FFCP PHASE1:Mm9::chr11:4841397..4841408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=602 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:4841397..4841408,- | |||
|description=CAGE_peak_at_chr11:4841397..4841408,- | |description=CAGE_peak_at_chr11:4841397..4841408,- | ||
|id=chr11:4841397..4841408,- | |id=chr11:4841397..4841408,- | ||
|ontology_enrichment_celltype=CL:0000117!7.30e-10!23;CL:0000337!7.30e-10!23;CL:0002612!1.13e-09!3;CL:0000540!8.07e-08!33;CL:0000047!8.07e-08!33;CL:0000031!8.07e-08!33;CL:0000404!8.07e-08!33;CL:0002611!1.44e-07!2 | |ontology_enrichment_celltype=CL:0000117!7.30e-10!23;CL:0000337!7.30e-10!23;CL:0002612!1.13e-09!3;CL:0000540!8.07e-08!33;CL:0000047!8.07e-08!33;CL:0000031!8.07e-08!33;CL:0000404!8.07e-08!33;CL:0002611!1.44e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.59e-20,3;CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0000540,1.59e-11,33;CL:0000047,1.59e-11,33;CL:0000031,1.59e-11,33;CL:0000404,1.59e-11,33;CL:0000393,8.12e-10,39;CL:0000211,8.12e-10,39;CL:0002319,6.12e-09,43;CL:0000221,9.58e-09,44;CL:0000133,9.58e-09,44;CL:0002611,1.53e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.92e-20!52;UBERON:0005068!5.92e-20!52;UBERON:0006241!5.92e-20!52;UBERON:0007135!5.92e-20!52;UBERON:0002240!1.38e-18!6;UBERON:0005174!1.38e-18!6;UBERON:0001137!1.38e-18!6;UBERON:0001017!3.50e-18!73;UBERON:0005743!3.50e-18!73;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001948!1.33e-15!5;UBERON:0002315!1.33e-15!5;UBERON:0003076!1.38e-15!12;UBERON:0003057!1.38e-15!12;UBERON:0002346!4.37e-15!71;UBERON:0003075!4.37e-15!71;UBERON:0007284!4.37e-15!71;UBERON:0002616!4.36e-13!49;UBERON:0002298!4.70e-13!6;UBERON:0002020!4.92e-13!34;UBERON:0004121!5.85e-13!102;UBERON:0000924!5.85e-13!102;UBERON:0006601!5.85e-13!102;UBERON:0000955!9.32e-13!50;UBERON:0006238!9.32e-13!50;UBERON:0000033!9.43e-11!63;UBERON:0002257!1.13e-09!3;UBERON:0003080!7.43e-09!40;UBERON:0007811!6.81e-08!86;UBERON:0002950!7.53e-08!4;UBERON:0001891!7.53e-08!4;UBERON:0009616!7.53e-08!4;UBERON:0002021!9.87e-08!10;UBERON:0000411!9.87e-08!10;UBERON:0001950!9.87e-08!10;UBERON:0002256!1.44e-07!2;UBERON:0002780!1.45e-07!39;UBERON:0001890!1.45e-07!39;UBERON:0006240!1.45e-07!39;UBERON:0001896!5.13e-07!2;UBERON:0005290!5.13e-07!2;UBERON:0010096!5.13e-07!2;UBERON:0000153!6.64e-07!94;UBERON:0004111!6.71e-07!122;UBERON:0000025!8.34e-07!114;UBERON:0003056!8.45e-07!49 | |ontology_enrichment_uberon=UBERON:0001049!5.92e-20!52;UBERON:0005068!5.92e-20!52;UBERON:0006241!5.92e-20!52;UBERON:0007135!5.92e-20!52;UBERON:0002240!1.38e-18!6;UBERON:0005174!1.38e-18!6;UBERON:0001137!1.38e-18!6;UBERON:0001017!3.50e-18!73;UBERON:0005743!3.50e-18!73;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001948!1.33e-15!5;UBERON:0002315!1.33e-15!5;UBERON:0003076!1.38e-15!12;UBERON:0003057!1.38e-15!12;UBERON:0002346!4.37e-15!71;UBERON:0003075!4.37e-15!71;UBERON:0007284!4.37e-15!71;UBERON:0002616!4.36e-13!49;UBERON:0002298!4.70e-13!6;UBERON:0002020!4.92e-13!34;UBERON:0004121!5.85e-13!102;UBERON:0000924!5.85e-13!102;UBERON:0006601!5.85e-13!102;UBERON:0000955!9.32e-13!50;UBERON:0006238!9.32e-13!50;UBERON:0000033!9.43e-11!63;UBERON:0002257!1.13e-09!3;UBERON:0003080!7.43e-09!40;UBERON:0007811!6.81e-08!86;UBERON:0002950!7.53e-08!4;UBERON:0001891!7.53e-08!4;UBERON:0009616!7.53e-08!4;UBERON:0002021!9.87e-08!10;UBERON:0000411!9.87e-08!10;UBERON:0001950!9.87e-08!10;UBERON:0002256!1.44e-07!2;UBERON:0002780!1.45e-07!39;UBERON:0001890!1.45e-07!39;UBERON:0006240!1.45e-07!39;UBERON:0001896!5.13e-07!2;UBERON:0005290!5.13e-07!2;UBERON:0010096!5.13e-07!2;UBERON:0000153!6.64e-07!94;UBERON:0004111!6.71e-07!122;UBERON:0000025!8.34e-07!114;UBERON:0003056!8.45e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.68e-22,6;UBERON:0005174,3.68e-22,6;UBERON:0001137,3.68e-22,6;UBERON:0004684,1.59e-20,3;UBERON:0002275,1.59e-20,3;UBERON:0001948,1.62e-12,5;UBERON:0002315,1.62e-12,5;UBERON:0003076,1.70e-11,12;UBERON:0003057,1.70e-11,12;UBERON:0002256,1.53e-08,2;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.45e-07,54;UBERON:0000489,7.22e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,0,3.06449611404451,2.15049146558741,0,0,0,3.07101298901519,0,0.45839474333043,0.294628585473668,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,0,3.06449611404451,2.15049146558741,0,0,0,3.07101298901519,0,0.45839474333043,0.294628585473668,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:4841397..4841408,- | |short_description=p@chr11:4841397..4841408,- | ||
}} | }} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr11:4841397..4841408, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4841397..4841408, - |
Coexpression cluster: | MCL_coexpression_mm9:602 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.59e-20 | 3 |
CNS neuron (sensu Vertebrata) | 2.52e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-16 | 23 |
neuron | 1.59e-11 | 33 |
neuronal stem cell | 1.59e-11 | 33 |
neuroblast | 1.59e-11 | 33 |
electrically signaling cell | 1.59e-11 | 33 |
electrically responsive cell | 8.12e-10 | 39 |
electrically active cell | 8.12e-10 | 39 |
neural cell | 6.12e-09 | 43 |
ectodermal cell | 9.58e-09 | 44 |
neurectodermal cell | 9.58e-09 | 44 |
neuron of the dorsal spinal cord | 1.53e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 3.68e-22 | 6 |
dorsal region element | 3.68e-22 | 6 |
dorsum | 3.68e-22 | 6 |
raphe nuclei | 1.59e-20 | 3 |
reticular formation | 1.59e-20 | 3 |
regional part of spinal cord | 1.62e-12 | 5 |
gray matter of spinal cord | 1.62e-12 | 5 |
posterior neural tube | 1.70e-11 | 12 |
chordal neural plate | 1.70e-11 | 12 |
dorsal horn of spinal cord | 1.53e-08 | 2 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.45e-07 | 54 |
cavitated compound organ | 7.22e-07 | 21 |