FFCP PHASE1:Hg19::chr12:56078416..56078434,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56078416..56078434,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_at_chr12:56078416..56078434,- | |description=CAGE_peak_at_chr12:56078416..56078434,- | ||
|id=chr12:56078416..56078434,- | |id=chr12:56078416..56078434,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.40e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-21!115;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0001049!1.47e-12!57;UBERON:0005068!1.47e-12!57;UBERON:0006241!1.47e-12!57;UBERON:0007135!1.47e-12!57;UBERON:0002346!3.01e-12!90;UBERON:0003075!3.81e-12!86;UBERON:0007284!3.81e-12!86;UBERON:0002616!6.12e-12!59;UBERON:0002791!1.71e-11!33;UBERON:0002780!2.49e-11!41;UBERON:0001890!2.49e-11!41;UBERON:0006240!2.49e-11!41;UBERON:0001893!4.74e-11!34;UBERON:0003080!5.85e-11!42;UBERON:0005743!7.38e-11!86;UBERON:0001017!1.26e-10!82;UBERON:0000956!1.55e-10!25;UBERON:0000203!1.55e-10!25;UBERON:0001869!2.36e-10!32;UBERON:0000073!3.39e-09!94;UBERON:0001016!3.39e-09!94;UBERON:0000955!3.49e-09!69;UBERON:0006238!3.49e-09!69;UBERON:0002619!1.14e-08!22;UBERON:0003056!3.56e-08!61;UBERON:0003978!8.61e-08!3;UBERON:0009751!8.61e-08!3;UBERON:0000946!8.61e-08!3;UBERON:0002523!8.61e-08!3;UBERON:0005983!8.61e-08!3;UBERON:0002165!8.61e-08!3;UBERON:0002062!8.61e-08!3;UBERON:0007280!8.61e-08!3;UBERON:0000349!1.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.81e-40;1!UBERON:0000026;1.81e-40;1!UBERON:0008784;1.81e-40;1!UBERON:0006058;1.81e-40;1!UBERON:0003663;1.81e-40;1!UBERON:0004256;1.81e-40;1!UBERON:0004708;1.81e-40;1!UBERON:0002101;1.81e-40;1!UBERON:0004709;1.81e-40;1!UBERON:0002529;1.81e-40;1!UBERON:0010538;1.81e-40;1!UBERON:0003661;1.81e-40;1!UBERON:0010890;1.81e-40;1!UBERON:0002471;1.81e-40;1!UBERON:0001383;1.81e-40;1!UBERON:0010758;1.81e-40;1!UBERON:0010707;1.81e-40;1!UBERON:0000978;1.81e-40;1!UBERON:0002103;1.81e-40;1!UBERON:0001665;1.81e-40;1!UBERON:0003823;1.81e-40;1!UBERON:0000154;1.81e-40;1!UBERON:0010709;1.81e-40;1!UBERON:0005090;5.15e-21;2!UBERON:0001630;5.15e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.48e-40,1;UBERON:0001389,1.48e-40,1;UBERON:0000026,1.48e-40,1;UBERON:0008784,1.48e-40,1;UBERON:0006058,1.48e-40,1;UBERON:0003663,1.48e-40,1;UBERON:0004256,1.48e-40,1;UBERON:0004708,1.48e-40,1;UBERON:0002101,1.48e-40,1;UBERON:0004709,1.48e-40,1;UBERON:0002529,1.48e-40,1;UBERON:0010538,1.48e-40,1;UBERON:0003661,1.48e-40,1;UBERON:0010890,1.48e-40,1;UBERON:0002471,1.48e-40,1;UBERON:0001383,1.48e-40,1;UBERON:0004357,1.48e-40,1;UBERON:0004347,1.48e-40,1;UBERON:0005420,1.48e-40,1;UBERON:0005732,1.48e-40,1;UBERON:0010758,1.48e-40,1;UBERON:0010707,1.48e-40,1;UBERON:0000978,1.48e-40,1;UBERON:0002103,1.48e-40,1;UBERON:0001665,1.48e-40,1;UBERON:0003823,1.48e-40,1;UBERON:0000154,1.48e-40,1;UBERON:0010709,1.48e-40,1;UBERON:0005733,1.48e-40,1;UBERON:0005730,1.48e-40,1;UBERON:0005090,4.66e-21,2;UBERON:0001630,4.66e-21,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,1.16495949527454,0,0,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,12.5604746759786,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0.197318320688547,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,1.16495949527454,0,0,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,12.5604746759786,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0.197318320688547,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr12:56078416..56078434,- | |short_description=p@chr12:56078416..56078434,- | ||
}} | }} |
Latest revision as of 10:09, 24 July 2015
Short description: | p@chr12:56078416..56078434, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56078416..56078434, - |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.48e-40 | 1 |
soleus muscle | 1.48e-40 | 1 |
appendage | 1.48e-40 | 1 |
lower limb segment | 1.48e-40 | 1 |
multi-limb segment region | 1.48e-40 | 1 |
hindlimb muscle | 1.48e-40 | 1 |
hindlimb zeugopod muscle | 1.48e-40 | 1 |
paired limb/fin | 1.48e-40 | 1 |
limb | 1.48e-40 | 1 |
pelvic appendage | 1.48e-40 | 1 |
limb segment | 1.48e-40 | 1 |
paired limb/fin segment | 1.48e-40 | 1 |
limb muscle | 1.48e-40 | 1 |
pelvic complex muscle | 1.48e-40 | 1 |
zeugopod | 1.48e-40 | 1 |
muscle of leg | 1.48e-40 | 1 |
paired limb/fin bud | 1.48e-40 | 1 |
limb bud | 1.48e-40 | 1 |
pelvic appendage bud | 1.48e-40 | 1 |
limb/fin field | 1.48e-40 | 1 |
subdivision of organism along appendicular axis | 1.48e-40 | 1 |
appendage girdle complex | 1.48e-40 | 1 |
leg | 1.48e-40 | 1 |
hindlimb | 1.48e-40 | 1 |
triceps surae | 1.48e-40 | 1 |
hindlimb zeugopod | 1.48e-40 | 1 |
posterior region of body | 1.48e-40 | 1 |
pelvic complex | 1.48e-40 | 1 |
limb field | 1.48e-40 | 1 |
hindlimb/pelvic fin field | 1.48e-40 | 1 |
muscle structure | 4.66e-21 | 2 |
muscle organ | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.11e-21 | 2 |