FFCP PHASE1:Hg19::chr1:100643834..100643845,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.59e-12;2 | |ontology_enrichment_disease_v019=DOID:1909;2.59e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.90e-12,2 | |||
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|short_description=p4@LRRC39 | |short_description=p4@LRRC39 | ||
}} | }} |
Revision as of 09:22, 18 November 2012
Short description: | p4@LRRC39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LRRC39_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -34bp_to_uc001dsy.1, uc001dsz.1_5end |
EntrezGene: | LRRC39 |
HGNC: | 28228 |
UniProt: | Q96DD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
pulmonary valve | 5.13e-23 | 1 |
semi-lunar valve | 5.13e-23 | 1 |
diencephalon | 8.94e-14 | 7 |
future diencephalon | 8.94e-14 | 7 |
valve | 1.40e-08 | 3 |
cardiac mesenchyme | 1.40e-08 | 3 |
cardial valve | 1.40e-08 | 3 |
tunica intima | 1.40e-08 | 3 |
heart layer | 1.40e-08 | 3 |
endocardium | 1.40e-08 | 3 |
endocardial cushion | 1.40e-08 | 3 |
presumptive endocardium | 1.40e-08 | 3 |
primary circulatory organ | 6.06e-08 | 27 |
adult organism | 6.19e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.90e-12 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.