FFCP PHASE1:Hg19::chr8:30585217..30585254,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000988!3.06e-12!182;CL:0000037!4.19e-12!172;CL:0000566!4.19e-12!172;CL:0002032!7.21e-12!165;CL:0000837!7.21e-12!165;CL:0000766!1.05e-11!76;CL:0000763!9.43e-11!112;CL:0000049!9.43e-11!112;CL:0000557!1.04e-10!71;CL:0000839!1.38e-10!70;CL:0002087!2.10e-10!119;CL:0000738!4.36e-10!140;CL:0002194!1.43e-09!63;CL:0000576!1.43e-09!63;CL:0000040!1.43e-09!63;CL:0000559!1.43e-09!63;CL:0002031!1.60e-09!124;CL:0002009!2.94e-08!65;CL:0000115!8.93e-08!35;CL:0002057!7.28e-07!42 | |ontology_enrichment_celltype=CL:0000988!3.06e-12!182;CL:0000037!4.19e-12!172;CL:0000566!4.19e-12!172;CL:0002032!7.21e-12!165;CL:0000837!7.21e-12!165;CL:0000766!1.05e-11!76;CL:0000763!9.43e-11!112;CL:0000049!9.43e-11!112;CL:0000557!1.04e-10!71;CL:0000839!1.38e-10!70;CL:0002087!2.10e-10!119;CL:0000738!4.36e-10!140;CL:0002194!1.43e-09!63;CL:0000576!1.43e-09!63;CL:0000040!1.43e-09!63;CL:0000559!1.43e-09!63;CL:0002031!1.60e-09!124;CL:0002009!2.94e-08!65;CL:0000115!8.93e-08!35;CL:0002057!7.28e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-08;39!CL:0000234;1.20e-08;39!CL:0000860;6.80e-08;33!CL:0002057;6.80e-08;33!CL:0000115;4.02e-07;36 | |ontology_enrichment_celltype_v019=CL:0000473;1.20e-08;39!CL:0000234;1.20e-08;39!CL:0000860;6.80e-08;33!CL:0002057;6.80e-08;33!CL:0000115;4.02e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.47e-13,72;CL:0000037,8.30e-13,168;CL:0000988,9.62e-13,177;CL:0002032,1.40e-12,161;CL:0000837,1.40e-12,161;CL:0000557,6.66e-12,67;CL:0000839,9.29e-12,66;CL:0000763,1.28e-11,108;CL:0000049,1.28e-11,108;CL:0002087,3.50e-11,115;CL:0000738,8.56e-11,136;CL:0002194,9.65e-11,59;CL:0000576,9.65e-11,59;CL:0000040,9.65e-11,59;CL:0000559,9.65e-11,59;CL:0002031,3.03e-10,120;CL:0002009,2.74e-09,61;CL:0000473,9.70e-09,48;CL:0000234,9.70e-09,48;CL:0000115,5.87e-08,36;CL:0000860,7.28e-07,42;CL:0002057,7.28e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.68e-15!115;UBERON:0002193!2.24e-12!112;UBERON:0002390!1.99e-11!102;UBERON:0003061!1.99e-11!102;UBERON:0002371!8.53e-10!80;UBERON:0001474!1.80e-09!86;UBERON:0002417!9.19e-08!61;UBERON:0000916!9.19e-08!61;UBERON:0005172!1.42e-07!55;UBERON:0005173!1.42e-07!55;UBERON:0004765!7.79e-07!101;UBERON:0001434!7.79e-07!101 | |ontology_enrichment_uberon=UBERON:0002405!2.68e-15!115;UBERON:0002193!2.24e-12!112;UBERON:0002390!1.99e-11!102;UBERON:0003061!1.99e-11!102;UBERON:0002371!8.53e-10!80;UBERON:0001474!1.80e-09!86;UBERON:0002417!9.19e-08!61;UBERON:0000916!9.19e-08!61;UBERON:0005172!1.42e-07!55;UBERON:0005173!1.42e-07!55;UBERON:0004765!7.79e-07!101;UBERON:0001434!7.79e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.52e-13,108;UBERON:0002405,8.80e-13,93;UBERON:0002390,2.20e-12,98;UBERON:0003061,2.20e-12,98;UBERON:0002371,8.28e-11,76;UBERON:0001474,2.09e-10,82;UBERON:0004765,4.10e-09,90;UBERON:0002417,5.16e-08,60;UBERON:0000916,5.16e-08,60;UBERON:0005172,7.72e-08,54;UBERON:0005173,7.72e-08,54;UBERON:0001434,1.68e-07,100 | |||
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| ||
|short_description=p2@GSR | |short_description=p2@GSR | ||
}} | }} |
Revision as of 08:19, 19 November 2012
Short description: | p2@GSR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GSR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414019, ENST00000520888_5end |
EntrezGene: | GSR |
HGNC: | 4623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.47e-13 | 72 |
hematopoietic stem cell | 8.30e-13 | 168 |
hematopoietic cell | 9.62e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.40e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-12 | 161 |
granulocyte monocyte progenitor cell | 6.66e-12 | 67 |
myeloid lineage restricted progenitor cell | 9.29e-12 | 66 |
myeloid cell | 1.28e-11 | 108 |
common myeloid progenitor | 1.28e-11 | 108 |
nongranular leukocyte | 3.50e-11 | 115 |
leukocyte | 8.56e-11 | 136 |
monopoietic cell | 9.65e-11 | 59 |
monocyte | 9.65e-11 | 59 |
monoblast | 9.65e-11 | 59 |
promonocyte | 9.65e-11 | 59 |
hematopoietic lineage restricted progenitor cell | 3.03e-10 | 120 |
macrophage dendritic cell progenitor | 2.74e-09 | 61 |
defensive cell | 9.70e-09 | 48 |
phagocyte | 9.70e-09 | 48 |
endothelial cell | 5.87e-08 | 36 |
classical monocyte | 7.28e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.52e-13 | 108 |
immune system | 8.80e-13 | 93 |
hematopoietic system | 2.20e-12 | 98 |
blood island | 2.20e-12 | 98 |
bone marrow | 8.28e-11 | 76 |
bone element | 2.09e-10 | 82 |
skeletal element | 4.10e-09 | 90 |
abdominal segment of trunk | 5.16e-08 | 60 |
abdomen | 5.16e-08 | 60 |
abdomen element | 7.72e-08 | 54 |
abdominal segment element | 7.72e-08 | 54 |
skeletal system | 1.68e-07 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.