FFCP PHASE1:Mm9::chr15:81958346..81958431,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76457 | |EntrezGene=76457 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=669 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C7V8,E9Q204 | |UniProt=Q8C7V8,E9Q204 | ||
|association_with_transcript=0bp_to_ENSMUST00000089174,ENSMUST00000100394,NM_172428,uc007wye.1,uc007wyf.1,uc007wyg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000089174,ENSMUST00000100394,NM_172428,uc007wye.1,uc007wyf.1,uc007wyg.1_5end | ||
|cluster_id=chr15:81958346..81958431,+ | |||
|description=CAGE_peak_1_at_Ccdc134_5end | |description=CAGE_peak_1_at_Ccdc134_5end | ||
|id=chr15:81958346..81958431,+ | |id=chr15:81958346..81958431,+ | ||
|ontology_enrichment_celltype=CL:0002031!2.50e-08!25;CL:0000838!4.95e-07!12;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13 | |ontology_enrichment_celltype=CL:0002031!2.50e-08!25;CL:0000838!4.95e-07!12;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.50e-08,25;CL:0000838,4.95e-07,12;CL:0000542,5.84e-07,13;CL:0000051,5.84e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.21e-11!23;UBERON:0000974!7.21e-11!23;UBERON:0004807!7.21e-11!23;UBERON:0005058!7.21e-11!23;UBERON:0003351!7.21e-11!23;UBERON:0009113!7.21e-11!23;UBERON:0003295!7.21e-11!23;UBERON:0009722!7.21e-11!23;UBERON:0005562!7.21e-11!23;UBERON:0007690!7.21e-11!23;UBERON:0002193!1.37e-10!48;UBERON:0004177!1.43e-10!29;UBERON:0003408!3.48e-10!24;UBERON:0006562!5.32e-10!24;UBERON:0001557!5.32e-10!24;UBERON:0001042!5.32e-10!24;UBERON:0008814!5.32e-10!24;UBERON:0009145!5.32e-10!24;UBERON:0002390!1.37e-09!45;UBERON:0003061!1.37e-09!45;UBERON:0000072!3.83e-07!27 | |ontology_enrichment_uberon=UBERON:0002370!7.21e-11!23;UBERON:0000974!7.21e-11!23;UBERON:0004807!7.21e-11!23;UBERON:0005058!7.21e-11!23;UBERON:0003351!7.21e-11!23;UBERON:0009113!7.21e-11!23;UBERON:0003295!7.21e-11!23;UBERON:0009722!7.21e-11!23;UBERON:0005562!7.21e-11!23;UBERON:0007690!7.21e-11!23;UBERON:0002193!1.37e-10!48;UBERON:0004177!1.43e-10!29;UBERON:0003408!3.48e-10!24;UBERON:0006562!5.32e-10!24;UBERON:0001557!5.32e-10!24;UBERON:0001042!5.32e-10!24;UBERON:0008814!5.32e-10!24;UBERON:0009145!5.32e-10!24;UBERON:0002390!1.37e-09!45;UBERON:0003061!1.37e-09!45;UBERON:0000072!3.83e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.23e-11,43;UBERON:0002370,7.21e-11,23;UBERON:0000974,7.21e-11,23;UBERON:0004807,7.21e-11,23;UBERON:0005058,7.21e-11,23;UBERON:0003351,7.21e-11,23;UBERON:0009113,7.21e-11,23;UBERON:0003295,7.21e-11,23;UBERON:0009722,7.21e-11,23;UBERON:0005562,7.21e-11,23;UBERON:0007690,7.21e-11,23;UBERON:0002193,1.37e-10,48;UBERON:0002405,1.37e-10,48;UBERON:0004177,1.43e-10,29;UBERON:0005057,1.43e-10,29;UBERON:0003408,3.48e-10,24;UBERON:0006562,5.32e-10,24;UBERON:0001557,5.32e-10,24;UBERON:0001042,5.32e-10,24;UBERON:0008814,5.32e-10,24;UBERON:0009145,5.32e-10,24;UBERON:0000077,9.67e-10,35;UBERON:0002390,1.37e-09,45;UBERON:0003061,1.37e-09,45;UBERON:0007811,1.52e-09,36;UBERON:0000072,3.83e-07,27 | |||
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| ||
|short_description=p1@Ccdc134 | |short_description=p1@Ccdc134 | ||
}} | }} |
Latest revision as of 04:40, 27 September 2015
Short description: | p1@Ccdc134 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc134_5end |
Coexpression cluster: | MCL_coexpression_mm9:669 |
Association with transcript: | 0bp_to_ENSMUST00000089174, ENSMUST00000100394, NM_172428, uc007wye.1, uc007wyf.1, uc007wyg.1_5end |
EntrezGene: | Ccdc134 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.50e-08 | 25 |
lymphoid lineage restricted progenitor cell | 4.95e-07 | 12 |
lymphocyte | 5.84e-07 | 13 |
common lymphoid progenitor | 5.84e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 4.23e-11 | 43 |
thymus | 7.21e-11 | 23 |
neck | 7.21e-11 | 23 |
respiratory system epithelium | 7.21e-11 | 23 |
hemolymphoid system gland | 7.21e-11 | 23 |
pharyngeal epithelium | 7.21e-11 | 23 |
thymic region | 7.21e-11 | 23 |
pharyngeal gland | 7.21e-11 | 23 |
entire pharyngeal arch endoderm | 7.21e-11 | 23 |
thymus primordium | 7.21e-11 | 23 |
early pharyngeal endoderm | 7.21e-11 | 23 |
hemolymphoid system | 1.37e-10 | 48 |
immune system | 1.37e-10 | 48 |
hemopoietic organ | 1.43e-10 | 29 |
immune organ | 1.43e-10 | 29 |
gland of gut | 3.48e-10 | 24 |
pharynx | 5.32e-10 | 24 |
upper respiratory tract | 5.32e-10 | 24 |
chordate pharynx | 5.32e-10 | 24 |
pharyngeal arch system | 5.32e-10 | 24 |
pharyngeal region of foregut | 5.32e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 9.67e-10 | 35 |
hematopoietic system | 1.37e-09 | 45 |
blood island | 1.37e-09 | 45 |
craniocervical region | 1.52e-09 | 36 |
segment of respiratory tract | 3.83e-07 | 27 |