FFCP PHASE1:Hg19::chr12:53495961..53495967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53495961..53495967,- | |||
|description=CAGE_peak_at_chr12:53495961..53495967,- | |description=CAGE_peak_at_chr12:53495961..53495967,- | ||
|id=chr12:53495961..53495967,- | |id=chr12:53495961..53495967,- | ||
|ontology_enrichment_celltype=CL:0000055!2.66e-21!180;CL:0000057!1.62e-14!75;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000187!5.36e-13!54;CL:0000183!4.81e-11!59;CL:0000393!1.07e-10!60;CL:0000211!1.07e-10!60;CL:0000192!6.68e-09!42;CL:0000514!6.68e-09!42;CL:0002620!7.10e-08!23;CL:0000222!4.78e-07!119 | |ontology_enrichment_celltype=CL:0000055!2.66e-21!180;CL:0000057!1.62e-14!75;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000187!5.36e-13!54;CL:0000183!4.81e-11!59;CL:0000393!1.07e-10!60;CL:0000211!1.07e-10!60;CL:0000192!6.68e-09!42;CL:0000514!6.68e-09!42;CL:0002620!7.10e-08!23;CL:0000222!4.78e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.11e-15;3!CL:0000388;1.11e-15;3!CL:0002600;2.03e-10;2!CL:0000214;5.78e-08;3!CL:0000499;8.20e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.38e-16,3;CL:0000388,9.38e-16,3;CL:0002600,2.04e-10,2;CL:0000057,4.98e-08,76;CL:0000214,5.71e-08,3;CL:0000499,7.54e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.23e-12!63;UBERON:0001015!3.23e-12!63;UBERON:0000383!3.23e-12!63;UBERON:0001134!4.35e-12!61;UBERON:0002036!4.35e-12!61;UBERON:0003082!4.35e-12!61;UBERON:0004290!8.49e-12!70;UBERON:0000486!7.23e-11!82;UBERON:0000914!1.16e-10!83;UBERON:0002329!1.16e-10!83;UBERON:0003077!1.16e-10!83;UBERON:0003059!1.16e-10!83;UBERON:0007282!1.16e-10!83;UBERON:0009618!1.16e-10!83;UBERON:0007285!1.16e-10!83;UBERON:0002100!2.11e-07!216;UBERON:0003102!3.31e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.11e-15;3!UBERON:0000043;1.11e-15;3!UBERON:0007845;1.11e-15;3!UBERON:0004905;3.73e-10;8!UBERON:0000982;3.73e-10;8!UBERON:0004770;3.73e-10;8!UBERON:0006915;5.78e-08;3!UBERON:0007616;5.78e-08;3!UBERON:0002217;5.78e-08;3!UBERON:0002018;5.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.38e-16,3;UBERON:0000043,9.38e-16,3;UBERON:0007845,9.38e-16,3;UBERON:0004905,2.53e-10,8;UBERON:0000982,2.53e-10,8;UBERON:0004770,2.53e-10,8;UBERON:0006915,5.71e-08,3;UBERON:0007616,5.71e-08,3;UBERON:0002217,5.71e-08,3;UBERON:0002018,5.71e-08,3 | |||
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|short_description=p@chr12:53495961..53495967,- | |short_description=p@chr12:53495961..53495967,- | ||
}} | }} |
Latest revision as of 09:46, 24 July 2015
Short description: | p@chr12:53495961..53495967, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53495961..53495967, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.38e-16 | 3 |
tendon cell | 9.38e-16 | 3 |
smooth muscle cell of trachea | 2.04e-10 | 2 |
fibroblast | 4.98e-08 | 76 |
synovial cell | 5.71e-08 | 3 |
stromal cell | 7.54e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.38e-16 | 3 |
tendon | 9.38e-16 | 3 |
regular connective tissue | 9.38e-16 | 3 |
articulation | 2.53e-10 | 8 |
skeletal joint | 2.53e-10 | 8 |
articular system | 2.53e-10 | 8 |
stratified squamous epithelium | 5.71e-08 | 3 |
layer of synovial tissue | 5.71e-08 | 3 |
synovial joint | 5.71e-08 | 3 |
synovial membrane of synovial joint | 5.71e-08 | 3 |