FFCP PHASE1:Hg19::chr17:63052777..63052871,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.44e-46!140;CL:0002031!1.24e-36!124;CL:0002087!3.28e-35!119;CL:0000766!3.04e-34!76;CL:0000037!2.61e-32!172;CL:0000566!2.61e-32!172;CL:0000557!5.80e-31!71;CL:0002032!2.97e-30!165;CL:0000837!2.97e-30!165;CL:0000988!3.88e-29!182;CL:0000839!9.29e-29!70;CL:0002009!1.90e-28!65;CL:0002194!4.24e-27!63;CL:0000576!4.24e-27!63;CL:0000040!4.24e-27!63;CL:0000559!4.24e-27!63;CL:0002057!6.72e-26!42;CL:0000860!1.90e-22!45;CL:0000763!2.20e-21!112;CL:0000049!2.20e-21!112;CL:0000542!2.44e-08!53;CL:0000051!2.44e-08!53;CL:0000838!3.77e-08!52;CL:0000451!1.91e-07!10 | |ontology_enrichment_celltype=CL:0000738!1.44e-46!140;CL:0002031!1.24e-36!124;CL:0002087!3.28e-35!119;CL:0000766!3.04e-34!76;CL:0000037!2.61e-32!172;CL:0000566!2.61e-32!172;CL:0000557!5.80e-31!71;CL:0002032!2.97e-30!165;CL:0000837!2.97e-30!165;CL:0000988!3.88e-29!182;CL:0000839!9.29e-29!70;CL:0002009!1.90e-28!65;CL:0002194!4.24e-27!63;CL:0000576!4.24e-27!63;CL:0000040!4.24e-27!63;CL:0000559!4.24e-27!63;CL:0002057!6.72e-26!42;CL:0000860!1.90e-22!45;CL:0000763!2.20e-21!112;CL:0000049!2.20e-21!112;CL:0000542!2.44e-08!53;CL:0000051!2.44e-08!53;CL:0000838!3.77e-08!52;CL:0000451!1.91e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;9.09e-19;39!CL:0000234;9.09e-19;39!CL:0000576;1.20e-17;48!CL:0000766;3.75e-16;69!CL:0002087;4.44e-11;104!CL:0000738;2.06e-10;136!CL:0000451;1.91e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;9.09e-19;39!CL:0000234;9.09e-19;39!CL:0000576;1.20e-17;48!CL:0000766;3.75e-16;69!CL:0002087;4.44e-11;104!CL:0000738;2.06e-10;136!CL:0000451;1.91e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.70e-49,136;CL:0002031,2.46e-39,120;CL:0000766,5.63e-38,72;CL:0002087,6.40e-38,115;CL:0000557,1.29e-34,67;CL:0000037,2.83e-34,168;CL:0000839,2.98e-32,66;CL:0002032,3.45e-32,161;CL:0000837,3.45e-32,161;CL:0002009,4.03e-32,61;CL:0000988,2.62e-31,177;CL:0002194,9.96e-31,59;CL:0000576,9.96e-31,59;CL:0000040,9.96e-31,59;CL:0000559,9.96e-31,59;CL:0000473,1.27e-28,48;CL:0000234,1.27e-28,48;CL:0000860,6.72e-26,42;CL:0002057,6.72e-26,42;CL:0000763,2.24e-23,108;CL:0000049,2.24e-23,108;CL:0000542,2.44e-08,53;CL:0000051,2.44e-08,53;CL:0000838,3.77e-08,52;CL:0000451,1.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-19;42!CL:0000049;5.78e-07;108 | |ontology_enrichment_development_v019=CL:0002057;6.78e-19;42!CL:0000049;5.78e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.71e-34!102;UBERON:0003061!7.71e-34!102;UBERON:0002193!8.53e-33!112;UBERON:0002371!7.22e-26!80;UBERON:0001474!1.64e-25!86;UBERON:0002405!6.04e-21!115;UBERON:0004765!5.94e-20!101;UBERON:0001434!5.94e-20!101;UBERON:0007023!3.13e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!7.71e-34!102;UBERON:0003061!7.71e-34!102;UBERON:0002193!8.53e-33!112;UBERON:0002371!7.22e-26!80;UBERON:0001474!1.64e-25!86;UBERON:0002405!6.04e-21!115;UBERON:0004765!5.94e-20!101;UBERON:0001434!5.94e-20!101;UBERON:0007023!3.13e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.59e-37,98;UBERON:0003061,8.59e-37,98;UBERON:0002193,1.73e-35,108;UBERON:0002405,1.68e-29,93;UBERON:0002371,8.76e-29,76;UBERON:0001474,3.03e-28,82;UBERON:0004765,1.27e-23,90;UBERON:0001434,2.79e-20,100;UBERON:0007023,4.21e-09,114;UBERON:0003081,4.58e-08,203 | |||
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| ||
|short_description=p1@GNA13 | |short_description=p1@GNA13 | ||
}} | }} |
Revision as of 11:43, 19 November 2012
Short description: | p1@GNA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GNA13_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 48bp_to_ENST00000239138, ENST00000439174, NM_006572, uc002jfc.2_5end |
EntrezGene: | GNA13 |
HGNC: | 4381 |
UniProt: | F8W818Q14344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.70e-49 | 136 |
hematopoietic lineage restricted progenitor cell | 2.46e-39 | 120 |
myeloid leukocyte | 5.63e-38 | 72 |
nongranular leukocyte | 6.40e-38 | 115 |
granulocyte monocyte progenitor cell | 1.29e-34 | 67 |
hematopoietic stem cell | 2.83e-34 | 168 |
myeloid lineage restricted progenitor cell | 2.98e-32 | 66 |
hematopoietic oligopotent progenitor cell | 3.45e-32 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-32 | 161 |
macrophage dendritic cell progenitor | 4.03e-32 | 61 |
hematopoietic cell | 2.62e-31 | 177 |
monopoietic cell | 9.96e-31 | 59 |
monocyte | 9.96e-31 | 59 |
monoblast | 9.96e-31 | 59 |
promonocyte | 9.96e-31 | 59 |
defensive cell | 1.27e-28 | 48 |
phagocyte | 1.27e-28 | 48 |
classical monocyte | 6.72e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.72e-26 | 42 |
myeloid cell | 2.24e-23 | 108 |
common myeloid progenitor | 2.24e-23 | 108 |
lymphocyte | 2.44e-08 | 53 |
common lymphoid progenitor | 2.44e-08 | 53 |
lymphoid lineage restricted progenitor cell | 3.77e-08 | 52 |
dendritic cell | 1.91e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.59e-37 | 98 |
blood island | 8.59e-37 | 98 |
hemolymphoid system | 1.73e-35 | 108 |
immune system | 1.68e-29 | 93 |
bone marrow | 8.76e-29 | 76 |
bone element | 3.03e-28 | 82 |
skeletal element | 1.27e-23 | 90 |
skeletal system | 2.79e-20 | 100 |
adult organism | 4.21e-09 | 114 |
lateral plate mesoderm | 4.58e-08 | 203 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.