FFCP PHASE1:Mm9::chrX:98989738..98989756,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2468|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:98989738..98989756,-|id=chrX:98989738..98989756,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,5.68e-08,3;CL:0000351,5.68e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!7.11e-17!18;UBERON:0005564!7.11e-17!18;UBERON:0004176!1.27e-15!17;UBERON:0009196!1.27e-15!17;UBERON:0009117!1.27e-15!17;UBERON:0005156!3.88e-15!26;UBERON:0000990!3.88e-15!26;UBERON:0003133!4.86e-15!24;UBERON:0000473!3.11e-14!14;UBERON:0003101!5.43e-14!16;UBERON:0000079!5.43e-14!16;UBERON:0003135!4.86e-13!15;UBERON:0002323!9.83e-09!37;UBERON:0004458!9.83e-09!37;UBERON:0003886!2.28e-08!38;UBERON:0002553!5.05e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.67e-51,18;UBERON:0005564,1.67e-51,18;UBERON:0004176,3.02e-47,17;UBERON:0009196,3.02e-47,17;UBERON:0009117,3.02e-47,17;UBERON:0003133,8.13e-44,24;UBERON:0000473,2.36e-41,14;UBERON:0005156,2.68e-40,26;UBERON:0000990,2.68e-40,26;UBERON:0003135,1.68e-38,15;UBERON:0003101,5.25e-36,16;UBERON:0000079,5.25e-36,16;UBERON:0002323,4.31e-24,37;UBERON:0004458,4.31e-24,37;UBERON:0003886,2.09e-23,38;UBERON:0002553,9.34e-23,39;UBERON:0000926,3.08e-08,120;UBERON:0004120,3.08e-08,120;UBERON:0006603,3.08e-08,120;UBERON:0000358,5.68e-08,3;UBERON:0000307,5.68e-08,3;UBERON:0007010,5.68e-08,3;UBERON:0000992,2.23e-07,3;UBERON:0005631,2.23e-07,3;UBERON:0000478,2.23e-07,3;UBERON:0000158,2.23e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0,0,2.96633961281249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,1.19420560091096,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,2.67098405500883,1.30309567482861,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,5.07323644815771,2.24274819065968,1.65458490457098,2.33341426012857,1.16243841129958,1.68956125490778,1.87771581833206,4.29674469985035,11.1150905091254,4.59009829569411,5.18454011264158,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0,0,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,5.10567692760349,0,7.72269235274761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chrX:98989738..98989756,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2468 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:98989738..98989756,- | |||
|id=chrX:98989738..98989756,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.68e-08,3;CL:0000351,5.68e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.11e-17!18;UBERON:0005564!7.11e-17!18;UBERON:0004176!1.27e-15!17;UBERON:0009196!1.27e-15!17;UBERON:0009117!1.27e-15!17;UBERON:0005156!3.88e-15!26;UBERON:0000990!3.88e-15!26;UBERON:0003133!4.86e-15!24;UBERON:0000473!3.11e-14!14;UBERON:0003101!5.43e-14!16;UBERON:0000079!5.43e-14!16;UBERON:0003135!4.86e-13!15;UBERON:0002323!9.83e-09!37;UBERON:0004458!9.83e-09!37;UBERON:0003886!2.28e-08!38;UBERON:0002553!5.05e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.67e-51,18;UBERON:0005564,1.67e-51,18;UBERON:0004176,3.02e-47,17;UBERON:0009196,3.02e-47,17;UBERON:0009117,3.02e-47,17;UBERON:0003133,8.13e-44,24;UBERON:0000473,2.36e-41,14;UBERON:0005156,2.68e-40,26;UBERON:0000990,2.68e-40,26;UBERON:0003135,1.68e-38,15;UBERON:0003101,5.25e-36,16;UBERON:0000079,5.25e-36,16;UBERON:0002323,4.31e-24,37;UBERON:0004458,4.31e-24,37;UBERON:0003886,2.09e-23,38;UBERON:0002553,9.34e-23,39;UBERON:0000926,3.08e-08,120;UBERON:0004120,3.08e-08,120;UBERON:0006603,3.08e-08,120;UBERON:0000358,5.68e-08,3;UBERON:0000307,5.68e-08,3;UBERON:0007010,5.68e-08,3;UBERON:0000992,2.23e-07,3;UBERON:0005631,2.23e-07,3;UBERON:0000478,2.23e-07,3;UBERON:0000158,2.23e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0,0,2.96633961281249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,1.19420560091096,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,2.67098405500883,1.30309567482861,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,5.07323644815771,2.24274819065968,1.65458490457098,2.33341426012857,1.16243841129958,1.68956125490778,1.87771581833206,4.29674469985035,11.1150905091254,4.59009829569411,5.18454011264158,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0,0,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,5.10567692760349,0,7.72269235274761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chrX:98989738..98989756,- | |||
}} |
Revision as of 20:21, 14 September 2013
Short description: | p@chrX:98989738..98989756, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:98989738..98989756, - |
Coexpression cluster: | MCL_coexpression_mm9:2468 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.68e-08 | 3 |
trophoblast cell | 5.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gonad | 1.67e-51 | 18 |
gonad primordium | 1.67e-51 | 18 |
external genitalia | 3.02e-47 | 17 |
indifferent external genitalia | 3.02e-47 | 17 |
indifferent gonad | 3.02e-47 | 17 |
reproductive organ | 8.13e-44 | 24 |
testis | 2.36e-41 | 14 |
reproductive structure | 2.68e-40 | 26 |
reproductive system | 2.68e-40 | 26 |
male reproductive organ | 1.68e-38 | 15 |
male organism | 5.25e-36 | 16 |
male reproductive system | 5.25e-36 | 16 |
body cavity | 4.31e-24 | 37 |
body cavity or lining | 4.31e-24 | 37 |
body cavity precursor | 2.09e-23 | 38 |
anatomical cavity | 9.34e-23 | 39 |
mesoderm | 3.08e-08 | 120 |
mesoderm-derived structure | 3.08e-08 | 120 |
presumptive mesoderm | 3.08e-08 | 120 |
blastocyst | 5.68e-08 | 3 |
blastula | 5.68e-08 | 3 |
cleaving embryo | 5.68e-08 | 3 |
female gonad | 2.23e-07 | 3 |
extraembryonic membrane | 2.23e-07 | 3 |
extraembryonic structure | 2.23e-07 | 3 |
membranous layer | 2.23e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.