FFCP PHASE1:Hg19::chr6:30851840..30851902,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.57e-48!254;CL:0002076!9.84e-16!43;CL:0002321!2.60e-15!248;CL:0000220!7.18e-15!246;CL:0000223!1.40e-14!59;CL:0000221!2.18e-10!71;CL:0000076!7.87e-09!62;CL:0002077!1.01e-08!33;CL:0002251!7.29e-08!21;CL:0002159!7.69e-08!13;CL:0002368!5.48e-07!13;CL:1000449!5.84e-07!16;CL:1000497!7.45e-07!18;CL:0002518!7.45e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.57e-48!254;CL:0002076!9.84e-16!43;CL:0002321!2.60e-15!248;CL:0000220!7.18e-15!246;CL:0000223!1.40e-14!59;CL:0000221!2.18e-10!71;CL:0000076!7.87e-09!62;CL:0002077!1.01e-08!33;CL:0002251!7.29e-08!21;CL:0002159!7.69e-08!13;CL:0002368!5.48e-07!13;CL:1000449!5.84e-07!16;CL:1000497!7.45e-07!18;CL:0002518!7.45e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.93e-14;42!CL:0002251;2.67e-09;20!CL:1000449;1.76e-08;15!CL:0002368;2.22e-08;13!CL:1000507;2.95e-08;10!CL:1000494;2.95e-08;10!CL:0002159;3.42e-08;14!CL:1000497;5.19e-08;17!CL:0002518;5.19e-08;17!CL:0002077;4.40e-07;34!CL:0002681;9.70e-07;12!CL:0002584;9.70e-07;12 | |ontology_enrichment_celltype_v019=CL:0002076;1.93e-14;42!CL:0002251;2.67e-09;20!CL:1000449;1.76e-08;15!CL:0002368;2.22e-08;13!CL:1000507;2.95e-08;10!CL:1000494;2.95e-08;10!CL:0002159;3.42e-08;14!CL:1000497;5.19e-08;17!CL:0002518;5.19e-08;17!CL:0002077;4.40e-07;34!CL:0002681;9.70e-07;12!CL:0002584;9.70e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.83e-52,253;CL:0002076,5.72e-19,42;CL:0000223,1.68e-17,58;CL:0002321,2.09e-12,250;CL:0000221,6.45e-10,72;CL:0000076,2.35e-09,63;CL:0002251,2.42e-09,20;CL:1000449,1.28e-08,15;CL:0002368,1.78e-08,13;CL:1000507,2.38e-08,10;CL:1000494,2.38e-08,10;CL:0002159,2.86e-08,14;CL:1000497,4.33e-08,17;CL:0002518,4.33e-08,17;CL:0002077,5.03e-08,34;CL:0002681,8.24e-07,12;CL:0002584,8.24e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;4.77e-09;58 | |ontology_enrichment_development_v019=CL:0000223;4.77e-09;58 | ||
|ontology_enrichment_disease=DOID:305!2.64e-24!106;DOID:0050687!1.91e-23!143;DOID:162!6.33e-10!235;DOID:14566!8.91e-10!239;DOID:1749!7.78e-08!14;DOID:299!3.17e-07!25 | |ontology_enrichment_disease=DOID:305!2.64e-24!106;DOID:0050687!1.91e-23!143;DOID:162!6.33e-10!235;DOID:14566!8.91e-10!239;DOID:1749!7.78e-08!14;DOID:299!3.17e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.09e-09;14!DOID:305;3.63e-08;106!DOID:299;1.44e-07;25 | |ontology_enrichment_disease_v019=DOID:1749;8.09e-09;14!DOID:305;3.63e-08;106!DOID:299;1.44e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.86e-26,106;DOID:0050687,4.75e-24,143;DOID:162,3.46e-11,235;DOID:14566,1.48e-10,239;DOID:1749,6.74e-09,14;DOID:299,8.36e-08,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;1.76e-08;15!UBERON:0004819;1.76e-08;15!UBERON:0001285;1.76e-08;15!UBERON:0007684;1.76e-08;15!UBERON:0004211;2.95e-08;10!UBERON:0009773;2.95e-08;10!UBERON:0001231;2.95e-08;10!UBERON:0004810;2.95e-08;10!UBERON:0006554;3.53e-08;30!UBERON:0001008;3.53e-08;30!UBERON:0001851;1.28e-07;15!UBERON:0000065;1.96e-07;44!UBERON:0000489;6.70e-07;29!UBERON:0000072;8.82e-07;37!UBERON:0001225;9.70e-07;12!UBERON:0008987;9.70e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006555;1.76e-08;15!UBERON:0004819;1.76e-08;15!UBERON:0001285;1.76e-08;15!UBERON:0007684;1.76e-08;15!UBERON:0004211;2.95e-08;10!UBERON:0009773;2.95e-08;10!UBERON:0001231;2.95e-08;10!UBERON:0004810;2.95e-08;10!UBERON:0006554;3.53e-08;30!UBERON:0001008;3.53e-08;30!UBERON:0001851;1.28e-07;15!UBERON:0000065;1.96e-07;44!UBERON:0000489;6.70e-07;29!UBERON:0000072;8.82e-07;37!UBERON:0001225;9.70e-07;12!UBERON:0008987;9.70e-07;12 | ||
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| ||
|short_description=p4@DDR1 | |short_description=p4@DDR1 | ||
}} | }} |
Revision as of 16:49, 15 November 2012
Short description: | p4@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376569, ENST00000376570, ENST00000376575, ENST00000446312, ENST00000504927, ENST00000511510, NM_001954, uc003nrq.2_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | Q08345E7ETI3E7ESR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.83e-52 | 253 |
endo-epithelial cell | 5.72e-19 | 42 |
endodermal cell | 1.68e-17 | 58 |
embryonic cell | 2.09e-12 | 250 |
ectodermal cell | 6.45e-10 | 72 |
squamous epithelial cell | 2.35e-09 | 63 |
epithelial cell of alimentary canal | 2.42e-09 | 20 |
epithelial cell of nephron | 1.28e-08 | 15 |
respiratory epithelial cell | 1.78e-08 | 13 |
kidney tubule cell | 2.38e-08 | 10 |
nephron tubule epithelial cell | 2.38e-08 | 10 |
general ecto-epithelial cell | 2.86e-08 | 14 |
kidney cell | 4.33e-08 | 17 |
kidney epithelial cell | 4.33e-08 | 17 |
ecto-epithelial cell | 5.03e-08 | 34 |
kidney cortical cell | 8.24e-07 | 12 |
renal cortical epithelial cell | 8.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.43e-12 | 160 |
endoderm | 3.43e-12 | 160 |
presumptive endoderm | 3.43e-12 | 160 |
trunk region element | 2.59e-11 | 101 |
urinary system structure | 5.09e-10 | 47 |
respiratory system | 6.11e-10 | 74 |
renal system | 1.45e-09 | 48 |
excretory tube | 7.73e-09 | 16 |
kidney epithelium | 7.73e-09 | 16 |
nephron epithelium | 1.28e-08 | 15 |
renal tubule | 1.28e-08 | 15 |
nephron tubule | 1.28e-08 | 15 |
nephron | 1.28e-08 | 15 |
uriniferous tubule | 1.28e-08 | 15 |
nephrogenic mesenchyme | 1.28e-08 | 15 |
nephron tubule epithelium | 2.38e-08 | 10 |
respiratory primordium | 8.61e-08 | 38 |
endoderm of foregut | 8.61e-08 | 38 |
cortex | 9.49e-08 | 15 |
extraembryonic membrane | 1.05e-07 | 14 |
membranous layer | 1.05e-07 | 14 |
digestive system | 1.23e-07 | 145 |
digestive tract | 1.23e-07 | 145 |
primitive gut | 1.23e-07 | 145 |
embryo | 4.70e-07 | 592 |
respiratory tract | 5.50e-07 | 54 |
cortex of kidney | 8.24e-07 | 12 |
renal parenchyma | 8.24e-07 | 12 |
cavitated compound organ | 9.89e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.86e-26 | 106 |
cell type cancer | 4.75e-24 | 143 |
cancer | 3.46e-11 | 235 |
disease of cellular proliferation | 1.48e-10 | 239 |
squamous cell carcinoma | 6.74e-09 | 14 |
adenocarcinoma | 8.36e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.