FFCP PHASE1:Mm9::chr19:24630816..24630827,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:24630816..24630827,+|id=chr19:24630816..24630827,+|ontology_enrichment_celltype=CL:0002563!7.64e-07!9;CL:0002251!7.64e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,1.55e-18,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.29e-09,3;DOID:4045,9.29e-09,3|ontology_enrichment_uberon=UBERON:0000344!1.00e-09!15;UBERON:0001242!3.67e-08!13;UBERON:0000060!3.67e-08!13;UBERON:0001262!3.67e-08!13;UBERON:0004786!3.67e-08!13;UBERON:0003350!7.64e-07!9;UBERON:0004808!7.64e-07!9;UBERON:0001277!7.64e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.94e-09,3;UBERON:0006555,4.94e-09,3;UBERON:0005103,4.94e-09,3;UBERON:0000083,4.94e-09,3;UBERON:0009201,4.94e-09,3;UBERON:0004819,4.94e-09,3;UBERON:0006553,4.94e-09,3;UBERON:0003074,4.94e-09,3;UBERON:0003060,4.94e-09,3;UBERON:0001044,2.43e-07,1;UBERON:0001736,2.43e-07,1;UBERON:0003293,2.43e-07,1;UBERON:0003294,2.43e-07,1;UBERON:0001829,2.43e-07,1;UBERON:0010047,2.43e-07,1;UBERON:0000167,2.43e-07,1;UBERON:0006298,2.43e-07,1;UBERON:0001153,2.79e-07,1;UBERON:0001045,2.79e-07,1;UBERON:0000080,5.56e-07,4;UBERON:0005904,5.56e-07,4;UBERON:0006947,5.56e-07,4;UBERON:0002120,5.56e-07,4;UBERON:0004054,5.56e-07,4;UBERON:0004875,5.56e-07,4;UBERON:0004876,5.56e-07,4;UBERON:0005721,5.56e-07,4;UBERON:0005754,5.56e-07,4;UBERON:0007297,5.56e-07,4;UBERON:0003199,6.32e-07,1|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,0,1.29228598847722,0.861884930743556,0.570070258369122,0.504060259519861,0.886922042621219,0,0,0,4.62162591602039,1.82858109894342,1.42918549383658,2.92972141515835,0.7813353445238,1.0470474879476,0.588231488031014,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0.969750506270444,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0.255715457330331,0,0,0,1.49288364732112,5.81262344397452,0,0.390361328888111,0,0.180062129805349,0.60281927134286,0,0.768682321709099,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.697601834251224,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.951128130562796,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0,0.477937595905104,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,1.86401793926078,1.12738587736838,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr19:24630816..24630827,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:24630816..24630827,+ | |||
|id=chr19:24630816..24630827,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.64e-07!9;CL:0002251!7.64e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.55e-18,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.29e-09,3;DOID:4045,9.29e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.00e-09!15;UBERON:0001242!3.67e-08!13;UBERON:0000060!3.67e-08!13;UBERON:0001262!3.67e-08!13;UBERON:0004786!3.67e-08!13;UBERON:0003350!7.64e-07!9;UBERON:0004808!7.64e-07!9;UBERON:0001277!7.64e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.94e-09,3;UBERON:0006555,4.94e-09,3;UBERON:0005103,4.94e-09,3;UBERON:0000083,4.94e-09,3;UBERON:0009201,4.94e-09,3;UBERON:0004819,4.94e-09,3;UBERON:0006553,4.94e-09,3;UBERON:0003074,4.94e-09,3;UBERON:0003060,4.94e-09,3;UBERON:0001044,2.43e-07,1;UBERON:0001736,2.43e-07,1;UBERON:0003293,2.43e-07,1;UBERON:0003294,2.43e-07,1;UBERON:0001829,2.43e-07,1;UBERON:0010047,2.43e-07,1;UBERON:0000167,2.43e-07,1;UBERON:0006298,2.43e-07,1;UBERON:0001153,2.79e-07,1;UBERON:0001045,2.79e-07,1;UBERON:0000080,5.56e-07,4;UBERON:0005904,5.56e-07,4;UBERON:0006947,5.56e-07,4;UBERON:0002120,5.56e-07,4;UBERON:0004054,5.56e-07,4;UBERON:0004875,5.56e-07,4;UBERON:0004876,5.56e-07,4;UBERON:0005721,5.56e-07,4;UBERON:0005754,5.56e-07,4;UBERON:0007297,5.56e-07,4;UBERON:0003199,6.32e-07,1 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,0,1.29228598847722,0.861884930743556,0.570070258369122,0.504060259519861,0.886922042621219,0,0,0,4.62162591602039,1.82858109894342,1.42918549383658,2.92972141515835,0.7813353445238,1.0470474879476,0.588231488031014,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0.969750506270444,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0.255715457330331,0,0,0,1.49288364732112,5.81262344397452,0,0.390361328888111,0,0.180062129805349,0.60281927134286,0,0.768682321709099,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.697601834251224,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.951128130562796,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0,0.477937595905104,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,1.86401793926078,1.12738587736838,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr19:24630816..24630827,+ | |||
}} |
Revision as of 17:15, 13 September 2013
Short description: | p@chr19:24630816..24630827, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:24630816..24630827, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.55e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 4.94e-09 | 3 |
excretory tube | 4.94e-09 | 3 |
mesonephric epithelium | 4.94e-09 | 3 |
mesonephric tubule | 4.94e-09 | 3 |
nephric duct | 4.94e-09 | 3 |
kidney epithelium | 4.94e-09 | 3 |
renal duct | 4.94e-09 | 3 |
mesonephric duct | 4.94e-09 | 3 |
pronephric duct | 4.94e-09 | 3 |
saliva-secreting gland | 2.43e-07 | 1 |
submandibular gland | 2.43e-07 | 1 |
gland of oral region | 2.43e-07 | 1 |
gland of foregut | 2.43e-07 | 1 |
major salivary gland | 2.43e-07 | 1 |
oral gland | 2.43e-07 | 1 |
oral cavity | 2.43e-07 | 1 |
submandibular gland primordium | 2.43e-07 | 1 |
caecum | 2.79e-07 | 1 |
midgut | 2.79e-07 | 1 |
mesonephros | 5.56e-07 | 4 |
duct of male reproductive system | 5.56e-07 | 4 |
male genital duct | 5.56e-07 | 4 |
pronephros | 5.56e-07 | 4 |
internal male genitalia | 5.56e-07 | 4 |
nephrogenic cord | 5.56e-07 | 4 |
urogenital ridge | 5.56e-07 | 4 |
pronephric mesoderm | 5.56e-07 | 4 |
rostral part of nephrogenic cord | 5.56e-07 | 4 |
presumptive pronephric mesoderm | 5.56e-07 | 4 |
egg chamber | 6.32e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.29e-09 | 3 |
muscle cancer | 9.29e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.