FFCP PHASE1:Mm9::chr5:136514551..136514577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100647 | |EntrezGene=100647 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q80YF6 | |UniProt=Q80YF6 | ||
|association_with_transcript=185bp_to_ENSMUST00000062606,NM_175309,uc008zzq.1_5end | |association_with_transcript=185bp_to_ENSMUST00000062606,NM_175309,uc008zzq.1_5end | ||
|cluster_id=chr5:136514551..136514577,+ | |||
|description=CAGE_peak_1_at_Upk3b_5end | |description=CAGE_peak_1_at_Upk3b_5end | ||
|id=chr5:136514551..136514577,+ | |id=chr5:136514551..136514577,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.45e-17!79;UBERON:0000464!7.24e-17!57;UBERON:0000926!3.49e-15!193;UBERON:0004120!3.49e-15!193;UBERON:0006603!3.49e-15!193;UBERON:0003886!9.41e-14!38;UBERON:0002323!1.00e-13!37;UBERON:0004458!1.00e-13!37;UBERON:0002553!6.89e-13!39;UBERON:0005177!4.19e-12!85;UBERON:0004872!1.11e-11!33;UBERON:0004921!3.52e-11!126;UBERON:0004185!3.52e-11!126;UBERON:0001048!4.87e-11!147;UBERON:0004119!1.06e-10!130;UBERON:0000925!1.06e-10!130;UBERON:0006595!1.06e-10!130;UBERON:0001007!1.15e-10!128;UBERON:0001555!1.15e-10!128;UBERON:0007026!1.15e-10!128;UBERON:0002100!1.22e-10!98;UBERON:0003914!1.62e-10!47;UBERON:0004535!2.24e-10!23;UBERON:0001009!2.24e-10!23;UBERON:0005409!2.26e-10!59;UBERON:0003104!1.83e-09!131;UBERON:0009142!1.83e-09!131;UBERON:0000077!2.63e-09!97;UBERON:0007100!3.25e-09!18;UBERON:0000948!3.25e-09!18;UBERON:0005498!3.25e-09!18;UBERON:0004140!3.25e-09!18;UBERON:0009881!3.25e-09!18;UBERON:0004141!3.25e-09!18;UBERON:0003084!3.25e-09!18;UBERON:0007005!3.25e-09!18;UBERON:0004139!3.25e-09!18;UBERON:0004291!3.25e-09!18;UBERON:0002075!4.09e-09!19;UBERON:0001041!6.94e-09!92;UBERON:0009569!1.25e-08!66;UBERON:0001045!6.21e-08!13;UBERON:0002048!7.87e-08!14;UBERON:0000117!7.87e-08!14;UBERON:0000171!7.87e-08!14;UBERON:0000170!7.87e-08!14;UBERON:0005597!7.87e-08!14;UBERON:0000118!7.87e-08!14;UBERON:0001264!8.84e-08!12;UBERON:0003922!8.84e-08!12;UBERON:0002114!8.84e-08!12;UBERON:0003923!8.84e-08!12;UBERON:0003924!8.84e-08!12;UBERON:0003921!8.84e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.31e-15,79;UBERON:0002100,1.50e-14,90;UBERON:0003886,8.65e-14,38;UBERON:0002323,9.32e-14,37;UBERON:0004458,9.32e-14,37;UBERON:0002553,5.62e-13,39;UBERON:0004872,4.00e-12,33;UBERON:0003914,4.05e-11,47;UBERON:0004535,8.88e-11,23;UBERON:0001009,8.88e-11,23;UBERON:0007100,1.42e-09,18;UBERON:0000948,1.42e-09,18;UBERON:0005498,1.42e-09,18;UBERON:0004140,1.42e-09,18;UBERON:0009881,1.42e-09,18;UBERON:0004141,1.42e-09,18;UBERON:0003084,1.42e-09,18;UBERON:0007005,1.42e-09,18;UBERON:0004139,1.42e-09,18;UBERON:0004291,1.42e-09,18;UBERON:0002075,2.15e-09,19;UBERON:0009569,3.49e-09,66;UBERON:0002048,4.60e-08,14;UBERON:0000117,4.60e-08,14;UBERON:0000171,4.60e-08,14;UBERON:0000170,4.60e-08,14;UBERON:0005597,4.60e-08,14;UBERON:0000118,4.60e-08,14;UBERON:0001264,5.19e-08,12;UBERON:0004921,7.46e-07,114;UBERON:0001048,8.60e-07,134 | |||
|phase1_expression=0,17.0997949743287,8.18998630901165,0.30246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8356060870121,0,0,0,0.22940928106717,6.31655160526522,3.87685796543167,2.58565479223067,1.14014051673824,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,34.9993153972105,40.3480186253668,2.56965453026354,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,0,19.1977404758967,170.687462543833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,21.1601076752225,10.3250865237766,0,0,0,0,7.44355426698285,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,6.82833839698194,16.4811060427829,34.7090645275841,35.9760175719451,21.1011696773672,41.3912249117681,15.7083239162094,120.136754318906,174.386824445413,0,0,0.220841518460394,0,18.6391761218122,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,195.633417956458,10.5745925018579,9.60346482047964,0.631325567659422,0.390361328888111,2.06911893990126,3.24111833649629,4.82255417074288,13.0630078370549,3.20284300712124,2.52994656311268,1.81092359517311,0,4.34943984385984,0,0.657587197282725,0.834141747676794,3.48252166522167,0,68.0697192519247,0,0,0,141.466902641748,127.113124509754,92.0117134065786,78.3625074787046,44.4687163749133,65.5635229771358,63.7143008616118,65.1904365401075,48.4576170823753,61.8745035674687,49.7427416159659,37.4537900101853,54.2401953347983,106.042705685577,72.6056725493611,0,0,0,12.6936271998501,75.0774641884024,68.5098181988294,45.7479487693431,34.4878827105916,37.1371333220933,46.0346015192393,14.7104009078799,41.6688355451748,28.903549012031,25.8643413653496,18.9115164505547,14.3811105384675,9.29393614461185,12.3467589417708,4.1726938209678,5.25543158004753,4.50830942692322,3.86937522906097,3.29719228184964,3.22624771495465,4.3000845244495,6.4948465111025,5.33795674660674,3.45512058981041,6.52195779591728,18.1861165230543,18.0834275504147,9.219346607779,9.94014594803664,12.7823894668781,16.8053062175737,20.7141218964584,12.6465476884528,17.8464918572253,17.2521847832825,19.3513292787622,21.8426371180192,17.4279425783507,12.3784215330119,8.20153986317724,92.7461014636356,62.53216588426,46.6079832624194,42.0967812722467,34.0300860018328,45.0591832518484,75.4598341608664,43.7099371201469,62.5811522101578,45.1787966883501,41.2987850822892,56.2051169474981,64.7568681997108,68.2743556504735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1184020928847,251.428632378164,193.998368590109,72.5868541079156,90.2666940711747,52.440617409476,42.9299450889946,50.9233715340925,99.8120397937012,79.9331384654211,69.2587825690833,76.3420831902762,87.6983550826414,48.9856974800515,47.4383738587494,49.5050607591297,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,6.33613611772018,5.08396970073168,8.82113592219848,0.49465875882444,0.161464426695906,0.120625849856312,0.119372344003136,0.656563598980245,14.2825609948627,0,5.46786818553129,143.43887323444,81.1152029879337,14.1276342753518,7.38148829693536,8.46479240864134,0,0,0,10.5013767981662,33.5316153196003,47.7800747748094,37.6938639468086,42.0267474989082,49.5683019703823,48.6860290449203,43.6410246229774,28.7931536182433,5.70305882483889,0,0.56369293868419,53.2278903916565,49.141171665758,39.6680424221857,40.2978649250521,32.777488345211,28.7525234682097,22.5253585780034,8.17902886520545,3.38217769156408,2.88030006257865,11.3764003426144,15.6098415773426,5.6491026440655,3.50786222040047,3.93858730468459,7.15252877212554,1.9231271923195,1.18151621739662,1.51449674922221,1.143102099825,1.10908803650525,1.46186821109629,0.481059208201647,3.3894301632655,0,0.221985953374065,0,0,108.379362252059,58.1815673898664,29.1211082584951,0.643105137237198,12.5393026008841,0,0,0,0,0,0,0,0,0,0,3.32119512269365,11.9707462020309,8.53668028770671,11.1829089851415,6.28839487883947,6.61836630420051,9.55660929546946,11.9500333198559,8.98573786857083,9.09709962349671,8.36481689637791,9.61994341068989,9.92599979180754,8.19521950782327,9.36198143976496,9.52587382566147,7.76424983830532,7.5234595980845,10.3021475200827,8.39033844766065,11.3146853287187,11.8908790126756,9.29901140794552,8.72078499793971,8.65806299821042,9.47683608386777,10.2439664808753,12.6273461490165,7.60503037536826,10.1005608898393,8.54172130494054,9.45643030805409,7.36615877705441,7.12709469455443,10.6098636039628,1.74867404556562,18.0127338502964,13.9666185131394,4.20834330551455,5.95596831622692,5.79669589051054 | |phase1_expression=0,17.0997949743287,8.18998630901165,0.30246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8356060870121,0,0,0,0.22940928106717,6.31655160526522,3.87685796543167,2.58565479223067,1.14014051673824,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,34.9993153972105,40.3480186253668,2.56965453026354,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,0,19.1977404758967,170.687462543833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,21.1601076752225,10.3250865237766,0,0,0,0,7.44355426698285,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,6.82833839698194,16.4811060427829,34.7090645275841,35.9760175719451,21.1011696773672,41.3912249117681,15.7083239162094,120.136754318906,174.386824445413,0,0,0.220841518460394,0,18.6391761218122,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,195.633417956458,10.5745925018579,9.60346482047964,0.631325567659422,0.390361328888111,2.06911893990126,3.24111833649629,4.82255417074288,13.0630078370549,3.20284300712124,2.52994656311268,1.81092359517311,0,4.34943984385984,0,0.657587197282725,0.834141747676794,3.48252166522167,0,68.0697192519247,0,0,0,141.466902641748,127.113124509754,92.0117134065786,78.3625074787046,44.4687163749133,65.5635229771358,63.7143008616118,65.1904365401075,48.4576170823753,61.8745035674687,49.7427416159659,37.4537900101853,54.2401953347983,106.042705685577,72.6056725493611,0,0,0,12.6936271998501,75.0774641884024,68.5098181988294,45.7479487693431,34.4878827105916,37.1371333220933,46.0346015192393,14.7104009078799,41.6688355451748,28.903549012031,25.8643413653496,18.9115164505547,14.3811105384675,9.29393614461185,12.3467589417708,4.1726938209678,5.25543158004753,4.50830942692322,3.86937522906097,3.29719228184964,3.22624771495465,4.3000845244495,6.4948465111025,5.33795674660674,3.45512058981041,6.52195779591728,18.1861165230543,18.0834275504147,9.219346607779,9.94014594803664,12.7823894668781,16.8053062175737,20.7141218964584,12.6465476884528,17.8464918572253,17.2521847832825,19.3513292787622,21.8426371180192,17.4279425783507,12.3784215330119,8.20153986317724,92.7461014636356,62.53216588426,46.6079832624194,42.0967812722467,34.0300860018328,45.0591832518484,75.4598341608664,43.7099371201469,62.5811522101578,45.1787966883501,41.2987850822892,56.2051169474981,64.7568681997108,68.2743556504735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1184020928847,251.428632378164,193.998368590109,72.5868541079156,90.2666940711747,52.440617409476,42.9299450889946,50.9233715340925,99.8120397937012,79.9331384654211,69.2587825690833,76.3420831902762,87.6983550826414,48.9856974800515,47.4383738587494,49.5050607591297,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,6.33613611772018,5.08396970073168,8.82113592219848,0.49465875882444,0.161464426695906,0.120625849856312,0.119372344003136,0.656563598980245,14.2825609948627,0,5.46786818553129,143.43887323444,81.1152029879337,14.1276342753518,7.38148829693536,8.46479240864134,0,0,0,10.5013767981662,33.5316153196003,47.7800747748094,37.6938639468086,42.0267474989082,49.5683019703823,48.6860290449203,43.6410246229774,28.7931536182433,5.70305882483889,0,0.56369293868419,53.2278903916565,49.141171665758,39.6680424221857,40.2978649250521,32.777488345211,28.7525234682097,22.5253585780034,8.17902886520545,3.38217769156408,2.88030006257865,11.3764003426144,15.6098415773426,5.6491026440655,3.50786222040047,3.93858730468459,7.15252877212554,1.9231271923195,1.18151621739662,1.51449674922221,1.143102099825,1.10908803650525,1.46186821109629,0.481059208201647,3.3894301632655,0,0.221985953374065,0,0,108.379362252059,58.1815673898664,29.1211082584951,0.643105137237198,12.5393026008841,0,0,0,0,0,0,0,0,0,0,3.32119512269365,11.9707462020309,8.53668028770671,11.1829089851415,6.28839487883947,6.61836630420051,9.55660929546946,11.9500333198559,8.98573786857083,9.09709962349671,8.36481689637791,9.61994341068989,9.92599979180754,8.19521950782327,9.36198143976496,9.52587382566147,7.76424983830532,7.5234595980845,10.3021475200827,8.39033844766065,11.3146853287187,11.8908790126756,9.29901140794552,8.72078499793971,8.65806299821042,9.47683608386777,10.2439664808753,12.6273461490165,7.60503037536826,10.1005608898393,8.54172130494054,9.45643030805409,7.36615877705441,7.12709469455443,10.6098636039628,1.74867404556562,18.0127338502964,13.9666185131394,4.20834330551455,5.95596831622692,5.79669589051054 | ||
|short_description=p1@Upk3b | |short_description=p1@Upk3b | ||
}} | }} |
Latest revision as of 13:43, 25 September 2015
Short description: | p1@Upk3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Upk3b_5end |
Coexpression cluster: | NA |
Association with transcript: | 185bp_to_ENSMUST00000062606, NM_175309, uc008zzq.1_5end |
EntrezGene: | Upk3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.31e-15 | 79 |
trunk | 1.50e-14 | 90 |
body cavity precursor | 8.65e-14 | 38 |
body cavity | 9.32e-14 | 37 |
body cavity or lining | 9.32e-14 | 37 |
anatomical cavity | 5.62e-13 | 39 |
splanchnic layer of lateral plate mesoderm | 4.00e-12 | 33 |
epithelial tube | 4.05e-11 | 47 |
cardiovascular system | 8.88e-11 | 23 |
circulatory system | 8.88e-11 | 23 |
primary circulatory organ | 1.42e-09 | 18 |
heart | 1.42e-09 | 18 |
primitive heart tube | 1.42e-09 | 18 |
primary heart field | 1.42e-09 | 18 |
anterior lateral plate mesoderm | 1.42e-09 | 18 |
heart tube | 1.42e-09 | 18 |
heart primordium | 1.42e-09 | 18 |
cardiac mesoderm | 1.42e-09 | 18 |
cardiogenic plate | 1.42e-09 | 18 |
heart rudiment | 1.42e-09 | 18 |
viscus | 2.15e-09 | 19 |
subdivision of trunk | 3.49e-09 | 66 |
lung | 4.60e-08 | 14 |
respiratory tube | 4.60e-08 | 14 |
respiration organ | 4.60e-08 | 14 |
pair of lungs | 4.60e-08 | 14 |
lung primordium | 4.60e-08 | 14 |
lung bud | 4.60e-08 | 14 |
pancreas | 5.19e-08 | 12 |
subdivision of digestive tract | 7.46e-07 | 114 |
primordium | 8.60e-07 | 134 |