FFCP PHASE1:Mm9::chr6:83087832..83087840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:83087832..83087840,+ | |||
|description=CAGE_peak_at_chr6:83087832..83087840,+ | |description=CAGE_peak_at_chr6:83087832..83087840,+ | ||
|id=chr6:83087832..83087840,+ | |id=chr6:83087832..83087840,+ | ||
|ontology_enrichment_celltype=CL:0000107!3.79e-08!9;CL:0000221!7.56e-07!44;CL:0000133!7.56e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.86e-26,9;CL:0000221,9.27e-15,44;CL:0000133,9.27e-15,44;CL:0002319,1.15e-12,43;CL:0000217,1.08e-11,2;CL:0000328,1.08e-11,2;CL:0002573,1.08e-11,2;CL:0002376,1.08e-11,2;CL:0000218,1.08e-11,2;CL:0000692,1.08e-11,2;CL:0002377,1.08e-11,2;CL:0002375,1.08e-11,2;CL:0002321,3.13e-10,70;CL:0000393,4.00e-09,39;CL:0000211,4.00e-09,39;CL:0000540,1.07e-08,33;CL:0000047,1.07e-08,33;CL:0000031,1.07e-08,33;CL:0000404,1.07e-08,33;CL:0000215,4.50e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.54e-10!11;UBERON:0002410!3.79e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.62e-36,11;UBERON:0002410,3.86e-26,9;UBERON:0000011,6.53e-16,3;UBERON:0001016,4.22e-11,75;UBERON:0001896,9.72e-11,2;UBERON:0002298,9.72e-11,2;UBERON:0005290,9.72e-11,2;UBERON:0010096,9.72e-11,2;UBERON:0004121,1.01e-09,95;UBERON:0000924,1.01e-09,95;UBERON:0006601,1.01e-09,95;UBERON:0004733,4.32e-08,6;UBERON:0004732,4.32e-08,6;UBERON:0002028,4.32e-08,6;UBERON:0007277,4.32e-08,6;UBERON:0001017,4.86e-08,73;UBERON:0000013,1.78e-07,3;UBERON:0010313,3.46e-07,3;UBERON:0002342,3.46e-07,3;UBERON:0002005,3.46e-07,3;UBERON:0005428,3.46e-07,3;UBERON:0005062,3.46e-07,3;UBERON:0003076,7.24e-07,12;UBERON:0003057,7.24e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,0,0,0.388859798148567,0,0,0,0,0,1.28629718017973,0,0,0,0,0,0.677689064138264,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,2.20231761998777,0.383062014255563,0.307213066512487,0,0,0,0.837548997004143,0,0.916789486660861,0.883885756421003,0.284743361598206,0,3.48340489332647,3.09843396437821,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0,0.301445281105245,0,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.599162557619291,0.915001205637253,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0.407357455401265,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0.449724224769707,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0.814824882210129,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,1.52375192569864,0,0.504941854408746,0.631016438832513,1.17131623288992,1.07711698866399,1.91175038362042,1.33679204449436,1.69845918473299,0.404810701674894,1.46127928955656,1.18586333383957,0,0,0.712262414669021,0,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0.388076051348264,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0.180938774784468,0,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.258319646955462,0,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | |phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,0,0,0.388859798148567,0,0,0,0,0,1.28629718017973,0,0,0,0,0,0.677689064138264,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,2.20231761998777,0.383062014255563,0.307213066512487,0,0,0,0.837548997004143,0,0.916789486660861,0.883885756421003,0.284743361598206,0,3.48340489332647,3.09843396437821,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0,0.301445281105245,0,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.599162557619291,0.915001205637253,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0.407357455401265,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0.449724224769707,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0.814824882210129,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,1.52375192569864,0,0.504941854408746,0.631016438832513,1.17131623288992,1.07711698866399,1.91175038362042,1.33679204449436,1.69845918473299,0.404810701674894,1.46127928955656,1.18586333383957,0,0,0.712262414669021,0,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0.388076051348264,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0.220528398054962,0,0,0.180938774784468,0,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.258319646955462,0,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | ||
|short_description=p@chr6:83087832..83087840,+ | |short_description=p@chr6:83087832..83087840,+ | ||
}} | }} |
Latest revision as of 04:15, 6 August 2015
Short description: | p@chr6:83087832..83087840, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:83087832..83087840, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.86e-26 | 9 |
ectodermal cell | 9.27e-15 | 44 |
neurectodermal cell | 9.27e-15 | 44 |
neural cell | 1.15e-12 | 43 |
insulating cell | 1.08e-11 | 2 |
myelin accumulating cell | 1.08e-11 | 2 |
Schwann cell | 1.08e-11 | 2 |
non-myelinating Schwann cell | 1.08e-11 | 2 |
myelinating Schwann cell;;Schwann cell | 1.08e-11 | 2 |
terminal Schwann cell | 1.08e-11 | 2 |
immature Schwann cell | 1.08e-11 | 2 |
Schwann cell precursor | 1.08e-11 | 2 |
embryonic cell | 3.13e-10 | 70 |
electrically responsive cell | 4.00e-09 | 39 |
electrically active cell | 4.00e-09 | 39 |
neuron | 1.07e-08 | 33 |
neuronal stem cell | 1.07e-08 | 33 |
neuroblast | 1.07e-08 | 33 |
electrically signaling cell | 1.07e-08 | 33 |
barrier cell | 4.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.62e-36 | 11 |
autonomic nervous system | 3.86e-26 | 9 |
parasympathetic nervous system | 6.53e-16 | 3 |
nervous system | 4.22e-11 | 75 |
medulla oblongata | 9.72e-11 | 2 |
brainstem | 9.72e-11 | 2 |
myelencephalon | 9.72e-11 | 2 |
future myelencephalon | 9.72e-11 | 2 |
ectoderm-derived structure | 1.01e-09 | 95 |
ectoderm | 1.01e-09 | 95 |
presumptive ectoderm | 1.01e-09 | 95 |
segmental subdivision of hindbrain | 4.32e-08 | 6 |
segmental subdivision of nervous system | 4.32e-08 | 6 |
hindbrain | 4.32e-08 | 6 |
presumptive hindbrain | 4.32e-08 | 6 |
central nervous system | 4.86e-08 | 73 |
sympathetic nervous system | 1.78e-07 | 3 |
neural crest-derived structure | 3.46e-07 | 3 |
neural crest | 3.46e-07 | 3 |
enteric nervous system | 3.46e-07 | 3 |
vagal neural crest | 3.46e-07 | 3 |
neural fold | 3.46e-07 | 3 |
posterior neural tube | 7.24e-07 | 12 |
chordal neural plate | 7.24e-07 | 12 |