FFCP PHASE1:Hg19::chr13:86373536..86373560,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!7.29e-08!43 | |ontology_enrichment_celltype=CL:0002076!7.29e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.33e-08;42!CL:0002251;6.25e-08;20!CL:0000349;7.59e-08;19 | |ontology_enrichment_celltype_v019=CL:0002076;1.33e-08;42!CL:0002251;6.25e-08;20!CL:0000349;7.59e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.38e-10,42;CL:0000223,6.84e-09,58;CL:0002251,6.19e-08,20;CL:0000349,7.55e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3905;9.25e-08;9!DOID:1749;1.04e-07;14 | |ontology_enrichment_disease_v019=DOID:3905;9.25e-08;9!DOID:1749;1.04e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,8.48e-08,14;DOID:3905,9.34e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.44e-17!169;UBERON:0000925!1.44e-17!169;UBERON:0006595!1.44e-17!169;UBERON:0001007!6.05e-13!155;UBERON:0001555!6.05e-13!155;UBERON:0007026!6.05e-13!155;UBERON:0004921!5.96e-10!129;UBERON:0004185!5.96e-10!129;UBERON:0005631!2.53e-09!14;UBERON:0000158!2.53e-09!14;UBERON:0000077!3.36e-09!130;UBERON:0001004!1.46e-08!72;UBERON:0005911!1.68e-08!82;UBERON:0007023!2.80e-07!115;UBERON:0000924!3.44e-07!173;UBERON:0006601!3.44e-07!173;UBERON:0005153!3.80e-07!37;UBERON:0003124!7.82e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!1.44e-17!169;UBERON:0000925!1.44e-17!169;UBERON:0006595!1.44e-17!169;UBERON:0001007!6.05e-13!155;UBERON:0001555!6.05e-13!155;UBERON:0007026!6.05e-13!155;UBERON:0004921!5.96e-10!129;UBERON:0004185!5.96e-10!129;UBERON:0005631!2.53e-09!14;UBERON:0000158!2.53e-09!14;UBERON:0000077!3.36e-09!130;UBERON:0001004!1.46e-08!72;UBERON:0005911!1.68e-08!82;UBERON:0007023!2.80e-07!115;UBERON:0000924!3.44e-07!173;UBERON:0006601!3.44e-07!173;UBERON:0005153!3.80e-07!37;UBERON:0003124!7.82e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.05e-10;10!UBERON:0000158;5.05e-10;10!UBERON:0000305;4.82e-08;7!UBERON:0000160;8.82e-08;17!UBERON:0004921;1.86e-07;33!UBERON:0002050;2.18e-07;5!UBERON:0005423;2.18e-07;5!UBERON:0000922;5.83e-07;49!UBERON:0001004;7.31e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0005631;5.05e-10;10!UBERON:0000158;5.05e-10;10!UBERON:0000305;4.82e-08;7!UBERON:0000160;8.82e-08;17!UBERON:0004921;1.86e-07;33!UBERON:0002050;2.18e-07;5!UBERON:0005423;2.18e-07;5!UBERON:0000922;5.83e-07;49!UBERON:0001004;7.31e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.76e-15,160;UBERON:0000925,6.76e-15,160;UBERON:0006595,6.76e-15,160;UBERON:0005631,2.25e-11,14;UBERON:0000158,2.25e-11,14;UBERON:0001007,6.16e-11,145;UBERON:0001555,6.16e-11,145;UBERON:0007026,6.16e-11,145;UBERON:0004921,2.68e-10,118;UBERON:0001004,6.28e-10,74;UBERON:0000161,1.52e-08,36;UBERON:0000305,4.91e-08,7;UBERON:0000160,8.12e-08,17;UBERON:0011216,5.05e-07,223;UBERON:0004871,5.85e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.24259293112413,5.53910654279752,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0,0.175669571386252,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,1.14721838155602,0,0,0.348581828608555,1.0366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0.658501712451753,0,0,4.44424536760942,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,2.01578553838631,0.141775097242386,0.358234090811393,0,0.383382679165211,0.492663237895943,0,1.86595303986695,2.01767934783746,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.585707074963566,0.601892199455438,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.909382714338778,19.9722527412596,4.23346410661552,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,6.41620704970512,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0.183138929636687,0.660075999364704,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.890320356467374,7.27253627588304,3.45942121257191,3.1903178123646,4.8555734810664,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,0,0.847294206991012,0.86101074534246,0,0.886860307073351,4.59446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,3.58116727106535,14.5512693607993,11.6721066797708,0,0,0.111308705022906,0,0,0.19924798825107,2.21027132424918,0.251932747854276,0,0,0,0,0,0,10.6534878087888,0,0,0,0,0,1.04171104434093,0.349839999984783,0,2.50345586228099,5.33932665614809,0.472775363535873,0,0.291604613383254,0.347249989866585,5.31444831488303,1.4471572635049,0,1.43753037910592,0.591095237907095,0.219385397153973,0,0.557694977114413,0.0769502585037971,0,0,0,0,1.5950057986596,0.732780747214898,7.46248686426089,0,0,0.166211681900156,0,0,0,0.75901493089674,5.56278026431325,0,0,0,8.43915694994155,0.995261931078505,1.94606641907346,1.22206028986725,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0.978323094660449,0,0,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0.661983911750998,0.313932918407225,0,0,19.1371048758131,0,0,0.0870592065804026,1.22308667769421,1.20390222730132,0,0,0,0.872901148395775,0.441280633457501,5.19755703795225,0,0,0.0633107959558787,0.391102765469606,0.160317640503067,0,0.799238438328521,0,0,0.686379991447858,0.14405479798815,0,0,0,0,0.101998217636322,0.288950589901519,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0.599037001496973,0,0,0.739018197353989,0,0,0,0,0,1.87012214878023,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0.670869375198532,0,0.472091293214983,1.05600336519407,0,3.64638874906946,0.714695326373367,0,17.0359920228682,0,0,0,0,0.082092520749339,0,0,0.439656701034247,2.65013777824443,0,0.52893040697076,0,2.11444506695002,0.961086713109252,11.1615056620763,0.414239055347196,0,0,0,5.74507131993164,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,12.9979624280591,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,6.30924491143255,0,0,0.782982875895635,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0.184105950251841,0.419638523158333,2.48830904013189,0,0,0.157265941855896,2.18419276384028,4.58277830875868,11.9041955256942,4.33775174906508,0.558644917973244,0,0,0.80057074828547,1.41070377476274,11.9435736167748,0.449604575675217,0,0,0,0,0,0,0,2.64998839952769,1.41563668017288,0,0,0,0,0.994581110581374,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0,1.64092442705466,0.548257766857182,2.97726707033577,0.527613733078862,1.91643641459393,3.74991285114801,18.8318884442541,0,0.227662191351298,0.620916591138472,0,8.57440047187092,0.0679697329768317,0,0,1.11231401892069,8.00629547075243,1.41404030924402,0,3.65263488203798,4.96633459802829,0,1.50100742770978,0,0.464965701472501,0.173858272302579,0,3.31545862660859,1.0243108625637,0,2.58136415292167,0,0,0,0,0.310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| ||
|short_description=p2@SLITRK6 | |short_description=p2@SLITRK6 | ||
}} | }} | ||
Revision as of 01:19, 20 November 2012
| Short description: | p2@SLITRK6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_SLITRK6_5end |
| Coexpression cluster: | C1710_Placental_endometrial_amniotic_smallcell_leiomyoblastoma_pineal_malignant |
| Association with transcript: | -53bp_to_NM_032229, uc001vll.1_5end |
| EntrezGene: | SLITRK6 |
| HGNC: | 23503 |
| UniProt: | Q9H5Y7 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 6.38e-10 | 42 |
| endodermal cell | 6.84e-09 | 58 |
| epithelial cell of alimentary canal | 6.19e-08 | 20 |
| extraembryonic cell | 7.55e-08 | 19 |
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 6.76e-15 | 160 |
| endoderm | 6.76e-15 | 160 |
| presumptive endoderm | 6.76e-15 | 160 |
| extraembryonic membrane | 2.25e-11 | 14 |
| membranous layer | 2.25e-11 | 14 |
| digestive system | 6.16e-11 | 145 |
| digestive tract | 6.16e-11 | 145 |
| primitive gut | 6.16e-11 | 145 |
| subdivision of digestive tract | 2.68e-10 | 118 |
| respiratory system | 6.28e-10 | 74 |
| orifice | 1.52e-08 | 36 |
| amnion | 4.91e-08 | 7 |
| intestine | 8.12e-08 | 17 |
| organ system subdivision | 5.05e-07 | 223 |
| somatic layer of lateral plate mesoderm | 5.85e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 8.48e-08 | 14 |
| lung carcinoma | 9.34e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
