FFCP PHASE1:Mm9::chr19:53496109..53496137,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=348|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:53496109..53496137,+|id=chr19:53496109..53496137,+|ontology_enrichment_celltype=CL:0000838!3.00e-12!12;CL:0000084!3.54e-11!11;CL:0000827!3.54e-11!11;CL:0000542!5.67e-11!13;CL:0000051!5.67e-11!13;CL:0002031!1.41e-10!25;CL:0000791!2.61e-10!9;CL:0000789!2.61e-10!9;CL:0002420!2.61e-10!9;CL:0002419!2.61e-10!9;CL:0000790!2.61e-10!9;CL:0000063!8.08e-10!66;CL:0000624!2.18e-09!8;CL:0000988!6.38e-09!32;CL:0002032!6.38e-09!32;CL:0000037!6.38e-09!32;CL:0000566!6.38e-09!32;CL:0000837!6.38e-09!32;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000893!2.51e-07!6;CL:0002489!2.51e-07!6;CL:0000898!2.51e-07!6;CL:0000809!2.51e-07!6;CL:0000810!2.51e-07!6;CL:0000895!2.51e-07!6;CL:0000808!2.51e-07!6;CL:0000894!2.51e-07!6;CL:0000806!2.51e-07!6;CL:0000807!2.51e-07!6;CL:0000805!2.51e-07!6;CL:0002425!2.51e-07!6;CL:0002436!2.51e-07!6;CL:0002427!2.51e-07!6;CL:0002428!2.51e-07!6;CL:0002429!2.51e-07!6;CL:0002433!2.51e-07!6;CL:0002431!2.51e-07!6;CL:0002432!2.51e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,2.78e-24,9;CL:0000789,2.78e-24,9;CL:0002420,2.78e-24,9;CL:0002419,2.78e-24,9;CL:0000790,2.78e-24,9;CL:0000838,1.40e-23,12;CL:0000542,1.08e-21,13;CL:0000051,1.08e-21,13;CL:0000624,1.27e-20,8;CL:0000084,9.66e-20,11;CL:0000827,9.66e-20,11;CL:0000738,2.36e-16,17;CL:0002087,2.36e-16,17;CL:0000068,4.47e-14,3;CL:0002202,4.47e-14,3;CL:0000069,4.47e-14,3;CL:0002632,4.47e-14,3;CL:0002368,4.47e-14,3;CL:0000307,4.47e-14,3;CL:0000377,4.47e-14,3;CL:0002031,8.94e-14,25;CL:0000893,7.69e-13,6;CL:0002489,7.69e-13,6;CL:0000898,7.69e-13,6;CL:0000809,7.69e-13,6;CL:0000810,7.69e-13,6;CL:0000895,7.69e-13,6;CL:0000808,7.69e-13,6;CL:0000894,7.69e-13,6;CL:0000806,7.69e-13,6;CL:0000807,7.69e-13,6;CL:0000805,7.69e-13,6;CL:0002425,7.69e-13,6;CL:0002436,7.69e-13,6;CL:0002427,7.69e-13,6;CL:0002428,7.69e-13,6;CL:0002429,7.69e-13,6;CL:0002433,7.69e-13,6;CL:0002431,7.69e-13,6;CL:0002432,7.69e-13,6;CL:0000988,1.78e-10,32;CL:0002032,1.78e-10,32;CL:0000037,1.78e-10,32;CL:0000837,1.78e-10,32;CL:0002076,3.87e-07,15;CL:0002320,6.97e-07,46;CL:0000134,6.97e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!9.66e-13!27;UBERON:0002370!9.52e-11!23;UBERON:0000974!9.52e-11!23;UBERON:0004807!9.52e-11!23;UBERON:0005058!9.52e-11!23;UBERON:0003351!9.52e-11!23;UBERON:0009113!9.52e-11!23;UBERON:0003295!9.52e-11!23;UBERON:0009722!9.52e-11!23;UBERON:0005562!9.52e-11!23;UBERON:0007690!9.52e-11!23;UBERON:0006562!4.80e-10!24;UBERON:0003408!4.80e-10!24;UBERON:0001557!4.80e-10!24;UBERON:0001042!4.80e-10!24;UBERON:0008814!4.80e-10!24;UBERON:0009145!4.80e-10!24;UBERON:0004177!2.99e-09!29;UBERON:0000065!9.50e-09!41;UBERON:0001004!2.34e-08!42;UBERON:0000063!3.43e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.47e-14,3;UBERON:0001005,4.47e-14,3;UBERON:0007196,4.47e-14,3;UBERON:0001558,4.47e-14,3;UBERON:0000072,6.72e-10,27;UBERON:0002384,6.97e-07,46|phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,1.20985684522732,1.00179145989269,0,0,1.29123323441576,10.6999428835267,11.2350972634557,2.39705155515707,1.7549874978974,0.513602189793617,0.786783621770977,0,0,0.699561878128147,0.473193248037357,0.959801035240171,0,0,0.0992909512008853,0.783599367416806,0.319984845586813,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,15.8481681015439,0,0,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,0,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,2.68452169692378,4.35217285206807,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,1.73192832808971,1.26679932737549,2.02209778005913,0.22836775943812,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0,0,0,0,1.86976272993241,1.25956307091292,0.829199842826543,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0,0,0,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0,0,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,1.71642964911851,0.762068066549998,0.806609481094724,0.38983152295901,0.384847366561318,0.818138315270983,0,0.221985953374065,0.179427713218951,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p@chr19:53496109..53496137,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=348 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:53496109..53496137,+ | |||
|id=chr19:53496109..53496137,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.00e-12!12;CL:0000084!3.54e-11!11;CL:0000827!3.54e-11!11;CL:0000542!5.67e-11!13;CL:0000051!5.67e-11!13;CL:0002031!1.41e-10!25;CL:0000791!2.61e-10!9;CL:0000789!2.61e-10!9;CL:0002420!2.61e-10!9;CL:0002419!2.61e-10!9;CL:0000790!2.61e-10!9;CL:0000063!8.08e-10!66;CL:0000624!2.18e-09!8;CL:0000988!6.38e-09!32;CL:0002032!6.38e-09!32;CL:0000037!6.38e-09!32;CL:0000566!6.38e-09!32;CL:0000837!6.38e-09!32;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000893!2.51e-07!6;CL:0002489!2.51e-07!6;CL:0000898!2.51e-07!6;CL:0000809!2.51e-07!6;CL:0000810!2.51e-07!6;CL:0000895!2.51e-07!6;CL:0000808!2.51e-07!6;CL:0000894!2.51e-07!6;CL:0000806!2.51e-07!6;CL:0000807!2.51e-07!6;CL:0000805!2.51e-07!6;CL:0002425!2.51e-07!6;CL:0002436!2.51e-07!6;CL:0002427!2.51e-07!6;CL:0002428!2.51e-07!6;CL:0002429!2.51e-07!6;CL:0002433!2.51e-07!6;CL:0002431!2.51e-07!6;CL:0002432!2.51e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.78e-24,9;CL:0000789,2.78e-24,9;CL:0002420,2.78e-24,9;CL:0002419,2.78e-24,9;CL:0000790,2.78e-24,9;CL:0000838,1.40e-23,12;CL:0000542,1.08e-21,13;CL:0000051,1.08e-21,13;CL:0000624,1.27e-20,8;CL:0000084,9.66e-20,11;CL:0000827,9.66e-20,11;CL:0000738,2.36e-16,17;CL:0002087,2.36e-16,17;CL:0000068,4.47e-14,3;CL:0002202,4.47e-14,3;CL:0000069,4.47e-14,3;CL:0002632,4.47e-14,3;CL:0002368,4.47e-14,3;CL:0000307,4.47e-14,3;CL:0000377,4.47e-14,3;CL:0002031,8.94e-14,25;CL:0000893,7.69e-13,6;CL:0002489,7.69e-13,6;CL:0000898,7.69e-13,6;CL:0000809,7.69e-13,6;CL:0000810,7.69e-13,6;CL:0000895,7.69e-13,6;CL:0000808,7.69e-13,6;CL:0000894,7.69e-13,6;CL:0000806,7.69e-13,6;CL:0000807,7.69e-13,6;CL:0000805,7.69e-13,6;CL:0002425,7.69e-13,6;CL:0002436,7.69e-13,6;CL:0002427,7.69e-13,6;CL:0002428,7.69e-13,6;CL:0002429,7.69e-13,6;CL:0002433,7.69e-13,6;CL:0002431,7.69e-13,6;CL:0002432,7.69e-13,6;CL:0000988,1.78e-10,32;CL:0002032,1.78e-10,32;CL:0000037,1.78e-10,32;CL:0000837,1.78e-10,32;CL:0002076,3.87e-07,15;CL:0002320,6.97e-07,46;CL:0000134,6.97e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!9.66e-13!27;UBERON:0002370!9.52e-11!23;UBERON:0000974!9.52e-11!23;UBERON:0004807!9.52e-11!23;UBERON:0005058!9.52e-11!23;UBERON:0003351!9.52e-11!23;UBERON:0009113!9.52e-11!23;UBERON:0003295!9.52e-11!23;UBERON:0009722!9.52e-11!23;UBERON:0005562!9.52e-11!23;UBERON:0007690!9.52e-11!23;UBERON:0006562!4.80e-10!24;UBERON:0003408!4.80e-10!24;UBERON:0001557!4.80e-10!24;UBERON:0001042!4.80e-10!24;UBERON:0008814!4.80e-10!24;UBERON:0009145!4.80e-10!24;UBERON:0004177!2.99e-09!29;UBERON:0000065!9.50e-09!41;UBERON:0001004!2.34e-08!42;UBERON:0000063!3.43e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.47e-14,3;UBERON:0001005,4.47e-14,3;UBERON:0007196,4.47e-14,3;UBERON:0001558,4.47e-14,3;UBERON:0000072,6.72e-10,27;UBERON:0002384,6.97e-07,46 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,1.20985684522732,1.00179145989269,0,0,1.29123323441576,10.6999428835267,11.2350972634557,2.39705155515707,1.7549874978974,0.513602189793617,0.786783621770977,0,0,0.699561878128147,0.473193248037357,0.959801035240171,0,0,0.0992909512008853,0.783599367416806,0.319984845586813,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,15.8481681015439,0,0,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,0,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,2.68452169692378,4.35217285206807,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,1.73192832808971,1.26679932737549,2.02209778005913,0.22836775943812,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0,0,0,0,1.86976272993241,1.25956307091292,0.829199842826543,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0,0,0,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0,0,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,1.71642964911851,0.762068066549998,0.806609481094724,0.38983152295901,0.384847366561318,0.818138315270983,0,0.221985953374065,0.179427713218951,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr19:53496109..53496137,+ | |||
}} |
Revision as of 18:02, 13 September 2013
Short description: | p@chr19:53496109..53496137, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53496109..53496137, + |
Coexpression cluster: | MCL_coexpression_mm9:348 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trachea | 4.47e-14 | 3 |
respiratory airway | 4.47e-14 | 3 |
tracheobronchial tree | 4.47e-14 | 3 |
lower respiratory tract | 4.47e-14 | 3 |
segment of respiratory tract | 6.72e-10 | 27 |
connective tissue | 6.97e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.