FFCP PHASE1:Hg19::chr12:52911917..52911958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-181bp_to_ENST00000547890_5end | |association_with_transcript=-181bp_to_ENST00000547890_5end | ||
|cluster_id=chr12:52911917..52911958,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_2_at_KRT5_5end | |description=CAGE_peak_2_at_KRT5_5end | ||
|id=chr12:52911917..52911958,- | |id=chr12:52911917..52911958,- | ||
|ontology_enrichment_celltype=CL:0002076!2.83e-28!43;CL:0000223!4.72e-20!59;CL:0000066!1.93e-18!254;CL:0002251!4.53e-17!21;CL:0002159!1.10e-16!13;CL:0002368!2.19e-16!13;CL:0000622!3.45e-12!5;CL:0000076!9.32e-11!62;CL:0000154!4.67e-10!6;CL:0000244!1.31e-09!4;CL:0000731!1.31e-09!4;CL:0002202!3.71e-09!9;CL:0002632!3.71e-09!9;CL:0002328!4.56e-08!3;CL:0002623!5.58e-08!3;CL:0000068!7.64e-08!3;CL:0000069!7.64e-08!3;CL:0000307!7.64e-08!3;CL:0000377!7.64e-08!3;CL:0002077!1.77e-07!33;CL:0002621!1.80e-07!3;CL:0000362!1.87e-07!8;CL:0002166!1.88e-07!3;CL:0000349!4.89e-07!3;CL:0002577!4.89e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.83e-28!43;CL:0000223!4.72e-20!59;CL:0000066!1.93e-18!254;CL:0002251!4.53e-17!21;CL:0002159!1.10e-16!13;CL:0002368!2.19e-16!13;CL:0000622!3.45e-12!5;CL:0000076!9.32e-11!62;CL:0000154!4.67e-10!6;CL:0000244!1.31e-09!4;CL:0000731!1.31e-09!4;CL:0002202!3.71e-09!9;CL:0002632!3.71e-09!9;CL:0002328!4.56e-08!3;CL:0002623!5.58e-08!3;CL:0000068!7.64e-08!3;CL:0000069!7.64e-08!3;CL:0000307!7.64e-08!3;CL:0000377!7.64e-08!3;CL:0002077!1.77e-07!33;CL:0002621!1.80e-07!3;CL:0000362!1.87e-07!8;CL:0002166!1.88e-07!3;CL:0000349!4.89e-07!3;CL:0002577!4.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.88e-24;42!CL:0002368;1.29e-22;13!CL:0002159;2.96e-21;14!CL:0000622;2.59e-16;5!CL:0002251;1.04e-13;20!CL:0000154;1.59e-13;6!CL:0000244;1.17e-12;4!CL:0000731;1.17e-12;4!CL:0002202;1.61e-12;9!CL:0002632;1.61e-12;9!CL:0002328;1.36e-10;3!CL:0002623;1.72e-10;3!CL:0000307;2.58e-10;3!CL:0002166;8.73e-10;3!CL:0002621;8.73e-10;3!CL:0002077;2.13e-09;34!CL:0002577;3.64e-09;3!CL:0000240;5.83e-09;6!CL:0000311;5.83e-09;6!CL:0000079;5.83e-09;6!CL:0000237;5.83e-09;6!CL:0000362;6.02e-09;9!CL:0000150;7.21e-09;9!CL:0000349;3.69e-08;19!CL:0000575;7.13e-08;2!CL:0000317;1.61e-07;2!CL:1000448;1.61e-07;2!CL:0002308;1.61e-07;2!CL:0002140;1.61e-07;2!CL:0002327;2.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.95e-30,42;CL:0000066,1.45e-23,253;CL:0002368,1.25e-22,13;CL:0000223,2.68e-22,58;CL:0002159,3.06e-21,14;CL:0000622,2.51e-16,5;CL:0002251,1.08e-13,20;CL:0000154,1.55e-13,6;CL:0000244,9.63e-13,4;CL:0000731,9.63e-13,4;CL:0002202,1.63e-12,9;CL:0002632,1.63e-12,9;CL:0002077,9.90e-11,34;CL:0002328,1.32e-10,3;CL:0002623,1.75e-10,3;CL:0000068,2.71e-10,3;CL:0000069,2.71e-10,3;CL:0000307,2.71e-10,3;CL:0000377,2.71e-10,3;CL:0002621,8.87e-10,3;CL:0002166,9.41e-10,3;CL:0000076,1.18e-09,63;CL:0002577,3.54e-09,3;CL:0000240,5.89e-09,6;CL:0000311,5.89e-09,6;CL:0000079,5.89e-09,6;CL:0000237,5.89e-09,6;CL:0000036,5.89e-09,6;CL:0000357,5.89e-09,6;CL:0000114,5.89e-09,6;CL:0000362,5.92e-09,9;CL:0000150,7.09e-09,9;CL:0000349,3.55e-08,19;CL:0000575,7.13e-08,2;CL:0000317,1.53e-07,2;CL:1000448,1.53e-07,2;CL:0002308,1.53e-07,2;CL:0002140,1.53e-07,2;CL:0002327,2.44e-07,4;CL:0002321,7.35e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-12;58!CL:0000377;2.58e-10;3!CL:0000357;5.83e-09;6!CL:0000114;5.83e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!4.50e-18!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.55e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.40e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!9.68e-20!72;UBERON:0000166!2.14e-19!21;UBERON:0004119!2.23e-17!169;UBERON:0000925!2.23e-17!169;UBERON:0006595!2.23e-17!169;UBERON:0000161!9.21e-17!35;UBERON:0000165!1.06e-15!28;UBERON:0000930!1.06e-15!28;UBERON:0003102!3.30e-12!95;UBERON:0000365!5.29e-11!5;UBERON:0000974!5.79e-11!10;UBERON:0000065!1.43e-10!53;UBERON:0003729!2.49e-10!5;UBERON:0005631!2.80e-10!14;UBERON:0000158!2.80e-10!14;UBERON:0001444!4.79e-10!48;UBERON:0003408!2.28e-09!10;UBERON:0001044!3.43e-09!6;UBERON:0003293!3.43e-09!6;UBERON:0003294!3.43e-09!6;UBERON:0010047!3.43e-09!6;UBERON:0000167!3.43e-09!6;UBERON:0007196!3.94e-09!14;UBERON:0001558!3.94e-09!14;UBERON:0005910!4.37e-09!6;UBERON:0000077!4.63e-09!130;UBERON:0001007!6.22e-09!155;UBERON:0001555!6.22e-09!155;UBERON:0007026!6.22e-09!155;UBERON:0001987!2.25e-08!4;UBERON:0004340!2.25e-08!4;UBERON:0003343!2.64e-08!4;UBERON:0004785!2.64e-08!4;UBERON:0004815!4.56e-08!3;UBERON:0002031!4.56e-08!3;UBERON:0000078!6.16e-08!18;UBERON:0006562!1.06e-07!11;UBERON:0003126!1.23e-07!7;UBERON:0001005!1.23e-07!7;UBERON:0000072!1.60e-07!46;UBERON:0001949!1.80e-07!3;UBERON:0000344!2.77e-07!12;UBERON:0003124!4.82e-07!7;UBERON:0004921!6.02e-07!129;UBERON:0004185!6.02e-07!129;UBERON:0001723!8.20e-07!3;UBERON:0001033!8.20e-07!3;UBERON:0010056!8.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.46e-13;28!UBERON:0000486;1.26e-11;12!UBERON:0000161;2.21e-11;19!UBERON:0000166;2.21e-11;19!UBERON:0004815;1.36e-10;3!UBERON:0002031;1.36e-10;3!UBERON:0000365;3.98e-10;5!UBERON:0001949;8.73e-10;3!UBERON:0001044;1.69e-08;6!UBERON:0003293;1.69e-08;6!UBERON:0003294;1.69e-08;6!UBERON:0010047;1.69e-08;6!UBERON:0003408;1.69e-08;6!UBERON:0000167;1.69e-08;6!UBERON:0005910;1.95e-08;6!UBERON:0003729;7.70e-08;13!UBERON:0000478;8.11e-08;24!UBERON:0002419;1.61e-07;2!UBERON:0007771;1.61e-07;2!UBERON:0003297;1.61e-07;2!UBERON:0001821;1.61e-07;2!UBERON:0003487;1.61e-07;2!UBERON:0001820;1.61e-07;2!UBERON:0001041;1.84e-07;14!UBERON:0001708;1.98e-07;4!UBERON:0008895;1.98e-07;4!UBERON:0001911;2.31e-07;4!UBERON:0007196;3.47e-07;15!UBERON:0001558;3.47e-07;15!UBERON:0001003;4.46e-07;15!UBERON:0007376;4.46e-07;15!UBERON:0001987;5.66e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.37e-14,22;UBERON:0003102,3.79e-14,99;UBERON:0001004,6.60e-13,74;UBERON:0000165,2.00e-12,29;UBERON:0000930,2.00e-12,29;UBERON:0004119,4.36e-12,160;UBERON:0000925,4.36e-12,160;UBERON:0006595,4.36e-12,160;UBERON:0000033,1.43e-11,56;UBERON:0005631,1.47e-11,14;UBERON:0000158,1.47e-11,14;UBERON:0000161,3.26e-11,36;UBERON:0004815,1.32e-10,3;UBERON:0002031,1.32e-10,3;UBERON:0000365,3.41e-10,5;UBERON:0000153,4.74e-10,62;UBERON:0007811,4.74e-10,62;UBERON:0001949,8.87e-10,3;UBERON:0001444,5.12e-09,49;UBERON:0005910,1.72e-08,6;UBERON:0001044,1.83e-08,6;UBERON:0003293,1.83e-08,6;UBERON:0003294,1.83e-08,6;UBERON:0010047,1.83e-08,6;UBERON:0000167,1.83e-08,6;UBERON:0000478,7.85e-08,24;UBERON:0003729,7.85e-08,13;UBERON:0002419,1.53e-07,2;UBERON:0007771,1.53e-07,2;UBERON:0003297,1.53e-07,2;UBERON:0001821,1.53e-07,2;UBERON:0003487,1.53e-07,2;UBERON:0001820,1.53e-07,2;UBERON:0005089,1.53e-07,2;UBERON:0005088,1.53e-07,2;UBERON:0001708,2.09e-07,4;UBERON:0008895,2.09e-07,4;UBERON:0001911,2.44e-07,4;UBERON:0005333,2.44e-07,4;UBERON:0008425,2.44e-07,4;UBERON:0005311,2.44e-07,4;UBERON:0007196,3.49e-07,15;UBERON:0001558,3.49e-07,15;UBERON:0001003,4.46e-07,15;UBERON:0007376,4.46e-07,15;UBERON:0007383,4.46e-07,15;UBERON:0001987,5.54e-07,4;UBERON:0004340,5.54e-07,4 | |||
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|short_description=p2@KRT5 | |short_description=p2@KRT5 | ||
}} | }} |
Latest revision as of 23:36, 18 September 2015
Short description: | p2@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -181bp_to_ENST00000547890_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.40e-11 | 14 |