FFCP PHASE1:Hg19::chr2:101179263..101179284,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!2.93e-19!45;CL:0002057!3.62e-19!42;CL:0000738!3.25e-18!140;CL:0002087!4.06e-17!119;CL:0002031!7.21e-16!124;CL:0000037!1.21e-13!172;CL:0000566!1.21e-13!172;CL:0002032!1.50e-13!165;CL:0000837!1.50e-13!165;CL:0000766!5.68e-13!76;CL:0002194!9.84e-13!63;CL:0000576!9.84e-13!63;CL:0000040!9.84e-13!63;CL:0000559!9.84e-13!63;CL:0000839!1.38e-12!70;CL:0002009!1.70e-12!65;CL:0000557!2.50e-12!71;CL:0000988!6.48e-12!182;CL:0000763!2.96e-09!112;CL:0000049!2.96e-09!112 | |ontology_enrichment_celltype=CL:0000860!2.93e-19!45;CL:0002057!3.62e-19!42;CL:0000738!3.25e-18!140;CL:0002087!4.06e-17!119;CL:0002031!7.21e-16!124;CL:0000037!1.21e-13!172;CL:0000566!1.21e-13!172;CL:0002032!1.50e-13!165;CL:0000837!1.50e-13!165;CL:0000766!5.68e-13!76;CL:0002194!9.84e-13!63;CL:0000576!9.84e-13!63;CL:0000040!9.84e-13!63;CL:0000559!9.84e-13!63;CL:0000839!1.38e-12!70;CL:0002009!1.70e-12!65;CL:0000557!2.50e-12!71;CL:0000988!6.48e-12!182;CL:0000763!2.96e-09!112;CL:0000049!2.96e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.36e-23;33!CL:0002057;2.36e-23;33!CL:0000473;1.45e-16;39!CL:0000234;1.45e-16;39!CL:0000576;1.13e-13;48!CL:0000766;1.69e-09;69!CL:0002087;1.12e-07;104!CL:0000738;6.34e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.36e-23;33!CL:0002057;2.36e-23;33!CL:0000473;1.45e-16;39!CL:0000234;1.45e-16;39!CL:0000576;1.13e-13;48!CL:0000766;1.69e-09;69!CL:0002087;1.12e-07;104!CL:0000738;6.34e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.51e-27,136;CL:0000860,1.25e-26,42;CL:0002057,1.25e-26,42;CL:0000473,3.80e-23,48;CL:0000234,3.80e-23,48;CL:0002031,8.46e-23,120;CL:0002087,1.04e-22,115;CL:0002032,1.35e-20,161;CL:0000837,1.35e-20,161;CL:0000766,2.15e-20,72;CL:0000037,2.17e-20,168;CL:0000557,5.92e-19,67;CL:0000988,7.90e-19,177;CL:0002009,1.67e-18,61;CL:0002194,2.71e-18,59;CL:0000576,2.71e-18,59;CL:0000040,2.71e-18,59;CL:0000559,2.71e-18,59;CL:0000839,3.03e-18,66;CL:0000763,2.96e-15,108;CL:0000049,2.96e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.97e-19;42 | |ontology_enrichment_development_v019=CL:0002057;7.97e-19;42 | ||
|ontology_enrichment_disease=DOID:305!3.28e-10!106;DOID:0050687!5.65e-07!143 | |ontology_enrichment_disease=DOID:305!3.28e-10!106;DOID:0050687!5.65e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.33e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;1.33e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.23e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.40e-08!80;UBERON:0001474!5.27e-08!86;UBERON:0002390!5.35e-07!102;UBERON:0003061!5.35e-07!102 | |ontology_enrichment_uberon=UBERON:0002371!2.40e-08!80;UBERON:0001474!5.27e-08!86;UBERON:0002390!5.35e-07!102;UBERON:0003061!5.35e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.88e-15,76;UBERON:0001474,7.47e-14,82;UBERON:0002405,4.24e-13,93;UBERON:0002390,1.49e-12,98;UBERON:0003061,1.49e-12,98;UBERON:0004765,3.08e-12,90;UBERON:0002193,1.89e-11,108;UBERON:0001434,8.87e-10,100 | |||
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| ||
|short_description=p3@PDCL3 | |short_description=p3@PDCL3 | ||
}} | }} |
Revision as of 05:56, 19 November 2012
Short description: | p3@PDCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PDCL3_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 111bp_to_ENST00000264254_5end |
EntrezGene: | PDCL3 |
HGNC: | 28860 |
UniProt: | Q9H2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.51e-27 | 136 |
classical monocyte | 1.25e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-26 | 42 |
defensive cell | 3.80e-23 | 48 |
phagocyte | 3.80e-23 | 48 |
hematopoietic lineage restricted progenitor cell | 8.46e-23 | 120 |
nongranular leukocyte | 1.04e-22 | 115 |
hematopoietic oligopotent progenitor cell | 1.35e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-20 | 161 |
myeloid leukocyte | 2.15e-20 | 72 |
hematopoietic stem cell | 2.17e-20 | 168 |
granulocyte monocyte progenitor cell | 5.92e-19 | 67 |
hematopoietic cell | 7.90e-19 | 177 |
macrophage dendritic cell progenitor | 1.67e-18 | 61 |
monopoietic cell | 2.71e-18 | 59 |
monocyte | 2.71e-18 | 59 |
monoblast | 2.71e-18 | 59 |
promonocyte | 2.71e-18 | 59 |
myeloid lineage restricted progenitor cell | 3.03e-18 | 66 |
myeloid cell | 2.96e-15 | 108 |
common myeloid progenitor | 2.96e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.88e-15 | 76 |
bone element | 7.47e-14 | 82 |
immune system | 4.24e-13 | 93 |
hematopoietic system | 1.49e-12 | 98 |
blood island | 1.49e-12 | 98 |
skeletal element | 3.08e-12 | 90 |
hemolymphoid system | 1.89e-11 | 108 |
skeletal system | 8.87e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.23e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.