FFCP PHASE1:Hg19::chr12:46384304..46384333,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.51e-20!140;CL:0000766!2.23e-20!76;CL:0000037!4.24e-20!172;CL:0000566!4.24e-20!172;CL:0000557!7.49e-19!71;CL:0002032!2.08e-18!165;CL:0000837!2.08e-18!165;CL:0002009!3.75e-18!65;CL:0000763!4.84e-18!112;CL:0000049!4.84e-18!112;CL:0000988!6.96e-18!182;CL:0000839!2.22e-17!70;CL:0002194!2.82e-17!63;CL:0000576!2.82e-17!63;CL:0000040!2.82e-17!63;CL:0000559!2.82e-17!63;CL:0002031!5.70e-17!124;CL:0002087!1.28e-16!119;CL:0000860!1.39e-16!45;CL:0002057!4.97e-16!42 | |ontology_enrichment_celltype=CL:0000738!1.51e-20!140;CL:0000766!2.23e-20!76;CL:0000037!4.24e-20!172;CL:0000566!4.24e-20!172;CL:0000557!7.49e-19!71;CL:0002032!2.08e-18!165;CL:0000837!2.08e-18!165;CL:0002009!3.75e-18!65;CL:0000763!4.84e-18!112;CL:0000049!4.84e-18!112;CL:0000988!6.96e-18!182;CL:0000839!2.22e-17!70;CL:0002194!2.82e-17!63;CL:0000576!2.82e-17!63;CL:0000040!2.82e-17!63;CL:0000559!2.82e-17!63;CL:0002031!5.70e-17!124;CL:0002087!1.28e-16!119;CL:0000860!1.39e-16!45;CL:0002057!4.97e-16!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-16;33!CL:0002057;6.10e-16;33!CL:0000473;1.93e-12;39!CL:0000234;1.93e-12;39!CL:0000576;4.69e-11;48!CL:0000766;1.52e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.10e-16;33!CL:0002057;6.10e-16;33!CL:0000473;1.93e-12;39!CL:0000234;1.93e-12;39!CL:0000576;4.69e-11;48!CL:0000766;1.52e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.47e-19,136;CL:0000766,2.08e-19,72;CL:0000037,3.98e-19,168;CL:0000557,6.79e-18,67;CL:0000988,1.71e-17,177;CL:0002032,1.82e-17,161;CL:0000837,1.82e-17,161;CL:0002009,3.30e-17,61;CL:0000763,4.44e-17,108;CL:0000049,4.44e-17,108;CL:0000839,1.98e-16,66;CL:0002194,2.46e-16,59;CL:0000576,2.46e-16,59;CL:0000040,2.46e-16,59;CL:0000559,2.46e-16,59;CL:0002031,4.95e-16,120;CL:0000860,4.96e-16,42;CL:0002057,4.96e-16,42;CL:0002087,1.10e-15,115;CL:0000473,5.82e-15,48;CL:0000234,5.82e-15,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.24e-12;42 | |ontology_enrichment_development_v019=CL:0002057;3.24e-12;42 | ||
|ontology_enrichment_disease=DOID:162!1.41e-07!235;DOID:305!9.36e-07!106 | |ontology_enrichment_disease=DOID:162!1.41e-07!235;DOID:305!9.36e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.43e-07,235;DOID:305,9.51e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.85e-15!102;UBERON:0003061!1.85e-15!102;UBERON:0001474!2.33e-14!86;UBERON:0002371!4.48e-14!80;UBERON:0002193!2.78e-12!112;UBERON:0002405!1.77e-11!115;UBERON:0004765!5.45e-11!101;UBERON:0001434!5.45e-11!101 | |ontology_enrichment_uberon=UBERON:0002390!1.85e-15!102;UBERON:0003061!1.85e-15!102;UBERON:0001474!2.33e-14!86;UBERON:0002371!4.48e-14!80;UBERON:0002193!2.78e-12!112;UBERON:0002405!1.77e-11!115;UBERON:0004765!5.45e-11!101;UBERON:0001434!5.45e-11!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.57e-14,98;UBERON:0003061,1.57e-14,98;UBERON:0001474,1.95e-13,82;UBERON:0002371,3.74e-13,76;UBERON:0004765,1.29e-11,90;UBERON:0002193,1.94e-11,108;UBERON:0002405,4.60e-10,93;UBERON:0001434,4.57e-09,100 | |||
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| ||
|short_description=p2@SCAF11 | |short_description=p2@SCAF11 | ||
}} | }} |
Revision as of 06:54, 20 November 2012
Short description: | p2@SCAF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SCAF11_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000266589, ENST00000369367_5end |
EntrezGene: | SCAF11 |
HGNC: | 10784 |
UniProt: | F8W6K1Q99590 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.47e-19 | 136 |
myeloid leukocyte | 2.08e-19 | 72 |
hematopoietic stem cell | 3.98e-19 | 168 |
granulocyte monocyte progenitor cell | 6.79e-18 | 67 |
hematopoietic cell | 1.71e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.82e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-17 | 161 |
macrophage dendritic cell progenitor | 3.30e-17 | 61 |
myeloid cell | 4.44e-17 | 108 |
common myeloid progenitor | 4.44e-17 | 108 |
myeloid lineage restricted progenitor cell | 1.98e-16 | 66 |
monopoietic cell | 2.46e-16 | 59 |
monocyte | 2.46e-16 | 59 |
monoblast | 2.46e-16 | 59 |
promonocyte | 2.46e-16 | 59 |
hematopoietic lineage restricted progenitor cell | 4.95e-16 | 120 |
classical monocyte | 4.96e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.96e-16 | 42 |
nongranular leukocyte | 1.10e-15 | 115 |
defensive cell | 5.82e-15 | 48 |
phagocyte | 5.82e-15 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.57e-14 | 98 |
blood island | 1.57e-14 | 98 |
bone element | 1.95e-13 | 82 |
bone marrow | 3.74e-13 | 76 |
skeletal element | 1.29e-11 | 90 |
hemolymphoid system | 1.94e-11 | 108 |
immune system | 4.60e-10 | 93 |
skeletal system | 4.57e-09 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.