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FFCP PHASE1:Mm9::chr17:34740467..34740571,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54197|HGNC=|UniProt=O35445|association_with_transcript=0bp_to_NM_019403,uc008ccy.1_5end|description=CAGE_peak_1_at_Rnf5_5end|id=chr17:34740467..34740571,-|ontology_enrichment_celltype=CL:0000117!2.66e-08!23;CL:0000337!2.66e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-08,23;CL:0000337,2.66e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.86e-14!43;UBERON:0005409!1.68e-10!59;UBERON:0000481!7.72e-10!230;UBERON:0000344!6.72e-09!15;UBERON:0001242!1.17e-07!13;UBERON:0000060!1.17e-07!13;UBERON:0001262!1.17e-07!13;UBERON:0004786!1.17e-07!13;UBERON:0000073!4.45e-07!75;UBERON:0001016!4.45e-07!75;UBERON:0000033!4.55e-07!63;UBERON:0001049!4.97e-07!52;UBERON:0005068!4.97e-07!52;UBERON:0006241!4.97e-07!52;UBERON:0007135!4.97e-07!52;UBERON:0000480!5.15e-07!308;UBERON:0000467!5.15e-07!308;UBERON:0001017!6.39e-07!73;UBERON:0005743!6.39e-07!73;UBERON:0002346!7.94e-07!71;UBERON:0003075!7.94e-07!71;UBERON:0007284!7.94e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.25e-11,31;UBERON:0000344,6.72e-09,15;UBERON:0011216,1.96e-08,194;UBERON:0005409,1.11e-07,47;UBERON:0001242,1.17e-07,13;UBERON:0001262,1.17e-07,13;UBERON:0004786,1.17e-07,13;UBERON:0000073,4.27e-07,54;UBERON:0001016,4.45e-07,75;UBERON:0001049,4.97e-07,52;UBERON:0005068,4.97e-07,52;UBERON:0006241,4.97e-07,52;UBERON:0007135,4.97e-07,52;UBERON:0001017,6.39e-07,73|phase1_expression=44.2010818009231,120.04754022794,118.754801480669,71.0790896571051,66.1182363529178,68.494742940051,67.2804404915114,27.7615145399389,2.67498572088167,4.44722600011788,5.65019295144166,6.70086135560826,16.606470803327,20.9808965805594,10.3264026162855,13.5658429151183,11.1929900500503,11.5143690355757,9.87223921961319,8.48779303596061,23.216818211242,22.0425911665965,21.9407822876706,80.3161962422901,83.5049783084499,117.143320679464,108.121261035928,125.835199888559,91.5912881779722,98.7958108658928,95.344119581781,10.7955214488137,11.0711661765223,15.8481681015439,35.817600849158,37.5690298510193,30.421234083093,74.4986302711696,58.600150839285,59.1581830690392,63.5290007073495,62.840184616177,86.9063531925765,16.8701736087274,15.4092935453662,26.0636388069588,35.2076104956618,35.5381004900128,32.9529274101708,35.3862416315196,19.5980990275508,35.9381410912429,11.7447824240415,19.5847778343063,11.7632829699862,8.2323019531503,7.73640287834643,13.9231464914909,61.0995711795985,50.2541430308431,38.6637156138769,21.6860500524245,16.8966011261116,56.6936821887281,58.3431153914515,64.6536904600951,66.5112245350858,99.5125410782826,46.5566359265065,48.0621140460819,50.0573408016289,51.4171771926846,39.3146002893872,51.2011540718508,68.7212027200755,38.6071890376209,28.6301290598411,34.0925192687451,29.646060918455,60.1401472049684,74.379454248759,66.1559980607085,37.1313388671837,42.7699583624077,36.977175961988,35.0608016713665,35.8776635613739,45.8542636730239,23.6265723199534,39.1460681353149,6.95674772884027,43.8816177260507,30.5987100168488,80.9554787456726,41.5856907166508,45.6987424839282,38.9031043764953,18.9177658061644,17.9252343175979,19.4336765980687,56.0556810711188,12.8326477414318,22.9324715735981,0,22.0820861831438,24.8292668165597,18.1988800205322,47.2721262036908,7.76813650941515,27.3133535879278,28.104622936114,29.8376168745898,25.1370892009104,32.1039224377086,25.3991607413122,29.2803157798144,12.8541383221874,24.4372913194651,17.6922110389975,10.676612096529,13.0296495891632,16.4857586065976,48.4618579167118,24.0080253549469,33.0925796765259,57.9887515323502,7.90779821739074,11.9980546198682,9.53026703047985,33.1037313084658,32.4825428001225,45.9894928733084,29.7239587528793,35.5444485689159,33.2460871295296,32.4482526135515,14.155671575194,16.1729061793121,20.4705434331277,43.3510223126136,29.0168587806829,40.2328682758578,28.0896922496345,28.6339153887859,22.4520447199382,28.5693596235215,30.7341656555911,26.1290404446406,22.8502072508813,18.7215019366141,17.067259043903,17.7548543266336,15.8486932058591,15.3230953269753,14.610531684964,16.5198441459349,9.12877143507205,11.5806558201622,9.37739548005456,24.0265896141182,34.0062786972589,30.2504263254505,18.7028341112316,26.7599355176469,23.9114024975436,26.9739375910473,20.9253253091703,21.368057653192,18.9243827400503,21.5059377943615,19.3754454814595,21.0527981892479,15.8076083009556,15.2995317386824,33.8566817188245,43.0141279745409,68.72710686063,50.510058232737,24.9547253126224,20.4368271237186,19.5878541209582,33.8828321367215,32.0224383136613,37.8548995963993,59.3161326930639,37.7160606317985,46.4970136280499,43.3725109049709,42.5021709919682,56.625622745216,59.8702398152903,58.547534336784,29.2088567467746,26.2771579002376,18.0332377076929,22.4016460629846,37.4328300233518,28.8258219749209,33.9580204357262,49.3017894251871,53.6935649217502,54.418149289514,77.670588296833,23.6920050116854,21.0318124771127,29.0072124976461,26.9803961446709,32.8000937263287,41.5040138403714,35.6743210439005,31.940639674682,37.88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|EntrezGene=54197
|HGNC=
|UniProt=O35445
|association_with_transcript=0bp_to_NM_019403,uc008ccy.1_5end
|description=CAGE_peak_1_at_Rnf5_5end
|id=chr17:34740467..34740571,-
|ontology_enrichment_celltype=CL:0000117!2.66e-08!23;CL:0000337!2.66e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-08,23;CL:0000337,2.66e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!7.86e-14!43;UBERON:0005409!1.68e-10!59;UBERON:0000481!7.72e-10!230;UBERON:0000344!6.72e-09!15;UBERON:0001242!1.17e-07!13;UBERON:0000060!1.17e-07!13;UBERON:0001262!1.17e-07!13;UBERON:0004786!1.17e-07!13;UBERON:0000073!4.45e-07!75;UBERON:0001016!4.45e-07!75;UBERON:0000033!4.55e-07!63;UBERON:0001049!4.97e-07!52;UBERON:0005068!4.97e-07!52;UBERON:0006241!4.97e-07!52;UBERON:0007135!4.97e-07!52;UBERON:0000480!5.15e-07!308;UBERON:0000467!5.15e-07!308;UBERON:0001017!6.39e-07!73;UBERON:0005743!6.39e-07!73;UBERON:0002346!7.94e-07!71;UBERON:0003075!7.94e-07!71;UBERON:0007284!7.94e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.25e-11,31;UBERON:0000344,6.72e-09,15;UBERON:0011216,1.96e-08,194;UBERON:0005409,1.11e-07,47;UBERON:0001242,1.17e-07,13;UBERON:0001262,1.17e-07,13;UBERON:0004786,1.17e-07,13;UBERON:0000073,4.27e-07,54;UBERON:0001016,4.45e-07,75;UBERON:0001049,4.97e-07,52;UBERON:0005068,4.97e-07,52;UBERON:0006241,4.97e-07,52;UBERON:0007135,4.97e-07,52;UBERON:0001017,6.39e-07,73
|phase1_expression=44.2010818009231,120.04754022794,118.754801480669,71.0790896571051,66.1182363529178,68.494742940051,67.2804404915114,27.7615145399389,2.67498572088167,4.44722600011788,5.65019295144166,6.70086135560826,16.606470803327,20.9808965805594,10.3264026162855,13.5658429151183,11.1929900500503,11.5143690355757,9.87223921961319,8.48779303596061,23.216818211242,22.0425911665965,21.9407822876706,80.3161962422901,83.5049783084499,117.143320679464,108.121261035928,125.835199888559,91.5912881779722,98.7958108658928,95.344119581781,10.7955214488137,11.0711661765223,15.8481681015439,35.817600849158,37.5690298510193,30.421234083093,74.4986302711696,58.600150839285,59.1581830690392,63.5290007073495,62.840184616177,86.9063531925765,16.8701736087274,15.4092935453662,26.0636388069588,35.2076104956618,35.5381004900128,32.9529274101708,35.3862416315196,19.5980990275508,35.9381410912429,11.7447824240415,19.5847778343063,11.7632829699862,8.2323019531503,7.73640287834643,13.9231464914909,61.0995711795985,50.2541430308431,38.6637156138769,21.6860500524245,16.8966011261116,56.6936821887281,58.3431153914515,64.6536904600951,66.5112245350858,99.5125410782826,46.5566359265065,48.0621140460819,50.0573408016289,51.4171771926846,39.3146002893872,51.2011540718508,68.7212027200755,38.6071890376209,28.6301290598411,34.0925192687451,29.646060918455,60.1401472049684,74.379454248759,66.1559980607085,37.1313388671837,42.7699583624077,36.977175961988,35.0608016713665,35.8776635613739,45.8542636730239,23.6265723199534,39.1460681353149,6.95674772884027,43.8816177260507,30.5987100168488,80.9554787456726,41.5856907166508,45.6987424839282,38.9031043764953,18.9177658061644,17.9252343175979,19.4336765980687,56.0556810711188,12.8326477414318,22.9324715735981,0,22.0820861831438,24.8292668165597,18.1988800205322,47.2721262036908,7.76813650941515,27.3133535879278,28.104622936114,29.8376168745898,25.1370892009104,32.1039224377086,25.3991607413122,29.2803157798144,12.8541383221874,24.4372913194651,17.6922110389975,10.676612096529,13.0296495891632,16.4857586065976,48.4618579167118,24.0080253549469,33.0925796765259,57.9887515323502,7.90779821739074,11.9980546198682,9.53026703047985,33.1037313084658,32.4825428001225,45.9894928733084,29.7239587528793,35.5444485689159,33.2460871295296,32.4482526135515,14.155671575194,16.1729061793121,20.4705434331277,43.3510223126136,29.0168587806829,40.2328682758578,28.0896922496345,28.6339153887859,22.4520447199382,28.5693596235215,30.7341656555911,26.1290404446406,22.8502072508813,18.7215019366141,17.067259043903,17.7548543266336,15.8486932058591,15.3230953269753,14.610531684964,16.5198441459349,9.12877143507205,11.5806558201622,9.37739548005456,24.0265896141182,34.0062786972589,30.2504263254505,18.7028341112316,26.7599355176469,23.9114024975436,26.9739375910473,20.9253253091703,21.368057653192,18.9243827400503,21.5059377943615,19.3754454814595,21.0527981892479,15.8076083009556,15.2995317386824,33.8566817188245,43.0141279745409,68.72710686063,50.510058232737,24.9547253126224,20.4368271237186,19.5878541209582,33.8828321367215,32.0224383136613,37.8548995963993,59.3161326930639,37.7160606317985,46.4970136280499,43.3725109049709,42.5021709919682,56.625622745216,59.8702398152903,58.547534336784,29.2088567467746,26.2771579002376,18.0332377076929,22.4016460629846,37.4328300233518,28.8258219749209,33.9580204357262,49.3017894251871,53.6935649217502,54.418149289514,77.670588296833,23.6920050116854,21.0318124771127,29.0072124976461,26.9803961446709,32.8000937263287,41.5040138403714,35.6743210439005,31.940639674682,37.8894750199552,37.3797336971122,29.0269939181433,33.388031023258,44.9590402745859,55.254403364749,79.6031810249556,16.812540305161,24.633883530163,14.1779529504563,19.0114496068211,21.8261930908307,21.2732946951106,17.139142143793,21.2695676165001,10.4039195110086,12.6234873099802,14.3509291791738,20.4829143394672,20.2041428783098,18.370430439852,36.1899081454253,25.0196614556606,58.5199484892653,47.1851836181093,30.9862638676438,38.093798142466,11.9672510124973,10.856249869788,15.7754109708128,16.0079885161622,19.6035291936847,20.5513166239195,19.8290819933331,14.4369030702305,22.6693992937941,24.2572362066389,20.1596766752727,34.7027021735552,15.0456490320765,23.1485284767432,14.1711654637611,14.0224604526655,49.1157011857862,26.220308704738,28.1160907977218,47.9056902579981,47.5436047538044,37.8145231971031,25.5844010236539,33.081569382453,34.9367430817027,46.457403416565,83.280700774249,72.1948802737308,30.2991249120871,26.8291030106652,40.2305506564366,28.5068256592018,29.9704994855442,17.8368817602071,22.2141177812863,25.2705907765117,13.8456307757589,11.2270997557825,29.9918621354748,17.3130565588554,10.8181165886257,13.148217634338,16.8315005044422,14.2802582778203,50.4261847369642,35.9725085900389,21.0171183381359,20.8450736642855,20.0010089559289,22.6042148405629,21.597687979922,20.3612574153805,4.75939603982795,6.29781535456461,6.90999869022119,31.5041303944987,20.8781755763549,18.0954325742895,27.0013352054503,24.4633306336928,35.593097890627,25.4893614667311,20.8286708427847,31.9342249220516,35.9033476018266,44.1150912291717,5.6369293868419,24.6702300972565,26.3078999826785,17.6950581393083,20.1489324625261,24.3296820706721,15.725869978531,17.8380007236212,11.7442465756796,11.5960377996483,10.0810502190253,23.068811805857,19.2588954525656,25.2668954625475,20.7873316764472,21.3041767844303,23.0470371546267,21.3947900145545,21.7103604946629,20.496189339474,18.89928805044,22.4842392855154,21.8305652857045,24.7264433015647,19.6353195665036,12.2434407152214,9.10142408833665,13.9056477744687,9.06576928366024,22.0236137196697,24.9617692350072,17.3994043053902,14.1483130192183,38.1194799066876,31.0613513439387,25.7782132444019,27.498984645091,38.8388192096734,21.2375581128899,21.1510291269116,20.925697507186,23.4167025676595,19.938265995305,18.1216109113137,33.8346753124416,20.7492934168536,27.1466433149073,23.3382448385562,28.2977769547776,20.4066294379516,19.3354653187405,18.3371200942616,19.2551525755089,22.2373546352142,21.0387818908899,26.2190614526646,27.905169226025,25.4179855047331,25.3864772783811,19.528041342606,22.9450965370814,22.5703787942535,16.4834360321323,13.3951017322302,21.9436321526666,20.0547660960051,25.274236134416,20.2031519118937,13.6458601602229,20.8998081492441,24.3294203920788,17.3626009548976,20.2348129630334,13.4674145197857,16.9648075917569,24.5276161115153,18.415396942636,19.8319156718036,20.8339139859633,25.9803001055464,26.2003401458857,21.0573632967332,11.0947232599929,18.5296792060393,16.9263520002908
|short_description=p1@Rnf5
}}

Revision as of 14:15, 13 September 2013

Short description:p1@Rnf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_019403, uc008ccy.1_5end
EntrezGene:Rnf5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G744.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5120.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6118.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I371.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I466.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I768.49
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I867.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.94
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D180.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D283.50
GP2+ M cell, pool1.CNhs13228.11845-124H9117.14
GP2+ M cell, pool2.CNhs13231.11846-124I1108.12
GP2+ M cell, pool3.CNhs13240.11847-124I2125.84
Ileum epithelium, pool1.CNhs13199.10252-104B991.59
Ileum epithelium, pool2.CNhs13232.10253-104C198.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C895.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F535.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G874.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H158.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H359.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G963.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H262.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H486.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B735.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C235.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C435.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C361.10
Mouse Granule cells, donor2.CNhs12357.11731-123E350.25
Mouse Granule cells, donor3.CNhs12108.11636-122C738.66
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C756.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E758.34
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D264.65
Mouse Microglia, donor1.CNhs12629.11718-123C866.51
Mouse Microglia, donor2.CNhs12634.11736-123E899.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D546.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D251.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F268.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F474.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D866.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.85
Mouse Schwann, donor1.CNhs12507.11728-123D923.63
Mouse Schwann, donor2.CNhs12573.11746-123F939.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C430.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C880.96
Mouse hepatocyte, donor6.CNhs13090.11822-124F441.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.70
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G656.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.27
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D727.31
adrenal gland, embryo E14.CNhs11038.406-44C528.10
adrenal gland, embryo E16.CNhs11004.1254-43D629.84
adrenal gland, embryo E17.CNhs11043.1263-45I125.14
adrenal gland, embryo E18.CNhs11026.1262-18F532.10
adrenal gland, neonate N00.CNhs11191.1311-23C125.40
adrenal gland, neonate N25.CNhs11223.1377-27I329.28
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H124.44
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I233.09
colon, adult.CNhs10468.36-18H757.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A433.10
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F145.99
cortex, adult.CNhs10473.12-14D529.72
cortex, neonate N30.CNhs11107.1392-42F235.54
diencephalon, adult.CNhs10482.20-12F233.25
diencephalon, neonate N30.CNhs11201.1388-42B232.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.17
epididymis, adult.CNhs10490.58-23B220.47
eyeball, adult.CNhs10484.31-12G443.35
eyeball, embryo E12.CNhs11016.345-16C629.02
eyeball, embryo E14.CNhs10521.399-16E240.23
eyeball, embryo E15.CNhs10593.426-16C928.09
eyeball, embryo E17.CNhs11023.1261-18D428.63
eyeball, neonate N00.CNhs11207.633-15C622.45
eyeball, neonate N01.CNhs11140.1532-43E728.57
eyeball, neonate N02.CNhs11205.1551-44G830.73
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E222.85
forelimb, embryo E12.CNhs10600.359-14H218.72
forelimb, embryo E13.CNhs10589.384-1E217.07
forelimb, embryo E14.CNhs10577.413-26A817.75
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I616.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.38
heart, embryo E11.CNhs10586.331-24E924.03
heart, embryo E12.CNhs11015.353-12F534.01
heart, embryo E13.CNhs11013.376-3I930.25
heart, embryo E14.CNhs10597.403-26D418.70
heart, embryo E15.CNhs11017.431-16C826.76
heart, embryo E16.CNhs11021.457-17C623.91
heart, embryo E17.CNhs11025.479-18E526.97
heart, embryo E18.CNhs11030.1283-20G320.93
heart, neonate N00.CNhs11213.639-21E321.37
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G121.51
heart, neonate N16.CNhs11209.782-15G119.38
heart, neonate N20.CNhs11127.821-26I621.05
heart, neonate N25.CNhs11196.1351-25D315.81
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E833.86
hippocampus, neonate N00.CNhs11228.627-43G143.01
intestinal mucosa, adult.CNhs10506.860-29I368.73
intestine, adult.CNhs10496.178-9A350.51
intestine, embryo E12.CNhs11019.1251-16I524.95
intestine, embryo E13.CNhs11010.381-16D520.44
intestine, embryo E15.CNhs10602.976-16D819.59
intestine, embryo E16.CNhs10585.463-22H433.88
intestine, embryo E17.CNhs10582.482-18D332.02
intestine, embryo E18.CNhs10526.1289-20F737.85
intestine, neonate N00.CNhs11126.644-26D159.32
intestine, neonate N01.CNhs11192.1322-23E937.72
intestine, neonate N06.CNhs11102.688-20B846.50
intestine, neonate N07.CNhs11095.720-20F243.37
intestine, neonate N10.CNhs11098.755-23A542.50
intestine, neonate N20.CNhs11187.827-18D156.63
intestine, neonate N25.CNhs11121.1352-25E359.87
intestine, neonate N30.CNhs11131.1384-42G158.55
kidney, embryo E14.CNhs10606.411-4I929.21
kidney, embryo E15.CNhs10997.434-16F826.28
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I222.40
kidney, embryo E18.CNhs11001.1288-20C737.43
kidney, neonate N00.CNhs11214.646-21G728.83
kidney, neonate N10.CNhs11206.758-6D533.96
kidney, neonate N20.CNhs11113.832-19I149.30
kidney, neonate N25.CNhs11122.1353-25F353.69
kidney, neonate N30.CNhs11203.1385-42H154.42
liver, adult pregnant day01.CNhs10466.508-5B277.67
liver, embryo E12.CNhs10601.355-15F823.69
liver, embryo E13.CNhs10524.378-3H621.03
liver, embryo E14.CNhs10594.409-16E129.01
liver, embryo E15.CNhs10520.433-16D726.98
liver, embryo E16.CNhs10523.462-17F532.80
liver, embryo E17.CNhs10510.481-18A341.50
liver, embryo E18.CNhs10579.499-43G435.67
liver, neonate N00.CNhs11117.641-24F431.94
liver, neonate N03.CNhs11123.1345-25G237.89
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H229.03
liver, neonate N10.CNhs11115.751-24B933.39
liver, neonate N20.CNhs11220.823-25A344.96
liver, neonate N25.CNhs11198.1368-26H155.25
liver, neonate N30.CNhs11106.1382-42D179.60
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G224.63
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B621.83
lung, embryo E17.CNhs10605.480-44A621.27
lung, embryo E18.CNhs10583.1287-20I617.14
lung, neonate N00.CNhs11224.640-42C621.27
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E614.35
lung, neonate N20.CNhs11109.822-18A420.48
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H218.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.02
mammary gland, adult lactating day02.CNhs10480.595-22B658.52
mammary gland, adult pregnant day19.CNhs10476.588-5H247.19
medulla oblongata, adult.CNhs10477.17-12C230.99
medulla oblongata, neonate N30.CNhs11200.1396-42A338.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I934.70
ovary, adult.CNhs10507.91-2I715.05
ovary, embryo E18.CNhs11040.505-44H723.15
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G614.02
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F228.12
pancreas, embryo E16.CNhs11003.460-26E547.91
pancreas, embryo E17.CNhs10599.1558-45G347.54
pancreas, embryo E18.CNhs10580.1535-43I737.81
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D733.08
pancreas, neonate N02.CNhs11139.1539-43D834.94
pancreas, neonate N16.CNhs11136.787-43B646.46
pancreas, neonate N25.CNhs11094.1555-45E283.28
pancreas, neonate N30.CNhs11182.1548-44H572.19
pituitary gland, adult.CNhs10493.21-1G830.30
pituitary gland, embryo E12.CNhs11018.346-16E626.83
pituitary gland, embryo E13.CNhs11009.370-44C740.23
pituitary gland, embryo E14.CNhs11037.398-44A528.51
pituitary gland, embryo E15.CNhs10592.427-16B929.97
pituitary gland, embryo E16.CNhs11036.449-43F617.84
pituitary gland, embryo E17.CNhs11039.1265-44F522.21
pituitary gland, neonate N00.CNhs11190.1308-22E925.27
placenta, adult pregnant day10.CNhs10472.539-13I713.85
placenta, adult pregnant day17.CNhs10464.577-18G311.23
prostate, adult.CNhs10470.859-1F829.99
skin, adult.CNhs10492.30-1C317.31
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H313.15
skin, neonate N06.CNhs11097.693-20I516.83
skin, neonate N10.CNhs11108.762-6C414.28
small intestine, neonate N16.CNhs11114.790-21I150.43
spinal cord, adult.CNhs10505.24-13C935.97
spleen, adult.CNhs10465.25-2G221.02
spleen, embryo E16.CNhs11035.461-43C120.85
spleen, embryo E18.CNhs11011.1271-21F220.00
spleen, neonate N10.CNhs11116.752-24D122.60
spleen, neonate N20.CNhs11112.824-19H121.60
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H631.50
stomach, embryo E12.CNhs10588.356-43E320.88
stomach, embryo E15.CNhs10603.1252-16G818.10
stomach, embryo E16.CNhs11022.459-17D427.00
stomach, embryo E17.CNhs11006.1035-18D524.46
stomach, embryo E18.CNhs10999.1286-20C635.59
stomach, neonate N03.CNhs11193.1340-24B825.49
stomach, neonate N07.CNhs11210.718-18A920.83
stomach, neonate N25.CNhs11104.1355-25E431.93
stomach, neonate N30.CNhs11134.1386-42I135.90
submandibular gland, adult.CNhs10469.59-29C144.12
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F524.67
testis, embryo E15.CNhs11034.443-27C526.31
testis, embryo E16.CNhs11033.470-26G517.70
testis, embryo E17.CNhs11029.486-18I520.15
testis, embryo E18.CNhs11027.503-18G524.33
testis, neonate N00.CNhs11189.1300-22B715.73
testis, neonate N07.CNhs11222.726-26I417.84
testis, neonate N10.CNhs11204.763-44D911.74
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B523.07
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I225.27
thymus, embryo E16.CNhs11002.456-26C520.79
thymus, embryo E17.CNhs10581.478-18C121.30
thymus, embryo E18.CNhs10595.1273-19G423.05
thymus, neonate N02.CNhs11181.1541-43F821.39
thymus, neonate N03.CNhs11137.2104-43C721.71
thymus, neonate N06.CNhs11197.681-26C420.50
thymus, neonate N07.CNhs11211.713-19D318.90
thymus, neonate N10.CNhs11194.748-24E422.48
thymus, neonate N20.CNhs11186.820-7A221.83
thymus, neonate N25.CNhs11125.1362-25G724.73
thymus, neonate N30.CNhs11132.1393-42G219.64
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.07
urinary bladder, adult.CNhs10481.879-12E422.02
uterus, adult pregnant day19.CNhs10497.590-15F524.96
uterus, adult.CNhs10509.92-27E517.40
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F838.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I833.83
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H227.15
whole body, embryo E14.5.CNhs10578.420-27D223.34
whole body, embryo E14.CNhs10519.395-14B128.30
whole body, embryo E16.CNhs10514.453-14F220.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.83
whole body, embryo E17.5.CNhs10513.490-9F920.83
whole body, embryo E17.CNhs10517.475-3I525.98
whole body, embryo E18.CNhs10516.493-3B326.20
whole body, neonate N00.CNhs10525.657-19C221.06
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D118.53
whole body, neonate N10.CNhs10518.761-6B416.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.66e-0823
neuroblast (sensu Vertebrata)2.66e-0823

Uber anatomy
Ontology termp-valuen
intestine5.25e-1131
mucosa6.72e-0915
organ system subdivision1.96e-08194
gastrointestinal system1.11e-0747
intestinal mucosa1.17e-0713
wall of intestine1.17e-0713
gastrointestinal system mucosa1.17e-0713
regional part of nervous system4.27e-0754
nervous system4.45e-0775
neural tube4.97e-0752
neural rod4.97e-0752
future spinal cord4.97e-0752
neural keel4.97e-0752
central nervous system6.39e-0773







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