FFCP PHASE1:Mm9::chr6:146526110..146526114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71177 | |EntrezGene=71177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2014 | |||
|TSSclassifier=NA | |||
|UniProt=Q8QZV7,B2KG23 | |UniProt=Q8QZV7,B2KG23 | ||
|association_with_transcript=242bp_to_ENSMUST00000032427,NM_138757,uc009esb.1_5end | |association_with_transcript=242bp_to_ENSMUST00000032427,NM_138757,uc009esb.1_5end | ||
|cluster_id=chr6:146526110..146526114,- | |||
|description=CAGE_peak_6_at_4933424B01Rik_5end | |description=CAGE_peak_6_at_4933424B01Rik_5end | ||
|id=chr6:146526110..146526114,- | |id=chr6:146526110..146526114,- | ||
|ontology_enrichment_celltype=CL:0000548!2.30e-31!115;CL:0000004!2.30e-31!115;CL:0000255!2.30e-31!115;CL:0000055!3.59e-31!50;CL:0002321!9.78e-31!70;CL:0000220!9.78e-31!70;CL:0000144!3.47e-30!121;CL:0000012!3.47e-30!121;CL:0002371!7.81e-30!118;CL:0000221!1.80e-28!44;CL:0000133!1.80e-28!44;CL:0002319!8.03e-28!43;CL:0000393!9.51e-27!39;CL:0000211!9.51e-27!39;CL:0000540!1.42e-22!33;CL:0000047!1.42e-22!33;CL:0000031!1.42e-22!33;CL:0000404!1.42e-22!33;CL:0000034!2.66e-20!97;CL:0000723!1.02e-18!91;CL:0000048!1.02e-18!91;CL:0000117!5.34e-16!23;CL:0000337!5.34e-16!23;CL:0000107!1.75e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.56e-36,70;CL:0000221,4.48e-35,44;CL:0000133,4.48e-35,44;CL:0002319,3.96e-34,43;CL:0000393,6.31e-34,39;CL:0000211,6.31e-34,39;CL:0000540,7.84e-28,33;CL:0000047,7.84e-28,33;CL:0000031,7.84e-28,33;CL:0000404,7.84e-28,33;CL:0000723,7.40e-21,91;CL:0000048,7.40e-21,91;CL:0000034,8.97e-20,97;CL:0000117,1.36e-19,23;CL:0000337,1.36e-19,23;CL:0000107,2.50e-10,9;CL:0002609,6.73e-09,6;CL:0000333,5.38e-07,10;CL:0000095,5.38e-07,10;CL:0000243,5.38e-07,10;CL:0000123,5.38e-07,10;CL:0000125,5.38e-07,10;CL:0000030,5.38e-07,10;CL:0000339,5.38e-07,10;CL:0000680,5.58e-07,6;CL:0000187,5.58e-07,6;CL:0000056,5.58e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.22e-11!75;UBERON:0001016!3.22e-11!75;UBERON:0001017!4.05e-10!73;UBERON:0005743!4.05e-10!73;UBERON:0000010!6.02e-09!11;UBERON:0002410!1.75e-07!9;UBERON:0002020!3.68e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.23e-15,75;UBERON:0001017,2.74e-13,73;UBERON:0000010,1.73e-12,11;UBERON:0004121,2.43e-10,95;UBERON:0000924,2.43e-10,95;UBERON:0006601,2.43e-10,95;UBERON:0002410,2.50e-10,9;UBERON:0002020,2.05e-09,34 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,4.50806156951712,1.84667199103079,2.56973904655078,4.26106967357202,0.281577444303333,8.42632294759177,0,4.06838010876216,0,3.3219752919219,0,0,0.699561878128147,0,0,0,3.40173160604279,0,0,0.639969691173627,1.83527424853736,1.14846392823004,2.58457197695445,1.29282739611533,1.90023419456374,1.00812051903972,2.43903561720835,5.08024538767705,6.76571266343027,0,0,0,0,0,0,0,0,0.683045484958446,0,1.38486499773135,1.31790010585369,1.65192076945513,1.56478268869608,2.39827672018491,2.63623419281366,1.1665793944457,2.65974201088189,0,0,0,0,2.57259436035947,2.29226751951005,3.6097046459421,4.65327859977075,5.28990979272033,3.1691570175309,0,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,1.8664130215526,4.86021377994086,2.94454945891935,1.71390590642282,1.32521124570968,3.55223317723367,4.60058260887535,4.5960939330501,0,0.766124028511126,0.921639199537461,3.29715719325485,3.20206752608434,1.04182674111352,1.11673199600552,3.93933827022176,1.06958773443767,4.41942878210502,1.85083185038834,4.65998614563251,3.93776205332557,1.88928900266964,0,0,4.75979933595425,3.2382191498269,0,0,2.10666630197628,0.681721290312231,2.85764605063156,1.7666978725517,1.69012103732017,1.28326477414318,0,0,0,0.253359865475099,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,1.58670339998127,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,2.45902418065013,0,1.57754109708128,2.34263246577983,2.58508077279359,2.15071918157297,2.89638276307112,1.41538265394416,1.21443210502468,2.92255857911312,5.92931666919785,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0.221985953374065,1.34570784914214,0.503653849092235,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,4.50806156951712,1.84667199103079,2.56973904655078,4.26106967357202,0.281577444303333,8.42632294759177,0,4.06838010876216,0,3.3219752919219,0,0,0.699561878128147,0,0,0,3.40173160604279,0,0,0.639969691173627,1.83527424853736,1.14846392823004,2.58457197695445,1.29282739611533,1.90023419456374,1.00812051903972,2.43903561720835,5.08024538767705,6.76571266343027,0,0,0,0,0,0,0,0,0.683045484958446,0,1.38486499773135,1.31790010585369,1.65192076945513,1.56478268869608,2.39827672018491,2.63623419281366,1.1665793944457,2.65974201088189,0,0,0,0,2.57259436035947,2.29226751951005,3.6097046459421,4.65327859977075,5.28990979272033,3.1691570175309,0,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,1.8664130215526,4.86021377994086,2.94454945891935,1.71390590642282,1.32521124570968,3.55223317723367,4.60058260887535,4.5960939330501,0,0.766124028511126,0.921639199537461,3.29715719325485,3.20206752608434,1.04182674111352,1.11673199600552,3.93933827022176,1.06958773443767,4.41942878210502,1.85083185038834,4.65998614563251,3.93776205332557,1.88928900266964,0,0,4.75979933595425,3.2382191498269,0,0,2.10666630197628,0.681721290312231,2.85764605063156,1.7666978725517,1.69012103732017,1.28326477414318,0,0,0,0.253359865475099,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,1.58670339998127,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,2.45902418065013,0,1.57754109708128,2.34263246577983,2.58508077279359,2.15071918157297,2.89638276307112,1.41538265394416,1.21443210502468,2.92255857911312,5.92931666919785,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0.221985953374065,1.34570784914214,0.503653849092235,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p6@4933424B01Rik | |short_description=p6@4933424B01Rik | ||
}} | }} |
Latest revision as of 22:31, 26 September 2015
Short description: | p6@4933424B01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_4933424B01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2014 |
Association with transcript: | 242bp_to_ENSMUST00000032427, NM_138757, uc009esb.1_5end |
EntrezGene: | 4933424B01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.56e-36 | 70 |
ectodermal cell | 4.48e-35 | 44 |
neurectodermal cell | 4.48e-35 | 44 |
neural cell | 3.96e-34 | 43 |
electrically responsive cell | 6.31e-34 | 39 |
electrically active cell | 6.31e-34 | 39 |
neuron | 7.84e-28 | 33 |
neuronal stem cell | 7.84e-28 | 33 |
neuroblast | 7.84e-28 | 33 |
electrically signaling cell | 7.84e-28 | 33 |
somatic stem cell | 7.40e-21 | 91 |
multi fate stem cell | 7.40e-21 | 91 |
stem cell | 8.97e-20 | 97 |
CNS neuron (sensu Vertebrata) | 1.36e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-19 | 23 |
autonomic neuron | 2.50e-10 | 9 |
neuron of cerebral cortex | 6.73e-09 | 6 |
migratory neural crest cell | 5.38e-07 | 10 |
neuron associated cell | 5.38e-07 | 10 |
glial cell (sensu Vertebrata) | 5.38e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.38e-07 | 10 |
glial cell | 5.38e-07 | 10 |
glioblast | 5.38e-07 | 10 |
glioblast (sensu Vertebrata) | 5.38e-07 | 10 |
muscle precursor cell | 5.58e-07 | 6 |
muscle cell | 5.58e-07 | 6 |
myoblast | 5.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.23e-15 | 75 |
central nervous system | 2.74e-13 | 73 |
peripheral nervous system | 1.73e-12 | 11 |
ectoderm-derived structure | 2.43e-10 | 95 |
ectoderm | 2.43e-10 | 95 |
presumptive ectoderm | 2.43e-10 | 95 |
autonomic nervous system | 2.50e-10 | 9 |
gray matter | 2.05e-09 | 34 |