FFCP PHASE1:Mm9::chr15:79913772..79913789,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr15:79913772..79913789,- | |id=chr15:79913772..79913789,- | ||
|ontology_enrichment_celltype=CL:0000988!4.62e-13!32;CL:0002032!4.62e-13!32;CL:0000037!4.62e-13!32;CL:0000566!4.62e-13!32;CL:0000837!4.62e-13!32;CL:0002031!6.89e-10!25;CL:0000542!4.84e-08!13;CL:0000051!4.84e-08!13;CL:0000838!8.83e-08!12;CL:0002320!2.91e-07!46;CL:0000134!2.91e-07!46;CL:0000084!3.52e-07!11;CL:0000827!3.52e-07!11;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9 | |ontology_enrichment_celltype=CL:0000988!4.62e-13!32;CL:0002032!4.62e-13!32;CL:0000037!4.62e-13!32;CL:0000566!4.62e-13!32;CL:0000837!4.62e-13!32;CL:0002031!6.89e-10!25;CL:0000542!4.84e-08!13;CL:0000051!4.84e-08!13;CL:0000838!8.83e-08!12;CL:0002320!2.91e-07!46;CL:0000134!2.91e-07!46;CL:0000084!3.52e-07!11;CL:0000827!3.52e-07!11;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.61e-13,32;CL:0002032,4.61e-13,32;CL:0000037,4.61e-13,32;CL:0000837,4.61e-13,32;CL:0002031,6.89e-10,25;CL:0000542,4.83e-08,13;CL:0000051,4.83e-08,13;CL:0000838,8.83e-08,12;CL:0002320,2.78e-07,46;CL:0000134,2.78e-07,46;CL:0000084,3.51e-07,11;CL:0000827,3.51e-07,11;CL:0000791,4.73e-07,9;CL:0000789,4.73e-07,9;CL:0002420,4.73e-07,9;CL:0002419,4.73e-07,9;CL:0000790,4.73e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-08!45;UBERON:0003061!3.71e-08!45;UBERON:0001041!1.49e-07!92;UBERON:0004177!2.15e-07!29;UBERON:0002193!2.62e-07!48;UBERON:0002384!2.91e-07!46;UBERON:0000926!3.12e-07!193;UBERON:0004120!3.12e-07!193;UBERON:0006603!3.12e-07!193;UBERON:0003104!4.65e-07!131;UBERON:0009142!4.65e-07!131;UBERON:0000077!5.64e-07!97 | |ontology_enrichment_uberon=UBERON:0002390!3.71e-08!45;UBERON:0003061!3.71e-08!45;UBERON:0001041!1.49e-07!92;UBERON:0004177!2.15e-07!29;UBERON:0002193!2.62e-07!48;UBERON:0002384!2.91e-07!46;UBERON:0000926!3.12e-07!193;UBERON:0004120!3.12e-07!193;UBERON:0006603!3.12e-07!193;UBERON:0003104!4.65e-07!131;UBERON:0009142!4.65e-07!131;UBERON:0000077!5.64e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.45e-08,45;UBERON:0003061,3.45e-08,45;UBERON:0004177,1.98e-07,29;UBERON:0005057,1.98e-07,29;UBERON:0002193,2.45e-07,48;UBERON:0002405,2.45e-07,48;UBERON:0002384,2.78e-07,46 | |||
|phase1_expression=6.24580503708696,4.18770489167233,0.909998478779072,6.0492842261366,11.0197060588196,7.72244650794693,4.67225281191051,34.0885573885761,42.7997715341067,37.6843887378409,44.3454537704058,41.0028897236029,28.5905218985114,26.2261207256992,10.6595123781012,22.4747546802707,10.4934281719222,15.6153771852328,13.0258711925452,13.1560792057389,1.27564935226605,9.13476751048145,8.35839325244593,3.19984845586813,3.44113921600755,4.59385571292016,3.4460959692726,2.15471232685889,3.04037471130198,3.78045194639896,8.86922042621219,92.7144783251062,50.4353125819348,31.6963362030877,19.6419101430867,17.4546377626417,32.054588933192,14.6486070757918,8.5946887897618,19.3703785270305,42.352667138233,16.3930916390027,9.71020706062307,9.56815816614387,7.70464677268311,8.9937908559224,3.9119567217402,1.96222640742402,1.97717564461025,0.972149495371417,2.09979632438044,1.43752564364972,21.4761735753903,15.9579671242496,16.1325023588383,2.31533492432352,8.5960031981627,2.06268836910977,2.22548106945558,2.11596391708813,1.26766280701236,5.08266798103698,2.66788438833342,4.04954872776629,2.96659908770092,2.8419204597844,3.29560121570245,2.30530983192933,3.11068836925433,1.75507719831198,2.3135745748652,2.28520787523043,1.10434270475807,3.55223317723367,3.06705507258356,1.83843757322004,1.10115880999389,1.0214987046815,0.921639199537461,2.37395317914349,2.56165402086747,1.04182674111352,1.3959149950069,2.8138130501584,2.13917546887534,1.17851434189467,2.42031857358475,2.98239113320481,11.8132861599767,17.3058872644539,22.3195656300292,0,7.47968467078526,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,6.81721290312231,8.3131521472918,4.59341446863442,5.35204995151386,2.56652954828636,0,0,9.95858788651585,8.61423542615335,10.1104889002957,1.02765491747154,5.43769555659061,2.22663208597237,12.3174582003956,7.00270600117925,7.61031140944993,4.97384713823654,5.17390311397101,2.51333182659351,2.47194967734374,2.31358971071859,7.07688441559899,5.01477234836968,5.74187947997023,16.0008833534623,1.86391761218122,3.22058876712702,3.97948742945565,6.89734049063197,19.7694955434768,19.196887391789,20.5853767858365,1.49790639404823,1.37250180845588,5.52879149296603,2.43354048269187,2.04572365864264,1.45451631191692,2.92034273521964,6.21220119486929,7.46441823660558,3.28539585963777,1.47309299120532,9.75903322220278,9.65588838620586,5.58192602396583,6.0281927134286,5.17077393550092,7.94305065766069,3.84177070694888,3.88055056108524,5.17363183038821,6.05139456537022,8.2697028357056,5.69908904311695,6.39508673218875,8.70630416305416,9.26019613835746,7.36426787228425,14.0442637462647,12.610047448621,9.66155897945015,3.31401236056803,4.22146907965973,6.30217215113552,2.3674473558521,5.90292695242211,6.32495162838251,4.88321283975857,3.21928081679543,2.80236821681207,4.60767579757745,5.25335885053105,2.99954595319666,3.65499968563331,3.29325172936576,1.20785776884335,2.94405927989778,5.14523061896422,0.991256348951394,3.70230793328962,10.4511242762265,10.9151235774406,6.57224052742676,3.63030344322017,5.11469500843202,4.37518940058886,6.16887780007865,4.6115707322723,6.28338022000674,2.98434708061726,6.23885078781184,2.69645822596266,4.53889904736858,3.58454291857861,4.93136542478012,8.22589290790047,4.50830942692322,8.96065842519383,5.81857461502877,4.06787755363848,3.73095569033118,1.91893192373483,2.35498091762062,3.33172342588861,4.74324203339438,16.3508203601772,16.1178375992826,21.3619006765611,11.9687471619217,13.0235666266305,12.9859184408524,8.34318798607351,7.7824908852017,12.0807021802756,5.75072826109418,4.46569137202204,5.61667811606209,2.52578877947112,3.58794827043824,1.92977408545347,2.03228509183265,7.95863929436036,5.21487924614483,12.0519010900384,9.62230017982859,4.18765643604539,2.85652369063216,4.87834119644497,4.57141917907954,5.97954662051692,4.30527875375215,5.40748938561935,3.7990696010497,2.74833211304872,6.03165135757089,5.4390568381871,6.88469982226651,10.2096596132751,2.24770825982909,1.75817529888305,1.47541450839008,2.01976741763498,4.73262329124385,7.80877488593277,5.60100834105277,4.77937595905104,3.7875774594007,3.39691836946599,4.85772842009873,4.09158201075837,4.34816555741176,2.24924921495265,3.83238230062325,7.12262414669021,5.86393053672874,4.78413356620353,9.2921596837974,15.2951800777638,11.4882951646605,6.78978287121233,9.15435867930396,7.37844355065426,7.75284879504663,8.36127577798263,11.7644134866958,14.8537276229834,8.4334886859999,6.18813259489121,4.76615448055303,5.04171063287669,6.72665155670323,6.43011105094777,4.78818630834139,7.49149033928696,5.43011767986999,4.87143918583359,5.86679270159276,3.60114520468494,3.52845436887939,4.61681508236144,6.45857706783622,9.22787751400785,8.95292580023523,8.37118588699812,8.16146342563582,2.41052892613663,12.3027034174454,10.3193433981611,18.7046472643409,21.6623725555395,17.0867784651281,19.6749228957609,19.0375841593118,19.8731062299594,13.8199973804424,1.90934123603023,9.01557581706236,7.1161813494397,11.4485661271109,10.8725913927524,10.6997656235627,5.79916689454729,5.20716771069616,6.28214260761671,3.36998930558661,0,1.12738587736838,11.3632574993424,9.92750942742586,6.80579159204167,12.3993430538622,8.61676240002969,6.92407708009948,5.85919731797776,5.03324853243412,4.34851417486811,2.59227005632079,4.74016680942267,11.7580624868295,14.6876668745703,10.783428307157,10.3835483487139,8.54329825559439,11.2983722548771,9.30444021199837,11.1063094942962,9.83067805849498,7.56196388526304,6.62713589030316,8.178006539428,6.89573722871257,4.0811469050738,11.0992976687032,19.3781930276468,10.4088462145729,2.51146472241848,3.19060208267009,6.59345847362154,7.71726164684637,3.00943262421218,1.12950368523413,2.30162618253588,1.71868654031819,2.06223818812425,2.05524755931193,3.0215755895588,0,0.900642406448441,1.35942722695261,1.03552062350364,1.45302286617847,9.17757208822371,10.7562171625105,5.83456120963906,2.51535795153579,1.10306105070008,4.22268782823069,3.5025959730612,6.4183841918363,4.04315538822076,4.30914809813408,4.71565853465191,5.61849044819294,5.25006249719928,6.03072424033939,1.90517476513229,3.70829843023538,5.78727661391115,4.53294490883637,3.23837624295674,3.42869252385415,6.03417740941747,5.7224685587357,4.0696996657052,4.89368778159719,5.58456412085065,4.75612729469209,4.47218509444333,5.43216455383447,1.12228454331548,3.44041552560105,4.72821515402705,2.86461730218783,5.42278944150881,5.01557188550968,6.49507502638659,3.74290573512653,3.43793686477277,2.86932498103265,3.97064554415128,3.2461496986859 | |phase1_expression=6.24580503708696,4.18770489167233,0.909998478779072,6.0492842261366,11.0197060588196,7.72244650794693,4.67225281191051,34.0885573885761,42.7997715341067,37.6843887378409,44.3454537704058,41.0028897236029,28.5905218985114,26.2261207256992,10.6595123781012,22.4747546802707,10.4934281719222,15.6153771852328,13.0258711925452,13.1560792057389,1.27564935226605,9.13476751048145,8.35839325244593,3.19984845586813,3.44113921600755,4.59385571292016,3.4460959692726,2.15471232685889,3.04037471130198,3.78045194639896,8.86922042621219,92.7144783251062,50.4353125819348,31.6963362030877,19.6419101430867,17.4546377626417,32.054588933192,14.6486070757918,8.5946887897618,19.3703785270305,42.352667138233,16.3930916390027,9.71020706062307,9.56815816614387,7.70464677268311,8.9937908559224,3.9119567217402,1.96222640742402,1.97717564461025,0.972149495371417,2.09979632438044,1.43752564364972,21.4761735753903,15.9579671242496,16.1325023588383,2.31533492432352,8.5960031981627,2.06268836910977,2.22548106945558,2.11596391708813,1.26766280701236,5.08266798103698,2.66788438833342,4.04954872776629,2.96659908770092,2.8419204597844,3.29560121570245,2.30530983192933,3.11068836925433,1.75507719831198,2.3135745748652,2.28520787523043,1.10434270475807,3.55223317723367,3.06705507258356,1.83843757322004,1.10115880999389,1.0214987046815,0.921639199537461,2.37395317914349,2.56165402086747,1.04182674111352,1.3959149950069,2.8138130501584,2.13917546887534,1.17851434189467,2.42031857358475,2.98239113320481,11.8132861599767,17.3058872644539,22.3195656300292,0,7.47968467078526,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,6.81721290312231,8.3131521472918,4.59341446863442,5.35204995151386,2.56652954828636,0,0,9.95858788651585,8.61423542615335,10.1104889002957,1.02765491747154,5.43769555659061,2.22663208597237,12.3174582003956,7.00270600117925,7.61031140944993,4.97384713823654,5.17390311397101,2.51333182659351,2.47194967734374,2.31358971071859,7.07688441559899,5.01477234836968,5.74187947997023,16.0008833534623,1.86391761218122,3.22058876712702,3.97948742945565,6.89734049063197,19.7694955434768,19.196887391789,20.5853767858365,1.49790639404823,1.37250180845588,5.52879149296603,2.43354048269187,2.04572365864264,1.45451631191692,2.92034273521964,6.21220119486929,7.46441823660558,3.28539585963777,1.47309299120532,9.75903322220278,9.65588838620586,5.58192602396583,6.0281927134286,5.17077393550092,7.94305065766069,3.84177070694888,3.88055056108524,5.17363183038821,6.05139456537022,8.2697028357056,5.69908904311695,6.39508673218875,8.70630416305416,9.26019613835746,7.36426787228425,14.0442637462647,12.610047448621,9.66155897945015,3.31401236056803,4.22146907965973,6.30217215113552,2.3674473558521,5.90292695242211,6.32495162838251,4.88321283975857,3.21928081679543,2.80236821681207,4.60767579757745,5.25335885053105,2.99954595319666,3.65499968563331,3.29325172936576,1.20785776884335,2.94405927989778,5.14523061896422,0.991256348951394,3.70230793328962,10.4511242762265,10.9151235774406,6.57224052742676,3.63030344322017,5.11469500843202,4.37518940058886,6.16887780007865,4.6115707322723,6.28338022000674,2.98434708061726,6.23885078781184,2.69645822596266,4.53889904736858,3.58454291857861,4.93136542478012,8.22589290790047,4.50830942692322,8.96065842519383,5.81857461502877,4.06787755363848,3.73095569033118,1.91893192373483,2.35498091762062,3.33172342588861,4.74324203339438,16.3508203601772,16.1178375992826,21.3619006765611,11.9687471619217,13.0235666266305,12.9859184408524,8.34318798607351,7.7824908852017,12.0807021802756,5.75072826109418,4.46569137202204,5.61667811606209,2.52578877947112,3.58794827043824,1.92977408545347,2.03228509183265,7.95863929436036,5.21487924614483,12.0519010900384,9.62230017982859,4.18765643604539,2.85652369063216,4.87834119644497,4.57141917907954,5.97954662051692,4.30527875375215,5.40748938561935,3.7990696010497,2.74833211304872,6.03165135757089,5.4390568381871,6.88469982226651,10.2096596132751,2.24770825982909,1.75817529888305,1.47541450839008,2.01976741763498,4.73262329124385,7.80877488593277,5.60100834105277,4.77937595905104,3.7875774594007,3.39691836946599,4.85772842009873,4.09158201075837,4.34816555741176,2.24924921495265,3.83238230062325,7.12262414669021,5.86393053672874,4.78413356620353,9.2921596837974,15.2951800777638,11.4882951646605,6.78978287121233,9.15435867930396,7.37844355065426,7.75284879504663,8.36127577798263,11.7644134866958,14.8537276229834,8.4334886859999,6.18813259489121,4.76615448055303,5.04171063287669,6.72665155670323,6.43011105094777,4.78818630834139,7.49149033928696,5.43011767986999,4.87143918583359,5.86679270159276,3.60114520468494,3.52845436887939,4.61681508236144,6.45857706783622,9.22787751400785,8.95292580023523,8.37118588699812,8.16146342563582,2.41052892613663,12.3027034174454,10.3193433981611,18.7046472643409,21.6623725555395,17.0867784651281,19.6749228957609,19.0375841593118,19.8731062299594,13.8199973804424,1.90934123603023,9.01557581706236,7.1161813494397,11.4485661271109,10.8725913927524,10.6997656235627,5.79916689454729,5.20716771069616,6.28214260761671,3.36998930558661,0,1.12738587736838,11.3632574993424,9.92750942742586,6.80579159204167,12.3993430538622,8.61676240002969,6.92407708009948,5.85919731797776,5.03324853243412,4.34851417486811,2.59227005632079,4.74016680942267,11.7580624868295,14.6876668745703,10.783428307157,10.3835483487139,8.54329825559439,11.2983722548771,9.30444021199837,11.1063094942962,9.83067805849498,7.56196388526304,6.62713589030316,8.178006539428,6.89573722871257,4.0811469050738,11.0992976687032,19.3781930276468,10.4088462145729,2.51146472241848,3.19060208267009,6.59345847362154,7.71726164684637,3.00943262421218,1.12950368523413,2.30162618253588,1.71868654031819,2.06223818812425,2.05524755931193,3.0215755895588,0,0.900642406448441,1.35942722695261,1.03552062350364,1.45302286617847,9.17757208822371,10.7562171625105,5.83456120963906,2.51535795153579,1.10306105070008,4.22268782823069,3.5025959730612,6.4183841918363,4.04315538822076,4.30914809813408,4.71565853465191,5.61849044819294,5.25006249719928,6.03072424033939,1.90517476513229,3.70829843023538,5.78727661391115,4.53294490883637,3.23837624295674,3.42869252385415,6.03417740941747,5.7224685587357,4.0696996657052,4.89368778159719,5.58456412085065,4.75612729469209,4.47218509444333,5.43216455383447,1.12228454331548,3.44041552560105,4.72821515402705,2.86461730218783,5.42278944150881,5.01557188550968,6.49507502638659,3.74290573512653,3.43793686477277,2.86932498103265,3.97064554415128,3.2461496986859 | ||
|short_description=p1@Gm12816,p1@LOC674810,p1@Rpl3 | |short_description=p1@Gm12816,p1@LOC674810,p1@Rpl3 | ||
}} | }} |
Revision as of 18:21, 14 November 2012
Short description: | p1@Gm12816, p1@LOC674810, p1@Rpl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm12816_5end, CAGE_peak_1_at_LOC674810_5end, CAGE_peak_1_at_Rpl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1036 |
Association with transcript: | 46bp_to_ENSMUST00000081650, NM_013762, uc007wvb.2_5end |
EntrezGene: | 27367,433745,674810 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.61e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.61e-13 | 32 |
hematopoietic stem cell | 4.61e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.61e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 6.89e-10 | 25 |
lymphocyte | 4.83e-08 | 13 |
common lymphoid progenitor | 4.83e-08 | 13 |
lymphoid lineage restricted progenitor cell | 8.83e-08 | 12 |
connective tissue cell | 2.78e-07 | 46 |
mesenchymal cell | 2.78e-07 | 46 |
T cell | 3.51e-07 | 11 |
pro-T cell | 3.51e-07 | 11 |
mature alpha-beta T cell | 4.73e-07 | 9 |
alpha-beta T cell | 4.73e-07 | 9 |
immature T cell | 4.73e-07 | 9 |
mature T cell | 4.73e-07 | 9 |
immature alpha-beta T cell | 4.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.45e-08 | 45 |
blood island | 3.45e-08 | 45 |
hemopoietic organ | 1.98e-07 | 29 |
immune organ | 1.98e-07 | 29 |
hemolymphoid system | 2.45e-07 | 48 |
immune system | 2.45e-07 | 48 |
connective tissue | 2.78e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.