FFCP PHASE1:Hg19::chr12:113348868..113348888,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002194!3.02e-23!63;CL:0000576!3.02e-23!63;CL:0000040!3.02e-23!63;CL:0000559!3.02e-23!63;CL:0002009!4.21e-22!65;CL:0000839!1.16e-20!70;CL:0002087!1.76e-20!119;CL:0000557!3.56e-20!71;CL:0002057!7.94e-20!42;CL:0000860!4.44e-19!45;CL:0002031!5.67e-18!124;CL:0000766!6.16e-18!76;CL:0000738!3.16e-16!140;CL:0000037!7.80e-12!172;CL:0000566!7.80e-12!172;CL:0002032!3.62e-11!165;CL:0000837!3.62e-11!165;CL:0000988!3.17e-10!182;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112 | |ontology_enrichment_celltype=CL:0002194!3.02e-23!63;CL:0000576!3.02e-23!63;CL:0000040!3.02e-23!63;CL:0000559!3.02e-23!63;CL:0002009!4.21e-22!65;CL:0000839!1.16e-20!70;CL:0002087!1.76e-20!119;CL:0000557!3.56e-20!71;CL:0002057!7.94e-20!42;CL:0000860!4.44e-19!45;CL:0002031!5.67e-18!124;CL:0000766!6.16e-18!76;CL:0000738!3.16e-16!140;CL:0000037!7.80e-12!172;CL:0000566!7.80e-12!172;CL:0002032!3.62e-11!165;CL:0000837!3.62e-11!165;CL:0000988!3.17e-10!182;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.68e-14;39!CL:0000234;2.68e-14;39!CL:0000860;2.38e-12;33!CL:0002057;2.38e-12;33!CL:0000576;8.67e-10;48!CL:0002379;4.26e-08;1!CL:0000766;9.67e-07;69 | |ontology_enrichment_celltype_v019=CL:0000473;2.68e-14;39!CL:0000234;2.68e-14;39!CL:0000860;2.38e-12;33!CL:0002057;2.38e-12;33!CL:0000576;8.67e-10;48!CL:0002379;4.26e-08;1!CL:0000766;9.67e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.40e-19,48;CL:0000234,1.40e-19,48;CL:0000860,3.79e-16,42;CL:0002057,3.79e-16,42;CL:0002194,3.71e-15,59;CL:0000576,3.71e-15,59;CL:0000040,3.71e-15,59;CL:0000559,3.71e-15,59;CL:0002009,1.38e-14,61;CL:0000839,2.62e-13,66;CL:0000557,4.47e-13,67;CL:0000766,5.23e-12,72;CL:0000763,1.79e-08,108;CL:0000049,1.79e-08,108;CL:0002379,4.28e-08,1;CL:0002087,7.40e-08,115;CL:0002031,2.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.82e-13;42 | |ontology_enrichment_development_v019=CL:0002057;4.82e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;4.26e-08;1!DOID:3565;4.26e-08;1 | |ontology_enrichment_disease_v019=DOID:3620;4.26e-08;1!DOID:3565;4.26e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,4.28e-08,1;DOID:3565,4.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.29e-19!102;UBERON:0003061!4.29e-19!102;UBERON:0002371!1.27e-18!80;UBERON:0001474!2.34e-17!86;UBERON:0002193!6.42e-16!112;UBERON:0004765!2.98e-15!101;UBERON:0001434!2.98e-15!101;UBERON:0002405!9.93e-15!115;UBERON:0002204!8.85e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!4.29e-19!102;UBERON:0003061!4.29e-19!102;UBERON:0002371!1.27e-18!80;UBERON:0001474!2.34e-17!86;UBERON:0002193!6.42e-16!112;UBERON:0004765!2.98e-15!101;UBERON:0001434!2.98e-15!101;UBERON:0002405!9.93e-15!115;UBERON:0002204!8.85e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.43e-07;1!UBERON:0006518;1.43e-07;1!UBERON:0008949;1.43e-07;1!UBERON:0000101;1.43e-07;1!UBERON:0002167;1.43e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.43e-07;1!UBERON:0006518;1.43e-07;1!UBERON:0008949;1.43e-07;1!UBERON:0000101;1.43e-07;1!UBERON:0002167;1.43e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.97e-11,76;UBERON:0001474,2.93e-10,82;UBERON:0002390,1.30e-09,98;UBERON:0003061,1.30e-09,98;UBERON:0004765,3.87e-09,90;UBERON:0002405,9.07e-09,93;UBERON:0002193,1.75e-08,108;UBERON:0001434,5.44e-08,100;UBERON:0002171,1.69e-07,1;UBERON:0006518,1.69e-07,1;UBERON:0008949,1.69e-07,1;UBERON:0000101,1.69e-07,1;UBERON:0002167,1.69e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,1.5369642391746,0.709446689665756,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0,1.31940520074686,2.19410023383795,0.852449501065388,1.16083695451434,1.70215567407342,0,1.50749199154046,1.0429658368404,1.3031330682307,1.21079900526674,0.368277635987565,0.949387162322653,0.422510572623884,1.70083439972035,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0.855038231223746,3.18266683518544,0.182664153764634,0,1.63841583378639,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0,1.15282187753108,0.910415432919148,0.822189523018381,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.232420756919918,0,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89941583410055,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,1.27600463892768,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0.171986032471617,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0,1.17330829640882,0,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,2.68931008999267,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,11.2927593455122,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,4.64999738562288,0,0,0,0,0,1.18259708457151,0,0,0.607719912354764,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.319267718114302,0,0,0,0,0,0,0,1.65085738669511,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.691403925334676,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0.431855182437243,1.9110067515482,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0.357107877211315,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0.358611026963382,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,1.5369642391746,0.709446689665756,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0,1.31940520074686,2.19410023383795,0.852449501065388,1.16083695451434,1.70215567407342,0,1.50749199154046,1.0429658368404,1.3031330682307,1.21079900526674,0.368277635987565,0.949387162322653,0.422510572623884,1.70083439972035,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0.855038231223746,3.18266683518544,0.182664153764634,0,1.63841583378639,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0,1.15282187753108,0.910415432919148,0.822189523018381,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.232420756919918,0,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89941583410055,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,1.27600463892768,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0.171986032471617,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0,1.17330829640882,0,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,2.68931008999267,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,11.2927593455122,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,4.64999738562288,0,0,0,0,0,1.18259708457151,0,0,0.607719912354764,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.319267718114302,0,0,0,0,0,0,0,1.65085738669511,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.691403925334676,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0.431855182437243,1.9110067515482,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0.357107877211315,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0.358611026963382,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p@chr12:113348868..113348888,+ | |short_description=p@chr12:113348868..113348888,+ | ||
}} | }} |
Revision as of 04:39, 16 November 2012
Short description: | p@chr12:113348868..113348888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:113348868..113348888, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.40e-19 | 48 |
phagocyte | 1.40e-19 | 48 |
classical monocyte | 3.79e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-16 | 42 |
monopoietic cell | 3.71e-15 | 59 |
monocyte | 3.71e-15 | 59 |
monoblast | 3.71e-15 | 59 |
promonocyte | 3.71e-15 | 59 |
macrophage dendritic cell progenitor | 1.38e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.62e-13 | 66 |
granulocyte monocyte progenitor cell | 4.47e-13 | 67 |
myeloid leukocyte | 5.23e-12 | 72 |
myeloid cell | 1.79e-08 | 108 |
common myeloid progenitor | 1.79e-08 | 108 |
meningothelial cell | 4.28e-08 | 1 |
nongranular leukocyte | 7.40e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.97e-11 | 76 |
bone element | 2.93e-10 | 82 |
hematopoietic system | 1.30e-09 | 98 |
blood island | 1.30e-09 | 98 |
skeletal element | 3.87e-09 | 90 |
immune system | 9.07e-09 | 93 |
hemolymphoid system | 1.75e-08 | 108 |
skeletal system | 5.44e-08 | 100 |
lower lobe of right lung | 1.69e-07 | 1 |
right lung lobe | 1.69e-07 | 1 |
lower lobe of lung | 1.69e-07 | 1 |
lobe of lung | 1.69e-07 | 1 |
right lung | 1.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.28e-08 | 1 |
meningioma | 4.28e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.