FFCP PHASE1:Hg19::chr12:70944095..70944107,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:70944095..70944107,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_at_chr12:70944095..70944107,+ | |description=CAGE_peak_at_chr12:70944095..70944107,+ | ||
|id=chr12:70944095..70944107,+ | |id=chr12:70944095..70944107,+ | ||
|ontology_enrichment_celltype=CL:0002548!9.01e-08!6;CL:0002494!2.95e-07!16 | |ontology_enrichment_celltype=CL:0002548!9.01e-08!6;CL:0002494!2.95e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.19e-07;3!CL:0000746;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.19e-07,3;CL:0000746,2.97e-07,3;CL:0000513,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.30e-19;1!UBERON:0000358;3.57e-19;1!UBERON:0004140;3.57e-19;1!UBERON:0005062;3.57e-19;4!UBERON:0007284;3.57e-19;4!CL:0000513;2.88e-07;3 | |||
|ontology_enrichment_disease=DOID:114!6.41e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.98e-37;2!DOID:178;1.88e-19;1!DOID:326;1.88e-19;1!DOID:3978;1.88e-19;1!DOID:3394;1.88e-19;1!DOID:5844;1.88e-19;1!DOID:1287;5.90e-19;4!DOID:3493;1.89e-10;2!DOID:4556;1.82e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.20e-37,2;DOID:178,1.88e-19,1;DOID:326,1.88e-19,1;DOID:3978,1.88e-19,1;DOID:3394,1.88e-19,1;DOID:5844,1.88e-19,1;DOID:1287,5.64e-19,4;DOID:3493,1.89e-10,2;DOID:4556,1.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007100!9.29e-32!27;UBERON:0000948!4.67e-22!24;UBERON:0005498!4.67e-22!24;UBERON:0004140!4.67e-22!24;UBERON:0009881!4.67e-22!24;UBERON:0004141!4.67e-22!24;UBERON:0003084!4.67e-22!24;UBERON:0007005!4.67e-22!24;UBERON:0004139!4.67e-22!24;UBERON:0004291!4.67e-22!24;UBERON:0001950!2.17e-19!20;UBERON:0002619!1.53e-17!22;UBERON:0007023!3.35e-17!115;UBERON:0001869!7.98e-17!32;UBERON:0001893!1.01e-15!34;UBERON:0000956!2.64e-15!25;UBERON:0000203!2.64e-15!25;UBERON:0003978!3.76e-15!3;UBERON:0009751!3.76e-15!3;UBERON:0000946!3.76e-15!3;UBERON:0002523!3.76e-15!3;UBERON:0005983!3.76e-15!3;UBERON:0002165!3.76e-15!3;UBERON:0002062!3.76e-15!3;UBERON:0007280!3.76e-15!3;UBERON:0002791!1.24e-13!33;UBERON:0002020!3.50e-13!34;UBERON:0003528!3.50e-13!34;UBERON:0002780!1.06e-12!41;UBERON:0001890!1.06e-12!41;UBERON:0006240!1.06e-12!41;UBERON:0003075!1.38e-12!86;UBERON:0007284!1.38e-12!86;UBERON:0003080!2.38e-12!42;UBERON:0000025!3.07e-12!194;UBERON:0000200!3.73e-12!6;UBERON:0003103!3.88e-12!69;UBERON:0002346!7.39e-12!90;UBERON:0002081!4.35e-11!2;UBERON:0002133!5.03e-11!2;UBERON:0003056!2.65e-09!61;UBERON:0001872!1.12e-08!5;UBERON:0004111!1.17e-08!241;UBERON:0001049!1.50e-08!57;UBERON:0005068!1.50e-08!57;UBERON:0006241!1.50e-08!57;UBERON:0007135!1.50e-08!57;UBERON:0002342!3.13e-08!14;UBERON:0005062!3.13e-08!14;UBERON:0002616!3.45e-08!59;UBERON:0000955!8.19e-08!69;UBERON:0006238!8.19e-08!69;UBERON:0004151!1.18e-07!3;UBERON:0004145!2.02e-07!3;UBERON:0001017!2.44e-07!82;UBERON:0002771!3.44e-07!3;UBERON:0000477!4.49e-07!286;UBERON:0005743!6.99e-07!86;UBERON:0000483!9.85e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.35e-45;25!UBERON:0002081;1.89e-37;2!UBERON:0002133;3.28e-37;2!UBERON:0000948;3.06e-29;22!UBERON:0004151;2.34e-25;3!UBERON:0003978;3.38e-25;3!UBERON:0000946;3.38e-25;3!UBERON:0002134;1.08e-19;1!UBERON:0005208;1.08e-19;1!UBERON:0004145;1.08e-19;1!UBERON:0005946;1.08e-19;1!UBERON:0005965;1.08e-19;1!UBERON:0002078;1.08e-19;1!UBERON:0002079;1.30e-19;1!UBERON:0002135;2.25e-19;1!UBERON:0003103;4.92e-10;61!UBERON:0010313;3.03e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.12e-42,27;UBERON:0002081,1.89e-37,2;UBERON:0010227,1.89e-37,2;UBERON:0002133,3.28e-37,2;UBERON:0000948,7.91e-27,24;UBERON:0005498,7.91e-27,24;UBERON:0004140,7.91e-27,24;UBERON:0009881,7.91e-27,24;UBERON:0004141,7.91e-27,24;UBERON:0003084,7.91e-27,24;UBERON:0007005,7.91e-27,24;UBERON:0004139,7.91e-27,24;UBERON:0004291,7.91e-27,24;UBERON:0004151,2.34e-25,3;UBERON:0003978,3.38e-25,3;UBERON:0009751,3.38e-25,3;UBERON:0000946,3.38e-25,3;UBERON:0002523,3.38e-25,3;UBERON:0005983,3.38e-25,3;UBERON:0002165,3.38e-25,3;UBERON:0002062,3.38e-25,3;UBERON:0007280,3.38e-25,3;UBERON:0002134,1.08e-19,1;UBERON:0005208,1.08e-19,1;UBERON:0005946,1.08e-19,1;UBERON:0005965,1.08e-19,1;UBERON:0002078,1.08e-19,1;UBERON:0002079,1.30e-19,1;UBERON:0002135,2.25e-19,1;UBERON:0003103,1.70e-16,68;UBERON:0004797,2.18e-11,7;UBERON:0001009,7.87e-10,112;UBERON:0010313,3.03e-08,10;UBERON:0002342,3.03e-08,10;UBERON:0005062,3.03e-08,10;UBERON:0004872,1.13e-07,83;UBERON:0004145,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,1.75123873690594,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.229160424011684,11.485968393229,5.19165401297377,2.57535628881943,0.223171457441873,2.75452237195578,0,0,0.945398187686684,0.824158583811665,0.471824806979294,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,64.5434421598241,0,10.7204298956005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876336514945499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77236611945176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,1.75123873690594,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.229160424011684,11.485968393229,5.19165401297377,2.57535628881943,0.223171457441873,2.75452237195578,0,0,0.945398187686684,0.824158583811665,0.471824806979294,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,64.5434421598241,0,10.7204298956005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876336514945499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77236611945176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr12:70944095..70944107,+ | |short_description=p@chr12:70944095..70944107,+ | ||
}} | }} |
Latest revision as of 12:07, 24 July 2015
Short description: | p@chr12:70944095..70944107, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:70944095..70944107, + |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.19e-07 | 3 |
cardiac muscle cell | 2.97e-07 | 3 |
cardiac muscle myoblast | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.20e-37 | 2 |
vascular disease | 1.88e-19 | 1 |
ischemia | 1.88e-19 | 1 |
extrinsic cardiomyopathy | 1.88e-19 | 1 |
myocardial ischemia | 1.88e-19 | 1 |
myocardial infarction | 1.88e-19 | 1 |
cardiovascular system disease | 5.64e-19 | 4 |
signet ring cell adenocarcinoma | 1.89e-10 | 2 |
lung large cell carcinoma | 1.82e-07 | 3 |