FFCP PHASE1:Hg19::chr12:32133462..32133466,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:32133462..32133466,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr12:32133462..32133466,+ | |description=CAGE_peak_at_chr12:32133462..32133466,+ | ||
|id=chr12:32133462..32133466,+ | |id=chr12:32133462..32133466,+ | ||
|ontology_enrichment_celltype=CL:0002087!7.31e-13!119;CL:0000738!1.57e-12!140;CL:0000037!2.01e-11!172;CL:0000566!2.01e-11!172;CL:0002032!2.46e-11!165;CL:0000837!2.46e-11!165;CL:0002031!5.26e-11!124;CL:0000988!7.82e-11!182;CL:0000766!2.92e-09!76;CL:0002194!3.89e-09!63;CL:0000576!3.89e-09!63;CL:0000040!3.89e-09!63;CL:0000559!3.89e-09!63;CL:0002009!1.60e-08!65;CL:0000839!2.63e-08!70;CL:0000860!1.24e-07!45;CL:0002057!1.43e-07!42;CL:0000763!1.84e-07!112;CL:0000049!1.84e-07!112;CL:0000557!1.87e-07!71 | |ontology_enrichment_celltype=CL:0002087!7.31e-13!119;CL:0000738!1.57e-12!140;CL:0000037!2.01e-11!172;CL:0000566!2.01e-11!172;CL:0002032!2.46e-11!165;CL:0000837!2.46e-11!165;CL:0002031!5.26e-11!124;CL:0000988!7.82e-11!182;CL:0000766!2.92e-09!76;CL:0002194!3.89e-09!63;CL:0000576!3.89e-09!63;CL:0000040!3.89e-09!63;CL:0000559!3.89e-09!63;CL:0002009!1.60e-08!65;CL:0000839!2.63e-08!70;CL:0000860!1.24e-07!45;CL:0002057!1.43e-07!42;CL:0000763!1.84e-07!112;CL:0000049!1.84e-07!112;CL:0000557!1.87e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-18;33!CL:0002057;1.02e-18;33!CL:0000473;5.86e-13;39!CL:0000234;5.86e-13;39!CL:0000775;4.15e-11;3!CL:0000094;4.55e-09;8!CL:0000576;1.03e-08;48!CL:0000785;2.12e-08;1!CL:0000819;2.12e-08;1!CL:0000766;1.42e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-15,42;CL:0002057,3.46e-15,42;CL:0000766,3.43e-14,72;CL:0000473,4.38e-13,48;CL:0000234,4.38e-13,48;CL:0000775,4.16e-11,3;CL:0000738,3.18e-10,136;CL:0002194,3.85e-10,59;CL:0000576,3.85e-10,59;CL:0000040,3.85e-10,59;CL:0000559,3.85e-10,59;CL:0002009,9.23e-10,61;CL:0000094,4.38e-09,8;CL:0000839,6.53e-09,66;CL:0000557,9.33e-09,67;CL:0000763,1.03e-08,108;CL:0000049,1.03e-08,108;CL:0002032,3.53e-08,161;CL:0000837,3.53e-08,161;CL:0000819,3.79e-08,1;CL:0002087,7.81e-08,115;CL:0000037,1.03e-07,168;CL:0002031,2.05e-07,120;CL:0000988,3.57e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.98e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.12e-08;1!DOID:8675;2.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.79e-08,1;DOID:8675,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.03e-13!115;UBERON:0002390!3.08e-11!102;UBERON:0003061!3.08e-11!102;UBERON:0002193!1.28e-10!112;UBERON:0001049!1.38e-07!57;UBERON:0005068!1.38e-07!57;UBERON:0006241!1.38e-07!57;UBERON:0007135!1.38e-07!57;UBERON:0002308!1.65e-07!9;UBERON:0000125!1.65e-07!9;UBERON:0002780!3.87e-07!41;UBERON:0001890!3.87e-07!41;UBERON:0006240!3.87e-07!41;UBERON:0000178!6.40e-07!15;UBERON:0000179!6.40e-07!15;UBERON:0000463!6.40e-07!15;UBERON:0003080!8.43e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.28e-17;15!UBERON:0000179;6.28e-17;15!UBERON:0000463;6.28e-17;15!UBERON:0001875;4.28e-15;2!UBERON:0006514;4.28e-15;2!UBERON:0002390;7.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.03e-17,15;UBERON:0000179,5.03e-17,15;UBERON:0000463,5.03e-17,15;UBERON:0002390,2.17e-15,98;UBERON:0003061,2.17e-15,98;UBERON:0001875,4.95e-15,2;UBERON:0006514,4.95e-15,2;UBERON:0002193,1.07e-13,108;UBERON:0002371,1.52e-07,76;UBERON:0001474,6.96e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0.601633342410425,0,0.447830948479849,0.32389366601898,0.515151135268373,2.03557534291391,0.755751887377619,0.727752183563449,1.16214518452842,1.6446715520873,0.619412741790207,0,0,0.236482229888585,2.06847408441971,0,1.35426486594342,1.50593871634084,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,1.50749199154046,0,0.217188844705117,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0,0.167186495390678,0,0,0,0.668462741311041,0,0,0.541607727530031,0.768547918354051,0.780356085359269,1.31550323682941,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,1.30216690771284,0.950452044448374,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0.441463099414651,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,6.74106321552464,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,3.41788312304498,1.66762242820452,1.23408681925858,0.648473311192717,1.62009431171434,3.17250070517708,0,0,0,0.371606350251437,0,0.355709216742071,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0,0.481764225311099,0.403599414382095,0,0.343505344755765,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.703347082052564,0,0.16480387422676,0.63337622438398,0,0,0.251932747854276,0,0.246169610922139,0.311039587661807,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0,0,1.02193298195737,0,0.166211681900156,0.676786981851542,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,1.094728735294,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,0.0979923974143777,0.0870592065804026,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0.407712618220842,0,0.101998217636322,0,1.20084057741958,1.50595916781192,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.202210631562555,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0.113312091520126,0,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0.414775308455192,0,0,0.327130788511688,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.413373593002368,0,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0,0.115233987555779,0.171488009437418,0.0679697329768317,0.0657727735628491,0.354581522651905,0,0,0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|short_description=p@chr12:32133462..32133466,+ | |short_description=p@chr12:32133462..32133466,+ | ||
}} | }} |
Latest revision as of 08:11, 24 July 2015
Short description: | p@chr12:32133462..32133466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:32133462..32133466, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.46e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-15 | 42 |
myeloid leukocyte | 3.43e-14 | 72 |
defensive cell | 4.38e-13 | 48 |
phagocyte | 4.38e-13 | 48 |
neutrophil | 4.16e-11 | 3 |
leukocyte | 3.18e-10 | 136 |
monopoietic cell | 3.85e-10 | 59 |
monocyte | 3.85e-10 | 59 |
monoblast | 3.85e-10 | 59 |
promonocyte | 3.85e-10 | 59 |
macrophage dendritic cell progenitor | 9.23e-10 | 61 |
granulocyte | 4.38e-09 | 8 |
myeloid lineage restricted progenitor cell | 6.53e-09 | 66 |
granulocyte monocyte progenitor cell | 9.33e-09 | 67 |
myeloid cell | 1.03e-08 | 108 |
common myeloid progenitor | 1.03e-08 | 108 |
hematopoietic oligopotent progenitor cell | 3.53e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.53e-08 | 161 |
B-1 B cell | 3.79e-08 | 1 |
nongranular leukocyte | 7.81e-08 | 115 |
hematopoietic stem cell | 1.03e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 2.05e-07 | 120 |
hematopoietic cell | 3.57e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 5.03e-17 | 15 |
haemolymphatic fluid | 5.03e-17 | 15 |
organism substance | 5.03e-17 | 15 |
hematopoietic system | 2.17e-15 | 98 |
blood island | 2.17e-15 | 98 |
globus pallidus | 4.95e-15 | 2 |
pallidum | 4.95e-15 | 2 |
hemolymphoid system | 1.07e-13 | 108 |
bone marrow | 1.52e-07 | 76 |
bone element | 6.96e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.79e-08 | 1 |
lymphosarcoma | 3.79e-08 | 1 |