoderm-derived structure | 8.08e-07 | 315 |
presumptive mesoderm | 8.08e-07 | 315 |