FFCP PHASE1:Hg19::chr2:220117988..220118034,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.64e-15!254;CL:0000012!9.68e-12!682;CL:0000548!2.37e-11!679;CL:0000004!2.37e-11!679;CL:0000255!2.37e-11!679;CL:0000220!3.04e-10!246;CL:0002321!3.26e-10!248;CL:0000003!9.04e-10!722;CL:0002076!1.71e-08!43 | |ontology_enrichment_celltype=CL:0000066!1.64e-15!254;CL:0000012!9.68e-12!682;CL:0000548!2.37e-11!679;CL:0000004!2.37e-11!679;CL:0000255!2.37e-11!679;CL:0000220!3.04e-10!246;CL:0002321!3.26e-10!248;CL:0000003!9.04e-10!722;CL:0002076!1.71e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.83e-08;13!CL:0002159;8.94e-08;14!CL:0002076;3.84e-07;42!CL:1000507;5.80e-07;10!CL:1000494;5.80e-07;10 | |ontology_enrichment_celltype_v019=CL:0002368;1.83e-08;13!CL:0002159;8.94e-08;14!CL:0002076;3.84e-07;42!CL:1000507;5.80e-07;10!CL:1000494;5.80e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-15,253;CL:0002321,6.79e-10,250;CL:0002076,6.58e-09,42;CL:0002368,2.79e-08,13;CL:0002159,1.10e-07,14;CL:1000507,6.04e-07,10;CL:1000494,6.04e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.02e-11!82;UBERON:0005256!4.51e-10!143;UBERON:0003104!1.42e-09!238;UBERON:0009142!1.42e-09!238;UBERON:0000914!4.03e-09!83;UBERON:0002329!4.03e-09!83;UBERON:0003077!4.03e-09!83;UBERON:0003059!4.03e-09!83;UBERON:0007282!4.03e-09!83;UBERON:0009618!4.03e-09!83;UBERON:0007285!4.03e-09!83;UBERON:0008947!2.53e-08!38;UBERON:0003258!2.53e-08!38;UBERON:0001004!3.72e-08!72;UBERON:0000065!4.91e-08!53;UBERON:0004119!1.49e-07!169;UBERON:0000925!1.49e-07!169;UBERON:0006595!1.49e-07!169;UBERON:0004290!2.49e-07!70;UBERON:0002100!2.53e-07!216;UBERON:0000072!2.56e-07!46;UBERON:0000481!4.64e-07!347 | |ontology_enrichment_uberon=UBERON:0000486!5.02e-11!82;UBERON:0005256!4.51e-10!143;UBERON:0003104!1.42e-09!238;UBERON:0009142!1.42e-09!238;UBERON:0000914!4.03e-09!83;UBERON:0002329!4.03e-09!83;UBERON:0003077!4.03e-09!83;UBERON:0003059!4.03e-09!83;UBERON:0007282!4.03e-09!83;UBERON:0009618!4.03e-09!83;UBERON:0007285!4.03e-09!83;UBERON:0008947!2.53e-08!38;UBERON:0003258!2.53e-08!38;UBERON:0001004!3.72e-08!72;UBERON:0000065!4.91e-08!53;UBERON:0004119!1.49e-07!169;UBERON:0000925!1.49e-07!169;UBERON:0006595!1.49e-07!169;UBERON:0004290!2.49e-07!70;UBERON:0002100!2.53e-07!216;UBERON:0000072!2.56e-07!46;UBERON:0000481!4.64e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.45e-08;37!UBERON:0000065;1.05e-07;44!UBERON:0001737;2.45e-07;9!UBERON:0001557;2.45e-07;9!UBERON:0004211;5.80e-07;10!UBERON:0009773;5.80e-07;10!UBERON:0001231;5.80e-07;10!UBERON:0004810;5.80e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000072;1.45e-08;37!UBERON:0000065;1.05e-07;44!UBERON:0001737;2.45e-07;9!UBERON:0001557;2.45e-07;9!UBERON:0004211;5.80e-07;10!UBERON:0009773;5.80e-07;10!UBERON:0001231;5.80e-07;10!UBERON:0004810;5.80e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.89e-10,83;UBERON:0008947,3.22e-08,38;UBERON:0003258,3.22e-08,38;UBERON:0007503,1.06e-07,78;UBERON:0001004,1.82e-07,74;UBERON:0004119,1.87e-07,160;UBERON:0000925,1.87e-07,160;UBERON:0006595,1.87e-07,160;UBERON:0001737,2.34e-07,9;UBERON:0000065,2.58e-07,54;UBERON:0004810,6.04e-07,10;UBERON:0002329,8.50e-07,71;UBERON:0003059,8.50e-07,71;UBERON:0007282,8.50e-07,71;UBERON:0004290,8.50e-07,71;UBERON:0009618,8.50e-07,71;UBERON:0000072,9.53e-07,47;UBERON:0005256,9.72e-07,122 | |||
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| ||
|short_description=p2@TUBA4A | |short_description=p2@TUBA4A | ||
}} | }} |
Revision as of 03:28, 20 November 2012
Short description: | p2@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TUBA4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000447205_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | C9JEV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.62e-15 | 253 |
embryonic cell | 6.79e-10 | 250 |
endo-epithelial cell | 6.58e-09 | 42 |
respiratory epithelial cell | 2.79e-08 | 13 |
general ecto-epithelial cell | 1.10e-07 | 14 |
kidney tubule cell | 6.04e-07 | 10 |
nephron tubule epithelial cell | 6.04e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.89e-10 | 83 |
respiratory primordium | 3.22e-08 | 38 |
endoderm of foregut | 3.22e-08 | 38 |
epithelial vesicle | 1.06e-07 | 78 |
respiratory system | 1.82e-07 | 74 |
endoderm-derived structure | 1.87e-07 | 160 |
endoderm | 1.87e-07 | 160 |
presumptive endoderm | 1.87e-07 | 160 |
larynx | 2.34e-07 | 9 |
respiratory tract | 2.58e-07 | 54 |
nephron tubule epithelium | 6.04e-07 | 10 |
somite | 8.50e-07 | 71 |
presomitic mesoderm | 8.50e-07 | 71 |
presumptive segmental plate | 8.50e-07 | 71 |
dermomyotome | 8.50e-07 | 71 |
trunk paraxial mesoderm | 8.50e-07 | 71 |
segment of respiratory tract | 9.53e-07 | 47 |
trunk mesenchyme | 9.72e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.