FFCP PHASE1:Mm9::chr5:52581958..52581967,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=414108|HGNC=|UniProt=|association_with_transcript=38bp_to_ENSMUST00000133755,NR_015537,uc008xki.1,uc008xkj.1,uc008xkk.1_5end|description=CAGE_peak_2_at_9230114K14Rik_5end|id=chr5:52581958..52581967,+|ontology_enrichment_celltype=CL:0000107!5.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.12e-17,9;CL:0000680,1.07e-09,6;CL:0000187,1.07e-09,6;CL:0000056,1.07e-09,6;CL:0000349,1.69e-08,3;CL:0000351,1.69e-08,3;CL:0000222,2.95e-08,7;CL:0000393,7.23e-08,39;CL:0000211,7.23e-08,39;CL:0000192,7.75e-08,3;CL:0000359,7.75e-08,3;CL:0002539,7.75e-08,3;CL:0000514,7.75e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.57e-07!11;UBERON:0002410!5.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.12e-17,9;UBERON:0000010,6.14e-17,11;UBERON:0000947,8.46e-10,4;UBERON:0001637,8.46e-10,4;UBERON:0004573,8.46e-10,4;UBERON:0003509,8.46e-10,4;UBERON:0004571,8.46e-10,4;UBERON:0010191,8.46e-10,4;UBERON:0004572,8.46e-10,4;UBERON:0000013,1.21e-08,3;UBERON:0000358,1.69e-08,3;UBERON:0000307,1.69e-08,3;UBERON:0007010,1.69e-08,3;UBERON:0010313,3.86e-08,3;UBERON:0002342,3.86e-08,3;UBERON:0002005,3.86e-08,3;UBERON:0005428,3.86e-08,3;UBERON:0005062,3.86e-08,3;UBERON:0001135,7.75e-08,3;UBERON:0004237,7.75e-08,3;UBERON:0004695,7.75e-08,3;UBERON:0002111,7.75e-08,3;UBERON:0004178,7.75e-08,3;UBERON:0000055,7.86e-08,5;UBERON:0007500,7.86e-08,5;UBERON:0001981,7.86e-08,5;UBERON:0002049,7.86e-08,5;UBERON:0007798,7.86e-08,5;UBERON:0004537,7.86e-08,5;UBERON:0006965,7.86e-08,5;UBERON:0000014,1.18e-07,5;UBERON:0001003,1.18e-07,5;UBERON:0002097,1.18e-07,5;UBERON:0002199,1.18e-07,5;UBERON:0007029,1.18e-07,5;UBERON:0007376,1.18e-07,5;UBERON:0002416,1.18e-07,5;UBERON:0007383,1.18e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,0.684802919724823,0.524522414513984,0.333109761815663,1.21485160433896,0,0,0.137114433605739,0,0.255129870453209,0.893618560807968,1.04479915655574,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0.837063261473815,0,0,0.588231488031014,0,0,2.64383317748712,2.33166941804883,1.28482726513177,0.782391344348039,0.218025156380447,0,0.777719596297134,0.839918529752175,0,0.167782606057736,0,0.336093799142464,1.02903774414379,0.286533439938757,4.12537673821954,0.202316460859598,0,0,1.35537812827653,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0.372798891650601,0.302904773332736,1.058001841495,0.869593466105033,0.860423876981386,0,0,0,0.896053774194671,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0.649473123033642,0.760079596425296,1.51657333504435,0.22836775943812,0.776813650941515,0,0,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0.494389935468748,1.44599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.811206315338788,0.203678727700633,0,0,1.26265113531884,0.130120442962704,0,0.360124259610698,0,0.476255494059295,0,0.281105173679186,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,0.702213187313235,0.257347907114715,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.985004784474571,0.648550476366846,1.46199987425332,1.3173006917463,0.939444931322602,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.470996183524124,0.740382983530803,0,0.83422552858047,0.393117990226406,0.449724224769707,0.608580364165509,0.482354319504834,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0.757412781613119,3.47059041357882,3.90438744296638,1.50796378412959,2.38968797952552,1.55959071857676,0.566153061577665,4.85772842009873,4.38383786866968,3.95287777946523,0.321321316421807,0.425820255624806,0,0,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0,0,1.26414703174326,0,1.03135543248187,1.02131881726136,0,0,0,0,0.535106452806212,0,0,0.469343416127421,0.42366414172764,0.220528398054962,6.10079135883476,0.968786560175433,1.38719727334758,1.43246812803764,1.14898629821543,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,1.50694765603753,0.956859594047176,0.686334519619568,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0.621339313086926,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0,0,0,0.629156066554265,0.724752362478018,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.228620419965,0.806609481094724,0.487289403698762,0.192423683280659,0.116876902181569,1.13365191807606,2.21985953374065,7.53596395519596,4.02923079273788,1.15913756419314,0.187682475451182,0,0.857473516316263,0,1.6942555278512,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.543216455383447,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p2@9230114K14Rik}} | ||
|EntrezGene=414108 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENSMUST00000133755,NR_015537,uc008xki.1,uc008xkj.1,uc008xkk.1_5end | |||
|description=CAGE_peak_2_at_9230114K14Rik_5end | |||
|id=chr5:52581958..52581967,+ | |||
|ontology_enrichment_celltype=CL:0000107!5.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.12e-17,9;CL:0000680,1.07e-09,6;CL:0000187,1.07e-09,6;CL:0000056,1.07e-09,6;CL:0000349,1.69e-08,3;CL:0000351,1.69e-08,3;CL:0000222,2.95e-08,7;CL:0000393,7.23e-08,39;CL:0000211,7.23e-08,39;CL:0000192,7.75e-08,3;CL:0000359,7.75e-08,3;CL:0002539,7.75e-08,3;CL:0000514,7.75e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.57e-07!11;UBERON:0002410!5.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.12e-17,9;UBERON:0000010,6.14e-17,11;UBERON:0000947,8.46e-10,4;UBERON:0001637,8.46e-10,4;UBERON:0004573,8.46e-10,4;UBERON:0003509,8.46e-10,4;UBERON:0004571,8.46e-10,4;UBERON:0010191,8.46e-10,4;UBERON:0004572,8.46e-10,4;UBERON:0000013,1.21e-08,3;UBERON:0000358,1.69e-08,3;UBERON:0000307,1.69e-08,3;UBERON:0007010,1.69e-08,3;UBERON:0010313,3.86e-08,3;UBERON:0002342,3.86e-08,3;UBERON:0002005,3.86e-08,3;UBERON:0005428,3.86e-08,3;UBERON:0005062,3.86e-08,3;UBERON:0001135,7.75e-08,3;UBERON:0004237,7.75e-08,3;UBERON:0004695,7.75e-08,3;UBERON:0002111,7.75e-08,3;UBERON:0004178,7.75e-08,3;UBERON:0000055,7.86e-08,5;UBERON:0007500,7.86e-08,5;UBERON:0001981,7.86e-08,5;UBERON:0002049,7.86e-08,5;UBERON:0007798,7.86e-08,5;UBERON:0004537,7.86e-08,5;UBERON:0006965,7.86e-08,5;UBERON:0000014,1.18e-07,5;UBERON:0001003,1.18e-07,5;UBERON:0002097,1.18e-07,5;UBERON:0002199,1.18e-07,5;UBERON:0007029,1.18e-07,5;UBERON:0007376,1.18e-07,5;UBERON:0002416,1.18e-07,5;UBERON:0007383,1.18e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,0.684802919724823,0.524522414513984,0.333109761815663,1.21485160433896,0,0,0.137114433605739,0,0.255129870453209,0.893618560807968,1.04479915655574,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0.837063261473815,0,0,0.588231488031014,0,0,2.64383317748712,2.33166941804883,1.28482726513177,0.782391344348039,0.218025156380447,0,0.777719596297134,0.839918529752175,0,0.167782606057736,0,0.336093799142464,1.02903774414379,0.286533439938757,4.12537673821954,0.202316460859598,0,0,1.35537812827653,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0.372798891650601,0.302904773332736,1.058001841495,0.869593466105033,0.860423876981386,0,0,0,0.896053774194671,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0.649473123033642,0.760079596425296,1.51657333504435,0.22836775943812,0.776813650941515,0,0,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0.494389935468748,1.44599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.811206315338788,0.203678727700633,0,0,1.26265113531884,0.130120442962704,0,0.360124259610698,0,0.476255494059295,0,0.281105173679186,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,0.702213187313235,0.257347907114715,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.985004784474571,0.648550476366846,1.46199987425332,1.3173006917463,0.939444931322602,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.470996183524124,0.740382983530803,0,0.83422552858047,0.393117990226406,0.449724224769707,0.608580364165509,0.482354319504834,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0.757412781613119,3.47059041357882,3.90438744296638,1.50796378412959,2.38968797952552,1.55959071857676,0.566153061577665,4.85772842009873,4.38383786866968,3.95287777946523,0.321321316421807,0.425820255624806,0,0,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0,0,1.26414703174326,0,1.03135543248187,1.02131881726136,0,0,0,0,0.535106452806212,0,0,0.469343416127421,0.42366414172764,0.220528398054962,6.10079135883476,0.968786560175433,1.38719727334758,1.43246812803764,1.14898629821543,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,1.50694765603753,0.956859594047176,0.686334519619568,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0.621339313086926,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0,0,0,0.629156066554265,0.724752362478018,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.228620419965,0.806609481094724,0.487289403698762,0.192423683280659,0.116876902181569,1.13365191807606,2.21985953374065,7.53596395519596,4.02923079273788,1.15913756419314,0.187682475451182,0,0.857473516316263,0,1.6942555278512,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.543216455383447,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@9230114K14Rik | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p2@9230114K14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_9230114K14Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENSMUST00000133755, NR_015537, uc008xki.1, uc008xkj.1, uc008xkk.1_5end |
EntrezGene: | 9230114K14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.12e-17 | 9 |
muscle precursor cell | 1.07e-09 | 6 |
muscle cell | 1.07e-09 | 6 |
myoblast | 1.07e-09 | 6 |
extraembryonic cell | 1.69e-08 | 3 |
trophoblast cell | 1.69e-08 | 3 |
mesodermal cell | 2.95e-08 | 7 |
electrically responsive cell | 7.23e-08 | 39 |
electrically active cell | 7.23e-08 | 39 |
smooth muscle cell | 7.75e-08 | 3 |
vascular associated smooth muscle cell | 7.75e-08 | 3 |
aortic smooth muscle cell | 7.75e-08 | 3 |
smooth muscle myoblast | 7.75e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.