FFCP PHASE1:Hg19::chr12:9804148..9804152,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9804148..9804152,- | |||
|description=CAGE_peak_at_chr12:9804148..9804152,- | |description=CAGE_peak_at_chr12:9804148..9804152,- | ||
|id=chr12:9804148..9804152,- | |id=chr12:9804148..9804152,- | ||
|ontology_enrichment_celltype=CL:0000542!4.62e-43!53;CL:0000051!4.62e-43!53;CL:0000838!2.97e-41!52;CL:0002032!9.66e-30!165;CL:0000837!9.66e-30!165;CL:0000988!1.39e-29!182;CL:0000037!6.45e-28!172;CL:0000566!6.45e-28!172;CL:0002087!3.81e-26!119;CL:0000738!2.29e-25!140;CL:0002031!1.72e-24!124;CL:0000945!2.37e-21!24;CL:0000826!2.37e-21!24;CL:0000084!2.74e-18!25;CL:0000827!2.74e-18!25;CL:0000625!3.83e-17!11;CL:0000791!4.81e-17!18;CL:0000789!4.81e-17!18;CL:0002420!4.81e-17!18;CL:0002419!4.81e-17!18;CL:0000790!4.81e-17!18;CL:0000236!6.81e-13!14;CL:0000134!3.90e-07!358;CL:0002320!9.44e-07!365 | |ontology_enrichment_celltype=CL:0000542!4.62e-43!53;CL:0000051!4.62e-43!53;CL:0000838!2.97e-41!52;CL:0002032!9.66e-30!165;CL:0000837!9.66e-30!165;CL:0000988!1.39e-29!182;CL:0000037!6.45e-28!172;CL:0000566!6.45e-28!172;CL:0002087!3.81e-26!119;CL:0000738!2.29e-25!140;CL:0002031!1.72e-24!124;CL:0000945!2.37e-21!24;CL:0000826!2.37e-21!24;CL:0000084!2.74e-18!25;CL:0000827!2.74e-18!25;CL:0000625!3.83e-17!11;CL:0000791!4.81e-17!18;CL:0000789!4.81e-17!18;CL:0002420!4.81e-17!18;CL:0002419!4.81e-17!18;CL:0000790!4.81e-17!18;CL:0000236!6.81e-13!14;CL:0000134!3.90e-07!358;CL:0002320!9.44e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000785;4.66e-21;1!CL:0000819;4.66e-21;1!CL:0000542;3.58e-17;53!CL:0000625;6.18e-17;11!CL:0000236;2.43e-14;13!CL:0000945;1.27e-13;24!CL:0000084;4.28e-13;25!CL:0000791;1.30e-10;18!CL:0000789;1.30e-10;18!CL:0002419;1.30e-10;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.17e-24,52;CL:0000542,1.20e-23,53;CL:0000051,1.20e-23,53;CL:0000819,3.45e-21,1;CL:0000625,5.12e-17,11;CL:0000945,1.15e-13,24;CL:0000826,1.15e-13,24;CL:0000236,1.98e-13,14;CL:0000084,4.15e-13,25;CL:0000827,4.15e-13,25;CL:0000785,2.73e-11,2;CL:0000955,2.73e-11,2;CL:0000818,2.73e-11,2;CL:0000954,2.73e-11,2;CL:0000816,2.73e-11,2;CL:0000791,1.16e-10,18;CL:0000789,1.16e-10,18;CL:0002420,1.16e-10,18;CL:0002419,1.16e-10,18;CL:0000790,1.16e-10,18;CL:0002087,1.23e-10,115;CL:0002031,3.52e-10,120;CL:0002032,1.69e-09,161;CL:0000837,1.69e-09,161;CL:0000037,4.41e-09,168;CL:0000738,6.11e-09,136;CL:0000988,1.35e-08,177;CL:0000817,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.58e-17;53!CL:0000954;3.18e-11;2!CL:0000790;1.30e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!1.44e-11!51;DOID:0060083!1.44e-11!51;DOID:0060058!7.45e-08!10;DOID:1240!4.37e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.69e-21;1!DOID:0070004;1.69e-21;1!DOID:0060073;4.66e-21;1!DOID:8675;4.66e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.88e-21,1;DOID:0070004,1.88e-21,1;DOID:0060073,3.45e-21,1;DOID:8675,3.45e-21,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:9804148..9804152,- | |short_description=p@chr12:9804148..9804152,- | ||
}} | }} |
Latest revision as of 14:00, 24 July 2015
Short description: | p@chr12:9804148..9804152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9804148..9804152, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.17e-24 | 52 |
lymphocyte | 1.20e-23 | 53 |
common lymphoid progenitor | 1.20e-23 | 53 |
B-1 B cell | 3.45e-21 | 1 |
CD8-positive, alpha-beta T cell | 5.12e-17 | 11 |
lymphocyte of B lineage | 1.15e-13 | 24 |
pro-B cell | 1.15e-13 | 24 |
B cell | 1.98e-13 | 14 |
T cell | 4.15e-13 | 25 |
pro-T cell | 4.15e-13 | 25 |
mature B cell | 2.73e-11 | 2 |
pre-B-II cell | 2.73e-11 | 2 |
transitional stage B cell | 2.73e-11 | 2 |
small pre-B-II cell | 2.73e-11 | 2 |
immature B cell | 2.73e-11 | 2 |
mature alpha-beta T cell | 1.16e-10 | 18 |
alpha-beta T cell | 1.16e-10 | 18 |
immature T cell | 1.16e-10 | 18 |
mature T cell | 1.16e-10 | 18 |
immature alpha-beta T cell | 1.16e-10 | 18 |
nongranular leukocyte | 1.23e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.69e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-09 | 161 |
hematopoietic stem cell | 4.41e-09 | 168 |
leukocyte | 6.11e-09 | 136 |
hematopoietic cell | 1.35e-08 | 177 |
precursor B cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.88e-21 | 1 |
myeloma | 1.88e-21 | 1 |
lymphatic system cancer | 3.45e-21 | 1 |
lymphosarcoma | 3.45e-21 | 1 |