FFCP PHASE1:Mm9::chr1:123358811..123358824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:123358811..123358824,+ | |||
|description=CAGE_peak_at_chr1:123358811..123358824,+ | |description=CAGE_peak_at_chr1:123358811..123358824,+ | ||
|id=chr1:123358811..123358824,+ | |id=chr1:123358811..123358824,+ | ||
|ontology_enrichment_celltype=CL:0000553!6.37e-14!6;CL:0000556!6.37e-14!6;CL:0000839!2.94e-10!13;CL:0000988!4.22e-09!32;CL:0002032!4.22e-09!32;CL:0000037!4.22e-09!32;CL:0000566!4.22e-09!32;CL:0000837!4.22e-09!32;CL:0002031!4.66e-09!25;CL:0000050!5.70e-09!9;CL:0000049!4.75e-08!19;CL:0000763!4.93e-08!16;CL:0002027!2.06e-07!3;CL:0002006!2.06e-07!3;CL:0002024!2.06e-07!3;CL:0000414!3.58e-07!11 | |ontology_enrichment_celltype=CL:0000553!6.37e-14!6;CL:0000556!6.37e-14!6;CL:0000839!2.94e-10!13;CL:0000988!4.22e-09!32;CL:0002032!4.22e-09!32;CL:0000037!4.22e-09!32;CL:0000566!4.22e-09!32;CL:0000837!4.22e-09!32;CL:0002031!4.66e-09!25;CL:0000050!5.70e-09!9;CL:0000049!4.75e-08!19;CL:0000763!4.93e-08!16;CL:0002027!2.06e-07!3;CL:0002006!2.06e-07!3;CL:0002024!2.06e-07!3;CL:0000414!3.58e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.72e-24,6;CL:0000556,3.72e-24,6;CL:0002031,4.38e-17,25;CL:0000050,2.96e-16,9;CL:0000988,2.66e-13,32;CL:0002032,2.66e-13,32;CL:0000037,2.66e-13,32;CL:0000837,2.66e-13,32;CL:0000839,2.28e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.69e-09,16;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0000049,7.13e-08,19;CL:0000219,9.36e-08,54;CL:0000838,3.68e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.34e-09!48;UBERON:0002371!4.93e-08!16;UBERON:0002390!1.80e-07!45;UBERON:0003061!1.80e-07!45;UBERON:0001474!9.55e-07!22;UBERON:0004765!9.55e-07!22;UBERON:0001434!9.55e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.04e-10,1;UBERON:0001097,3.04e-10,1;UBERON:0003968,3.04e-10,1;UBERON:0001467,3.04e-10,1;UBERON:0002371,2.69e-09,16;UBERON:0002384,3.64e-09,46;UBERON:0002193,9.61e-09,48;UBERON:0002405,9.61e-09,48;UBERON:0002390,6.27e-07,45;UBERON:0003061,6.27e-07,45;UBERON:0001474,7.81e-07,22;UBERON:0004765,7.81e-07,22;UBERON:0001434,7.81e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.41732687172878,0.699561878128147,8.83294063003066,9.59801035240171,9.76096199135469,0.0850432901510698,2.28369187762036,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,1.77702496037333,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.41732687172878,0.699561878128147,8.83294063003066,9.59801035240171,9.76096199135469,0.0850432901510698,2.28369187762036,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81931657357869,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,1.77702496037333,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:123358811..123358824,+ | |short_description=p@chr1:123358811..123358824,+ | ||
}} | }} |
Latest revision as of 16:16, 4 August 2015
Short description: | p@chr1:123358811..123358824, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:123358811..123358824, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.72e-24 | 6 |
megakaryocyte | 3.72e-24 | 6 |
hematopoietic lineage restricted progenitor cell | 4.38e-17 | 25 |
megakaryocyte-erythroid progenitor cell | 2.96e-16 | 9 |
hematopoietic cell | 2.66e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.66e-13 | 32 |
hematopoietic stem cell | 2.66e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.66e-13 | 32 |
myeloid lineage restricted progenitor cell | 2.28e-11 | 13 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
myeloid cell | 2.69e-09 | 16 |
connective tissue cell | 3.64e-09 | 46 |
mesenchymal cell | 3.64e-09 | 46 |
common myeloid progenitor | 7.13e-08 | 19 |
motile cell | 9.36e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.04e-10 | 1 |
axillary lymph node | 3.04e-10 | 1 |
peripheral lymph node | 3.04e-10 | 1 |
shoulder | 3.04e-10 | 1 |
bone marrow | 2.69e-09 | 16 |
connective tissue | 3.64e-09 | 46 |
hemolymphoid system | 9.61e-09 | 48 |
immune system | 9.61e-09 | 48 |
hematopoietic system | 6.27e-07 | 45 |
blood island | 6.27e-07 | 45 |
bone element | 7.81e-07 | 22 |
skeletal element | 7.81e-07 | 22 |
skeletal system | 7.81e-07 | 22 |