FFCP PHASE1:Mm9::chr2:50152414..50152430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1028 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENSMUST00000123699_5end | |association_with_transcript=30bp_to_ENSMUST00000123699_5end | ||
|cluster_id=chr2:50152414..50152430,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000123699_5end | |description=CAGE_peak_2_at_ENSMUST00000123699_5end | ||
|id=chr2:50152414..50152430,+ | |id=chr2:50152414..50152430,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.96e-19,7;CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,1.63e-14,6;CL:0000187,1.63e-14,6;CL:0000056,1.63e-14,6;CL:0000355,9.63e-10,9;CL:0002293,2.05e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.16e-17,5;UBERON:0007500,1.16e-17,5;UBERON:0001981,1.16e-17,5;UBERON:0002049,1.16e-17,5;UBERON:0007798,1.16e-17,5;UBERON:0004537,1.16e-17,5;UBERON:0006965,1.16e-17,5;UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0001134,9.63e-10,9;UBERON:0002036,9.63e-10,9;UBERON:0002385,9.63e-10,9;UBERON:0000486,9.63e-10,9;UBERON:0007503,9.63e-10,9;UBERON:0001015,9.63e-10,9;UBERON:0002329,9.63e-10,9;UBERON:0003082,9.63e-10,9;UBERON:0003059,9.63e-10,9;UBERON:0007282,9.63e-10,9;UBERON:0004290,9.63e-10,9;UBERON:0009618,9.63e-10,9;UBERON:0000383,8.75e-09,10;UBERON:0007524,5.34e-08,11;UBERON:0003077,5.34e-08,11;UBERON:0007285,5.34e-08,11 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,6.9950082541465,2.56965453026354,0,0,0,0.388859798148567,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,0.860423876981386,0.679971333707751,0.539703191637817,0,1.34408066129201,0.561777680527007,1.87473354835864,0.779358013808606,2.82671659608272,0.14084341977668,6.41632387071589,0,7.11066703153331,0,0,0,0.68510327831436,0,0.890652834388949,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.376999773989026,0,0.722996784599558,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0.486723789203273,0.305518091550949,0.248813941220186,0.505445516867349,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,1.03481348295606,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.853153002140936,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.569128834118316,0.295220295959204,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0,0,0,0,0,0,0,0,1.48856379067401,0.624075346229121,1.01031551178845,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,1.10732344824387,0,0,0,0,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0.819674726883377,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0.619160603889667,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,2.25477175473676,0.747582730219894,0.496375471371293,0.194451188344048,0.387479470433193,0.844780627453891,0.938857909166032,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0,0.320919209591815,0.505394423527595,0,0,0,0.448176066834085,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0 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|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,6.9950082541465,2.56965453026354,0,0,0,0.388859798148567,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,0.860423876981386,0.679971333707751,0.539703191637817,0,1.34408066129201,0.561777680527007,1.87473354835864,0.779358013808606,2.82671659608272,0.14084341977668,6.41632387071589,0,7.11066703153331,0,0,0,0.68510327831436,0,0.890652834388949,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.376999773989026,0,0.722996784599558,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0.486723789203273,0.305518091550949,0.248813941220186,0.505445516867349,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,1.03481348295606,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.853153002140936,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.569128834118316,0.295220295959204,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0,0,0,0,0,0,0,0,1.48856379067401,0.624075346229121,1.01031551178845,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,1.10732344824387,0,0,0,0,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0.819674726883377,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0.619160603889667,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,2.25477175473676,0.747582730219894,0.496375471371293,0.194451188344048,0.387479470433193,0.844780627453891,0.938857909166032,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0,0.320919209591815,0.505394423527595,0,0,0,0.448176066834085,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p2@ENSMUST00000123699 | |short_description=p2@ENSMUST00000123699 | ||
}} | }} |
Latest revision as of 05:35, 5 August 2015
Short description: | p2@ENSMUST00000123699 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000123699_5end |
Coexpression cluster: | MCL_coexpression_mm9:1028 |
Association with transcript: | 30bp_to_ENSMUST00000123699_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.96e-19 | 7 |
smooth muscle cell | 3.99e-17 | 3 |
vascular associated smooth muscle cell | 3.99e-17 | 3 |
aortic smooth muscle cell | 3.99e-17 | 3 |
smooth muscle myoblast | 3.99e-17 | 3 |
muscle precursor cell | 1.63e-14 | 6 |
muscle cell | 1.63e-14 | 6 |
myoblast | 1.63e-14 | 6 |
multi-potent skeletal muscle stem cell | 9.63e-10 | 9 |
epithelial cell of thymus | 2.05e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.16e-17 | 5 |
epithelial tube open at both ends | 1.16e-17 | 5 |
blood vessel | 1.16e-17 | 5 |
vasculature | 1.16e-17 | 5 |
vascular system | 1.16e-17 | 5 |
blood vasculature | 1.16e-17 | 5 |
vascular cord | 1.16e-17 | 5 |
smooth muscle tissue | 3.99e-17 | 3 |
blood vessel smooth muscle | 3.99e-17 | 3 |
arterial system smooth muscle | 3.99e-17 | 3 |
artery smooth muscle tissue | 3.99e-17 | 3 |
aorta smooth muscle tissue | 3.99e-17 | 3 |
aorta | 5.50e-13 | 4 |
artery | 5.50e-13 | 4 |
systemic artery | 5.50e-13 | 4 |
arterial blood vessel | 5.50e-13 | 4 |
systemic arterial system | 5.50e-13 | 4 |
aortic system | 5.50e-13 | 4 |
arterial system | 5.50e-13 | 4 |
skeletal muscle tissue | 9.63e-10 | 9 |
striated muscle tissue | 9.63e-10 | 9 |
muscle tissue | 9.63e-10 | 9 |
multilaminar epithelium | 9.63e-10 | 9 |
epithelial vesicle | 9.63e-10 | 9 |
musculature | 9.63e-10 | 9 |
somite | 9.63e-10 | 9 |
myotome | 9.63e-10 | 9 |
presomitic mesoderm | 9.63e-10 | 9 |
presumptive segmental plate | 9.63e-10 | 9 |
dermomyotome | 9.63e-10 | 9 |
trunk paraxial mesoderm | 9.63e-10 | 9 |
musculature of body | 8.75e-09 | 10 |
dense mesenchyme tissue | 5.34e-08 | 11 |
paraxial mesoderm | 5.34e-08 | 11 |
presumptive paraxial mesoderm | 5.34e-08 | 11 |