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FFCP PHASE1:Mm9::chrX:50265409..50265538,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70998|HGNC=|MCL_coexpression_id=770|UniProt=Q9D4J7,E9QAG2|association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST00000101587,ENSMUST00000154864,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end|description=CAGE_peak_1_at_Phf6_5end|id=chrX:50265409..50265538,+|ontology_enrichment_celltype=CL:0000542!3.42e-08!13;CL:0000051!3.42e-08!13;CL:0000838!1.38e-07!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,3.42e-08,13;CL:0000051,3.42e-08,13;CL:0000838,1.38e-07,12;CL:0000084,2.05e-07,11;CL:0000827,2.05e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.07e-09!94;UBERON:0004177!8.67e-08!29;UBERON:0002370!1.25e-07!23;UBERON:0000974!1.25e-07!23;UBERON:0004807!1.25e-07!23;UBERON:0005058!1.25e-07!23;UBERON:0003351!1.25e-07!23;UBERON:0009113!1.25e-07!23;UBERON:0003295!1.25e-07!23;UBERON:0009722!1.25e-07!23;UBERON:0005562!1.25e-07!23;UBERON:0007690!1.25e-07!23;UBERON:0007811!2.59e-07!86;UBERON:0003408!5.10e-07!24;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.29e-10,43;UBERON:0007811,2.78e-08,36;UBERON:0004177,8.67e-08,29;UBERON:0005057,8.67e-08,29;UBERON:0002370,1.25e-07,23;UBERON:0000974,1.25e-07,23;UBERON:0004807,1.25e-07,23;UBERON:0005058,1.25e-07,23;UBERON:0003351,1.25e-07,23;UBERON:0009113,1.25e-07,23;UBERON:0003295,1.25e-07,23;UBERON:0009722,1.25e-07,23;UBERON:0005562,1.25e-07,23;UBERON:0007690,1.25e-07,23;UBERON:0003408,5.10e-07,24;UBERON:0006562,5.30e-07,24;UBERON:0001557,5.30e-07,24;UBERON:0001042,5.30e-07,24;UBERON:0008814,5.30e-07,24;UBERON:0009145,5.30e-07,24|phase1_expression=27.5456017020246,3.83872948403297,1.81999695755814,3.32710632437513,2.00358291978539,7.89032577985882,9.81173090501208,30.473104332212,200.060774177518,160.568265056888,86.9787278585565,82.1653237651965,32.1857372270667,32.870071309543,18.9872564234928,21.2599030759317,32.8794082720229,31.7039476185029,37.0208970735495,22.9170411970936,19.3898701544439,39.4185076267515,38.3963690034235,14.5593104742,10.5528269290898,4.59385571292016,5.1691439539089,8.18790684206378,9.69119439227507,9.07308467135751,6.87364583031445,6.35030673459631,9.22597181376855,0,14.731432607315,13.2987716286794,11.4334839506927,10.8818223991596,7.813353445238,20.9409497589519,11.1763982725893,12.9778642142105,16.0218416500281,14.1004436132647,13.3817549209759,13.5824596599644,3.9119567217402,5.01457859675027,3.51497892375155,6.41618666945135,6.43937539476668,5.75010257459886,26.3418691510646,37.7188313845899,39.6590682988108,9.51859913333004,4.87106847895886,7.73508138416164,27.7173551377649,20.6306481916093,20.2826049121977,2.37191172448392,5.33576877666684,2.6996991518442,0,0,2.39680088414724,2.68952813725088,50.4968411942286,29.8363123713036,34.703618622978,8.85518051651791,9.718215801871,45.8115589063928,29.0411777185256,22.9804696652505,15.4162233399144,13.5348578370299,13.9781945263182,26.7729164092293,26.7143919319036,43.7567231267678,12.8424179540635,12.9435400307286,17.5717984943332,22.6864010814724,31.7488848182,37.0934897192348,26.3527152799481,26.072188236841,12.1743085254705,8.60423876981386,2.719885334831,6.47643829965381,7.14754059192436,4.03224198387602,9.97155382935438,24.5419664512403,17.4056623083922,15.1936017039446,19.858922188512,6.41632387071589,5.09610479413291,0,13.6389355837065,15.9616715249312,15.6712577954583,10.6191008138726,36.7691794778984,17.5161724096493,22.5530924795977,11.5696881758614,12.2226213545711,15.3737093363675,13.4051126134703,16.8393232381765,5.6854842578906,6.79616977523585,6.19227386364912,11.9707468961083,12.5879665522424,11.6370060752453,9.31958806090611,17.5668478206928,14.4518227701284,13.7946809812639,28.3961845079031,14.3976655438418,28.5908010914396,21.7196427136993,16.4700217014706,55.5392236338861,22.4233373048037,20.4572365864264,13.9217989854905,17.8465389374533,27.8021463311363,18.2878246796837,27.2940579108369,9.25944165900485,52.1782976280442,33.3358051428536,36.7326744802912,32.250831016843,31.3648261087621,36.1280691203276,26.9860966732019,11.1242449417777,51.3051823180164,55.5971875693389,48.7384613934138,29.8106196101502,30.3071501655902,17.7608604926305,21.6071243228341,35.4280994936918,18.9597560574573,16.9849618695712,20.4597719564827,18.2270679831242,20.6382932783365,15.1252131627252,19.176323582402,12.0026181365916,12.1871019181029,12.3242990717716,14.7550370769791,8.52386999280337,12.5065485934245,10.8350526292203,8.02581214503972,9.64919917007193,9.22110484222413,8.45500438190342,20.6084149592845,53.4074938248486,2.97376904685418,7.1401652999157,46.0702621156105,36.4611574820889,21.7786009634338,17.9498336914775,13.5650606745371,16.3594038456801,16.6085171540579,10.8701310117847,9.80207314321051,10.7436494902221,11.8928093142663,11.6846523125049,8.42938394511308,10.1562049359727,12.1387456609972,32.2180805559435,34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|EntrezGene=70998
|HGNC=
|MCL_coexpression_id=770
|UniProt=Q9D4J7,E9QAG2
|association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST00000101587,ENSMUST00000154864,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end
|description=CAGE_peak_1_at_Phf6_5end
|id=chrX:50265409..50265538,+
|ontology_enrichment_celltype=CL:0000542!3.42e-08!13;CL:0000051!3.42e-08!13;CL:0000838!1.38e-07!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000542,3.42e-08,13;CL:0000051,3.42e-08,13;CL:0000838,1.38e-07,12;CL:0000084,2.05e-07,11;CL:0000827,2.05e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.07e-09!94;UBERON:0004177!8.67e-08!29;UBERON:0002370!1.25e-07!23;UBERON:0000974!1.25e-07!23;UBERON:0004807!1.25e-07!23;UBERON:0005058!1.25e-07!23;UBERON:0003351!1.25e-07!23;UBERON:0009113!1.25e-07!23;UBERON:0003295!1.25e-07!23;UBERON:0009722!1.25e-07!23;UBERON:0005562!1.25e-07!23;UBERON:0007690!1.25e-07!23;UBERON:0007811!2.59e-07!86;UBERON:0003408!5.10e-07!24;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.29e-10,43;UBERON:0007811,2.78e-08,36;UBERON:0004177,8.67e-08,29;UBERON:0005057,8.67e-08,29;UBERON:0002370,1.25e-07,23;UBERON:0000974,1.25e-07,23;UBERON:0004807,1.25e-07,23;UBERON:0005058,1.25e-07,23;UBERON:0003351,1.25e-07,23;UBERON:0009113,1.25e-07,23;UBERON:0003295,1.25e-07,23;UBERON:0009722,1.25e-07,23;UBERON:0005562,1.25e-07,23;UBERON:0007690,1.25e-07,23;UBERON:0003408,5.10e-07,24;UBERON:0006562,5.30e-07,24;UBERON:0001557,5.30e-07,24;UBERON:0001042,5.30e-07,24;UBERON:0008814,5.30e-07,24;UBERON:0009145,5.30e-07,24
|phase1_expression=27.5456017020246,3.83872948403297,1.81999695755814,3.32710632437513,2.00358291978539,7.89032577985882,9.81173090501208,30.473104332212,200.060774177518,160.568265056888,86.9787278585565,82.1653237651965,32.1857372270667,32.870071309543,18.9872564234928,21.2599030759317,32.8794082720229,31.7039476185029,37.0208970735495,22.9170411970936,19.3898701544439,39.4185076267515,38.3963690034235,14.5593104742,10.5528269290898,4.59385571292016,5.1691439539089,8.18790684206378,9.69119439227507,9.07308467135751,6.87364583031445,6.35030673459631,9.22597181376855,0,14.731432607315,13.2987716286794,11.4334839506927,10.8818223991596,7.813353445238,20.9409497589519,11.1763982725893,12.9778642142105,16.0218416500281,14.1004436132647,13.3817549209759,13.5824596599644,3.9119567217402,5.01457859675027,3.51497892375155,6.41618666945135,6.43937539476668,5.75010257459886,26.3418691510646,37.7188313845899,39.6590682988108,9.51859913333004,4.87106847895886,7.73508138416164,27.7173551377649,20.6306481916093,20.2826049121977,2.37191172448392,5.33576877666684,2.6996991518442,0,0,2.39680088414724,2.68952813725088,50.4968411942286,29.8363123713036,34.703618622978,8.85518051651791,9.718215801871,45.8115589063928,29.0411777185256,22.9804696652505,15.4162233399144,13.5348578370299,13.9781945263182,26.7729164092293,26.7143919319036,43.7567231267678,12.8424179540635,12.9435400307286,17.5717984943332,22.6864010814724,31.7488848182,37.0934897192348,26.3527152799481,26.072188236841,12.1743085254705,8.60423876981386,2.719885334831,6.47643829965381,7.14754059192436,4.03224198387602,9.97155382935438,24.5419664512403,17.4056623083922,15.1936017039446,19.858922188512,6.41632387071589,5.09610479413291,0,13.6389355837065,15.9616715249312,15.6712577954583,10.6191008138726,36.7691794778984,17.5161724096493,22.5530924795977,11.5696881758614,12.2226213545711,15.3737093363675,13.4051126134703,16.8393232381765,5.6854842578906,6.79616977523585,6.19227386364912,11.9707468961083,12.5879665522424,11.6370060752453,9.31958806090611,17.5668478206928,14.4518227701284,13.7946809812639,28.3961845079031,14.3976655438418,28.5908010914396,21.7196427136993,16.4700217014706,55.5392236338861,22.4233373048037,20.4572365864264,13.9217989854905,17.8465389374533,27.8021463311363,18.2878246796837,27.2940579108369,9.25944165900485,52.1782976280442,33.3358051428536,36.7326744802912,32.250831016843,31.3648261087621,36.1280691203276,26.9860966732019,11.1242449417777,51.3051823180164,55.5971875693389,48.7384613934138,29.8106196101502,30.3071501655902,17.7608604926305,21.6071243228341,35.4280994936918,18.9597560574573,16.9849618695712,20.4597719564827,18.2270679831242,20.6382932783365,15.1252131627252,19.176323582402,12.0026181365916,12.1871019181029,12.3242990717716,14.7550370769791,8.52386999280337,12.5065485934245,10.8350526292203,8.02581214503972,9.64919917007193,9.22110484222413,8.45500438190342,20.6084149592845,53.4074938248486,2.97376904685418,7.1401652999157,46.0702621156105,36.4611574820889,21.7786009634338,17.9498336914775,13.5650606745371,16.3594038456801,16.6085171540579,10.8701310117847,9.80207314321051,10.7436494902221,11.8928093142663,11.6846523125049,8.42938394511308,10.1562049359727,12.1387456609972,32.2180805559435,34.9393980586549,24.2345080135924,22.8863934857798,19.2172146499473,21.5004226222475,15.941895981797,16.0138702398202,11.4759362447274,9.19003143970162,15.6834399373128,14.1522476481506,14.6160373050155,15.4173692255262,13.2647437863829,10.6942857748196,12.6586300478357,8.75530224585191,12.6298250066517,8.62609239164127,9.30352369171258,9.36113019343682,10.3557339958316,13.6342034276653,8.68398338454061,18.1058126363273,33.3504884716053,36.9930496523399,37.1741737847662,23.4690248288502,22.4458384972033,15.7108802984769,15.0252908850505,15.6058792665129,19.710357378741,17.8589340896386,12.9452018625433,20.2041428783098,12.2951699794285,7.53956419696361,8.15858525728064,13.277635371514,9.3818493743609,17.9816660786327,16.175212749724,25.9017213695147,7.06918596172244,24.2941328950518,26.5498346121714,31.2363926712558,25.3306925829705,23.8394581268162,24.6276581786284,26.717506310543,19.5811424800579,22.9266911208984,21.2072068838393,14.6198287764517,18.6968883850618,21.3381916753185,19.9613848796768,1.32745138339963,19.6652315285535,21.1626489875326,13.7681708221806,3.2483208216885,15.0643222492524,8.78656196771952,14.5413491791002,16.3988794056972,13.5895805912401,8.4334886859999,6.18813259489121,18.7241783164583,43.7548458496084,14.6175312674513,24.0057479235383,21.8128487379996,19.7989387538298,23.0368628842969,7.61162372786498,5.39744928546534,2.75381692122966,9.04166432025344,9.8931751764888,11.948367575497,19.8429523013633,17.0702451924485,16.4140899745061,9.91034844541493,14.0923229527987,18.7957968877638,21.0514605322487,21.6677597022563,20.5321618135113,22.1444648908061,19.6749228957609,32.2959016988325,32.0488825821177,32.0623939226263,8.59203556213602,43.9707031077778,21.1452245811923,27.5413619095593,18.1906817532588,15.7221045897248,15.1048067950999,11.9847510801737,8.89970202745701,9.46189305030088,11.8054469486516,46.7865139107878,33.4917063138513,24.4878565876504,25.6675568614143,21.3113708738256,31.5947954667755,24.5276628769626,27.9939427414493,13.421996086491,14.4950472495604,29.0910306320444,34.1292010278433,27.7733544947525,27.5265365201737,29.4920268159595,35.4472857421613,35.9613252154089,32.6931622694315,40.0238618643104,39.1749825798813,37.7985761008799,39.5238645736415,37.6187419655444,40.1203379640174,42.7769461984542,11.5632495643758,4.21773311410723,4.30626511725483,4.86865387455827,14.1028403643499,10.322536149815,17.3994043053902,15.4345232936927,14.0440189129902,20.3310663342144,20.714635642823,14.3223878359849,13.9201077698387,17.8121455140367,17.3740596399631,13.5004500046361,13.9599572999508,17.2194115413998,14.497288729051,63.5178567215161,53.8683579091392,37.7321268716637,23.0951381214879,24.5247400274739,20.7743164548516,14.6682840349066,22.4578212390395,15.7250412699989,20.2157769411038,16.9831130926461,19.9943921869241,20.3202071209645,20.7441493791776,19.9875431965534,15.7176918123414,16.9191115879489,21.0271050305439,24.7251540481984,16.4862790550525,15.0862471049583,17.3926290036151,15.2599161566285,20.9298839950553,22.209813778018,21.0690373650274,17.9269413415317,17.3626009548976,18.4693594830372,17.3954104213899,16.371632501136,16.9427709685969,18.0061658994663,22.775715654337,16.5899685443782,22.982573170291,18.7145286756327,16.9748132698156,8.60797494309795,12.3531194706929,11.1296561097802
|short_description=p1@Phf6
}}

Revision as of 19:52, 14 September 2013

Short description:p1@Phf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Phf6_5end
Coexpression cluster:MCL_coexpression_mm9:770
Association with transcript: 0bp_to_ENSMUST00000078944, ENSMUST00000101587, ENSMUST00000154864, NM_027642, uc009ten.1, uc009teo.1, uc009tep.1, uc009teq.1_5end
EntrezGene:Phf6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Phf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7200.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2160.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E686.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F182.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E832.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.70
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A437.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I938.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.55
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B99.69
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A226.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I937.72
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A139.66
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C327.72
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.70
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.81
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D843.76
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D926.35
Mouse Schwann, donor2.CNhs12573.11746-123F926.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.62
accessory axillary lymph node, adult.CNhs10475.1063-29H936.77
adrenal gland, adult.CNhs10508.49-24D717.52
adrenal gland, embryo E14.CNhs11038.406-44C522.55
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I112.22
adrenal gland, embryo E18.CNhs11026.1262-18F515.37
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I316.84
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F511.97
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.59
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F155.54
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.29
epididymis, adult.CNhs10490.58-23B227.29
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C652.18
eyeball, embryo E14.CNhs10521.399-16E233.34
eyeball, embryo E15.CNhs10593.426-16C936.73
eyeball, embryo E17.CNhs11023.1261-18D432.25
eyeball, neonate N00.CNhs11207.633-15C631.36
eyeball, neonate N01.CNhs11140.1532-43E736.13
eyeball, neonate N02.CNhs11205.1551-44G826.99
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E251.31
forelimb, embryo E12.CNhs10600.359-14H255.60
forelimb, embryo E13.CNhs10589.384-1E248.74
forelimb, embryo E14.CNhs10577.413-26A829.81
forelimb, embryo E15.CNhs11007.437-20E730.31
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B521.61
gonad, embryo E13.CNhs11044.1564-45I635.43
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.46
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F520.64
heart, embryo E13.CNhs11013.376-3I915.13
heart, embryo E14.CNhs10597.403-26D419.18
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E512.32
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G110.84
heart, neonate N16.CNhs11209.782-15G18.03
heart, neonate N20.CNhs11127.821-26I69.65
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D28.46
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G153.41
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I546.07
intestine, embryo E13.CNhs11010.381-16D536.46
intestine, embryo E15.CNhs10602.976-16D821.78
intestine, embryo E16.CNhs10585.463-22H417.95
intestine, embryo E17.CNhs10582.482-18D313.57
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G110.16
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F832.22
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I224.23
kidney, embryo E18.CNhs11001.1288-20C722.89
kidney, neonate N00.CNhs11214.646-21G719.22
kidney, neonate N10.CNhs11206.758-6D521.50
kidney, neonate N20.CNhs11113.832-19I115.94
kidney, neonate N25.CNhs11122.1353-25F316.01
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F815.68
liver, embryo E13.CNhs10524.378-3H614.15
liver, embryo E14.CNhs10594.409-16E114.62
liver, embryo E15.CNhs10520.433-16D715.42
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A310.69
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F48.76
liver, neonate N03.CNhs11123.1345-25G212.63
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H113.63
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B118.11
lung, embryo E12.CNhs10522.354-16G233.35
lung, embryo E14.CNhs10604.404-26F836.99
lung, embryo E15.CNhs11020.432-17C537.17
lung, embryo E16.CNhs10998.458-17B623.47
lung, embryo E17.CNhs10605.480-44A622.45
lung, embryo E18.CNhs10583.1287-20I615.71
lung, neonate N00.CNhs11224.640-42C615.03
lung, neonate N06.CNhs11212.683-20E515.61
lung, neonate N07.CNhs11111.715-19A319.71
lung, neonate N10.CNhs11219.750-23E617.86
lung, neonate N20.CNhs11109.822-18A412.95
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H212.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A316.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C725.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.29
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.55
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.24
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I714.62
ovary, embryo E18.CNhs11040.505-44H718.70
ovary, neonate N00.CNhs11217.1299-22I421.34
oviduct, adult pregnant day01.CNhs10500.988-6G619.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F419.67
pancreas, embryo E15.CNhs11042.1556-45F221.16
pancreas, embryo E16.CNhs11003.460-26E513.77
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E643.75
pituitary gland, embryo E13.CNhs11009.370-44C714.62
pituitary gland, embryo E14.CNhs11037.398-44A524.01
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F619.80
pituitary gland, embryo E17.CNhs11039.1265-44F523.04
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C39.89
skin, neonate N00.CNhs11124.650-25G411.95
skin, neonate N03.CNhs11215.662-22H319.84
skin, neonate N06.CNhs11097.693-20I517.07
skin, neonate N10.CNhs11108.762-6C416.41
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G218.80
spleen, embryo E16.CNhs11035.461-43C121.05
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D120.53
spleen, neonate N20.CNhs11112.824-19H122.14
spleen, neonate N25.CNhs11099.1354-25G319.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.06
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E343.97
stomach, embryo E15.CNhs10603.1252-16G821.15
stomach, embryo E16.CNhs11022.459-17D427.54
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C615.72
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A911.98
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I19.46
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G546.79
testis, embryo E13.CNhs11031.389-23F533.49
testis, embryo E15.CNhs11034.443-27C524.49
testis, embryo E16.CNhs11033.470-26G525.67
testis, embryo E17.CNhs11029.486-18I521.31
testis, embryo E18.CNhs11027.503-18G531.59
testis, neonate N00.CNhs11189.1300-22B724.53
testis, neonate N07.CNhs11222.726-26I427.99
testis, neonate N10.CNhs11204.763-44D913.42
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E229.09
thymus, adult.CNhs10471.38-12B534.13
thymus, embryo E14.CNhs11041.402-44I427.77
thymus, embryo E15.CNhs11005.430-45I227.53
thymus, embryo E16.CNhs11002.456-26C529.49
thymus, embryo E17.CNhs10581.478-18C135.45
thymus, embryo E18.CNhs10595.1273-19G435.96
thymus, neonate N02.CNhs11181.1541-43F832.69
thymus, neonate N03.CNhs11137.2104-43C740.02
thymus, neonate N06.CNhs11197.681-26C439.17
thymus, neonate N07.CNhs11211.713-19D337.80
thymus, neonate N10.CNhs11194.748-24E439.52
thymus, neonate N20.CNhs11186.820-7A237.62
thymus, neonate N25.CNhs11125.1362-25G740.12
thymus, neonate N30.CNhs11132.1393-42G242.78
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E517.40
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I863.52
whole body, embryo E12.CNhs10587.857-27C953.87
whole body, embryo E13.CNhs10512.372-23H237.73
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B124.52
whole body, embryo E16.CNhs10514.453-14F220.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.93
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.78
whole body, embryo E17.5.CNhs10513.490-9F916.59
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B318.71
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B411.13





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte3.42e-0813
common lymphoid progenitor3.42e-0813
lymphoid lineage restricted progenitor cell1.38e-0712
T cell2.05e-0711
pro-T cell2.05e-0711







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