FFCP PHASE1:Mm9::chr1:69730865..69730887,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=928|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:69730865..69730887,-|id=chr1:69730865..69730887,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.04e-10!29;UBERON:0003408!9.44e-10!24;UBERON:0006562!1.37e-09!24;UBERON:0001557!1.37e-09!24;UBERON:0001042!1.37e-09!24;UBERON:0008814!1.37e-09!24;UBERON:0009145!1.37e-09!24;UBERON:0002370!4.87e-09!23;UBERON:0000974!4.87e-09!23;UBERON:0004807!4.87e-09!23;UBERON:0005058!4.87e-09!23;UBERON:0003351!4.87e-09!23;UBERON:0009113!4.87e-09!23;UBERON:0003295!4.87e-09!23;UBERON:0009722!4.87e-09!23;UBERON:0005562!4.87e-09!23;UBERON:0007690!4.87e-09!23;UBERON:0000072!5.50e-09!27;UBERON:0005057!1.64e-07!51;UBERON:0001004!4.62e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.38e-24,23;UBERON:0000974,3.38e-24,23;UBERON:0004807,3.38e-24,23;UBERON:0005058,3.38e-24,23;UBERON:0003351,3.38e-24,23;UBERON:0009113,3.38e-24,23;UBERON:0003295,3.38e-24,23;UBERON:0009722,3.38e-24,23;UBERON:0005562,3.38e-24,23;UBERON:0007690,3.38e-24,23;UBERON:0006562,4.39e-23,24;UBERON:0003408,4.39e-23,24;UBERON:0001557,4.39e-23,24;UBERON:0001042,4.39e-23,24;UBERON:0008814,4.39e-23,24;UBERON:0009145,4.39e-23,24;UBERON:0000072,3.07e-20,27;UBERON:0004177,1.14e-18,29;UBERON:0005057,1.14e-18,29;UBERON:0000077,1.64e-17,35;UBERON:0007811,7.63e-17,36;UBERON:0002193,7.32e-14,48;UBERON:0002405,7.32e-14,48;UBERON:0000153,1.18e-13,43;UBERON:0002390,5.12e-13,45;UBERON:0003061,5.12e-13,45;UBERON:0000065,1.84e-12,41;UBERON:0001004,4.19e-12,42;UBERON:0003929,1.20e-08,55;UBERON:0002368,1.02e-07,60;UBERON:0002530,6.22e-07,65;UBERON:0000490,8.64e-07,66|phase1_expression=0,0,0,0,0,0,0,7.618276083053,0.422366166455,0,0,0,0,0,0,0,0,0,0.411343300817216,0,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,1.03575153458869,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,1.27070227073065,0.149790639404823,0,1.00523481690292,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,1.80143534980301,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.763877555344259,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0687439117814,0.161464426695906,0.120625849856312,0.238744688006273,1.96969079694074,0,0,0.170870880797853,0,0.740778109478847,0.188368457004691,0.136694227721025,0,0.509935289981566,0.979660166265606,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.16011120628178,0.810900861160657,1.1298205288131,2.98817892848929,2.32734704367726,4.56967115996909,2.88469078847925,3.10148007066612,3.12995994839258,3.96275394605999,2.72230699869469,3.80085734885034,4.2333210321745,5.2594605981706,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr1:69730865..69730887,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=928 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:69730865..69730887,- | |||
|id=chr1:69730865..69730887,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.04e-10!29;UBERON:0003408!9.44e-10!24;UBERON:0006562!1.37e-09!24;UBERON:0001557!1.37e-09!24;UBERON:0001042!1.37e-09!24;UBERON:0008814!1.37e-09!24;UBERON:0009145!1.37e-09!24;UBERON:0002370!4.87e-09!23;UBERON:0000974!4.87e-09!23;UBERON:0004807!4.87e-09!23;UBERON:0005058!4.87e-09!23;UBERON:0003351!4.87e-09!23;UBERON:0009113!4.87e-09!23;UBERON:0003295!4.87e-09!23;UBERON:0009722!4.87e-09!23;UBERON:0005562!4.87e-09!23;UBERON:0007690!4.87e-09!23;UBERON:0000072!5.50e-09!27;UBERON:0005057!1.64e-07!51;UBERON:0001004!4.62e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.38e-24,23;UBERON:0000974,3.38e-24,23;UBERON:0004807,3.38e-24,23;UBERON:0005058,3.38e-24,23;UBERON:0003351,3.38e-24,23;UBERON:0009113,3.38e-24,23;UBERON:0003295,3.38e-24,23;UBERON:0009722,3.38e-24,23;UBERON:0005562,3.38e-24,23;UBERON:0007690,3.38e-24,23;UBERON:0006562,4.39e-23,24;UBERON:0003408,4.39e-23,24;UBERON:0001557,4.39e-23,24;UBERON:0001042,4.39e-23,24;UBERON:0008814,4.39e-23,24;UBERON:0009145,4.39e-23,24;UBERON:0000072,3.07e-20,27;UBERON:0004177,1.14e-18,29;UBERON:0005057,1.14e-18,29;UBERON:0000077,1.64e-17,35;UBERON:0007811,7.63e-17,36;UBERON:0002193,7.32e-14,48;UBERON:0002405,7.32e-14,48;UBERON:0000153,1.18e-13,43;UBERON:0002390,5.12e-13,45;UBERON:0003061,5.12e-13,45;UBERON:0000065,1.84e-12,41;UBERON:0001004,4.19e-12,42;UBERON:0003929,1.20e-08,55;UBERON:0002368,1.02e-07,60;UBERON:0002530,6.22e-07,65;UBERON:0000490,8.64e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,7.618276083053,0.422366166455,0,0,0,0,0,0,0,0,0,0.411343300817216,0,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,1.03575153458869,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,1.27070227073065,0.149790639404823,0,1.00523481690292,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,1.80143534980301,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.763877555344259,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0687439117814,0.161464426695906,0.120625849856312,0.238744688006273,1.96969079694074,0,0,0.170870880797853,0,0.740778109478847,0.188368457004691,0.136694227721025,0,0.509935289981566,0.979660166265606,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.16011120628178,0.810900861160657,1.1298205288131,2.98817892848929,2.32734704367726,4.56967115996909,2.88469078847925,3.10148007066612,3.12995994839258,3.96275394605999,2.72230699869469,3.80085734885034,4.2333210321745,5.2594605981706,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr1:69730865..69730887,- | |||
}} |
Revision as of 20:48, 13 September 2013
Short description: | p@chr1:69730865..69730887, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:69730865..69730887, - |
Coexpression cluster: | MCL_coexpression_mm9:928 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.38e-24 | 23 |
neck | 3.38e-24 | 23 |
respiratory system epithelium | 3.38e-24 | 23 |
hemolymphoid system gland | 3.38e-24 | 23 |
pharyngeal epithelium | 3.38e-24 | 23 |
thymic region | 3.38e-24 | 23 |
pharyngeal gland | 3.38e-24 | 23 |
entire pharyngeal arch endoderm | 3.38e-24 | 23 |
thymus primordium | 3.38e-24 | 23 |
early pharyngeal endoderm | 3.38e-24 | 23 |
pharynx | 4.39e-23 | 24 |
gland of gut | 4.39e-23 | 24 |
upper respiratory tract | 4.39e-23 | 24 |
chordate pharynx | 4.39e-23 | 24 |
pharyngeal arch system | 4.39e-23 | 24 |
pharyngeal region of foregut | 4.39e-23 | 24 |
segment of respiratory tract | 3.07e-20 | 27 |
hemopoietic organ | 1.14e-18 | 29 |
immune organ | 1.14e-18 | 29 |
mixed endoderm/mesoderm-derived structure | 1.64e-17 | 35 |
craniocervical region | 7.63e-17 | 36 |
hemolymphoid system | 7.32e-14 | 48 |
immune system | 7.32e-14 | 48 |
anterior region of body | 1.18e-13 | 43 |
hematopoietic system | 5.12e-13 | 45 |
blood island | 5.12e-13 | 45 |
respiratory tract | 1.84e-12 | 41 |
respiratory system | 4.19e-12 | 42 |
gut epithelium | 1.20e-08 | 55 |
endocrine gland | 1.02e-07 | 60 |
gland | 6.22e-07 | 65 |
unilaminar epithelium | 8.64e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.