FFCP PHASE1:Mm9::chr6:52184901..52184959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15395|HGNC=|MCL_coexpression_id=1205|UniProt=G3X8P8,P31310|association_with_transcript=0bp_to_ENSMUST00000000962,ENSMUST00000125581,NM_008263,uc009bym.1_5end|description=CAGE_peak_2_at_Hoxa10_5end|id=chr6:52184901..52184959,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!3.70e-15!21;UBERON:0001008!2.17e-11!17;UBERON:0006554!8.95e-11!16;UBERON:0002113!9.34e-10!14;UBERON:0003918!9.34e-10!14;UBERON:0005095!9.34e-10!14;UBERON:0007687!9.34e-10!14;UBERON:0005156!1.29e-09!26;UBERON:0000990!1.29e-09!26;UBERON:0000474!1.15e-08!9;UBERON:0003133!1.77e-08!24;UBERON:0003102!2.28e-08!23;UBERON:0000026!5.22e-08!13;UBERON:0004708!5.22e-08!13;UBERON:0002101!5.22e-08!13;UBERON:0004357!5.22e-08!13;UBERON:0009872!5.22e-08!13;UBERON:0004347!5.22e-08!13;UBERON:0005732!5.22e-08!13;UBERON:0005733!5.22e-08!13;UBERON:0003134!1.02e-07!8;UBERON:0002102!3.12e-07!8;UBERON:0004710!3.12e-07!8;UBERON:0005419!3.12e-07!8;UBERON:0005417!3.12e-07!8;UBERON:0005729!3.12e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.28e-18,21;UBERON:0001008,3.46e-15,19;UBERON:0006554,1.87e-14,18;UBERON:0002113,2.25e-11,14;UBERON:0003918,2.25e-11,14;UBERON:0011143,2.25e-11,14;UBERON:0005095,2.25e-11,14;UBERON:0007687,2.25e-11,14;UBERON:0000474,6.02e-10,9;UBERON:0000026,2.59e-09,12;UBERON:0004708,2.59e-09,12;UBERON:0002101,2.59e-09,12;UBERON:0004357,2.59e-09,12;UBERON:0004347,2.59e-09,12;UBERON:0005732,2.59e-09,12;UBERON:0005733,2.59e-09,12;UBERON:0003134,7.84e-09,8;UBERON:0002102,1.94e-08,7;UBERON:0004710,1.94e-08,7;UBERON:0005419,1.94e-08,7;UBERON:0005417,1.94e-08,7;UBERON:0005729,1.94e-08,7;UBERON:0010707,2.52e-08,13;UBERON:0003102,3.92e-08,22;UBERON:0003100,1.33e-07,11;UBERON:0010708,4.05e-07,8;UBERON:0004175,5.34e-07,9;UBERON:0002240,6.16e-07,6;UBERON:0005174,6.16e-07,6;UBERON:0001137,6.16e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0,0,0,0,0,14.2825492201902,15.9025349485162,0,0,0,0,0,0,0,0,0,0,0,0,28.5789727909458,22.2099822046601,17.8943467992289,0,0,0,0,0,0,0,0,1.12355536105401,5.11290967734173,3.11743205523443,2.47337702157238,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,1.38788261412909,0,0.922461989024234,0,0.23517741427141,0,1.73036477414062,0.144599356919912,0,4.85300549842228,1.54589062922275,3.39412677194655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.220723662038,3.73220911830279,0,0,0,0,0,0,0,0,0,0,51.3051823180164,48.2220504427939,41.348514178528,28.0570537507296,16.1267404550847,13.5818344943645,7.20237477427802,7.16523360546575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,7.46508876873319,5.80591679651096,3.8660238396628,2.21851877085677,2.44615848229357,0.570676878337677,0,1.4822905925161,1.50801125280162,0.795825888164603,0.38992817423824,0,1.29682829924817,1.1948476395262,35.8472332801324,23.0781995471652,22.5415471346161,18.3286195060783,22.6924409986122,13.2556699592702,19.0341976744014,5.60918562322488,6.43694784149637,6.91024117962083,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,4.40014264145633,27.9562997757591,20.8495307972577,73.9066150916959,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,31.4460088805372,8.68511490541663,1.98475558249466,0,2.74489525383039,0.904693873922338,0.835606408021955,1.31312719796049,0,4.45020724825223,0,0,0,0,0.136694227721025,0,0.509935289981566,0.139951452323658,0.276399947608848,0,1.26534397432454,1.21991680276109,0,0,0,0,0,0,5.18459893167171,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.645799117388655,0.337912250981556,0.821500670520278,2.21347454234715,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8186172658027,35.4719878602734,34.7988086107804,4.71610433973945,2.50786052017682,0,0,0,0,0,0,0,0,0,0,9.54843597774425,11.5717213286299,8.02447947044431,4.86213434136588,4.61148957781561,3.12533964365024,3.11145418922261,2.67845574410562,2.88827288632634,2.02157769411038,2.02783439912192,1.88626341386076,2.24739617927718,2.88113185821912,2.35485422718014,3.81034953026459,2.0859178670074,2.50781986602817,2.88460130562315,2.20798380201596,1.02860775715625,2.30718548007139,1.1921809497366,1.88950341622027,2.72917203204459,2.28459441307527,2.56099162021882,1.05227884575137,1.7654534799962,1.68342681497322,2.37270036248348,2.1670986122624,1.22769312950907,3.09873682371932,2.89359916471712,0,2.33931608445408,2.36358159453128,2.86932498103265,1.98532277207564,1.15933917810211|short_description=p2@Hoxa10}} | ||
|EntrezGene=15395 | |||
|HGNC= | |||
|MCL_coexpression_id=1205 | |||
|UniProt=G3X8P8,P31310 | |||
|association_with_transcript=0bp_to_ENSMUST00000000962,ENSMUST00000125581,NM_008263,uc009bym.1_5end | |||
|description=CAGE_peak_2_at_Hoxa10_5end | |||
|id=chr6:52184901..52184959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.70e-15!21;UBERON:0001008!2.17e-11!17;UBERON:0006554!8.95e-11!16;UBERON:0002113!9.34e-10!14;UBERON:0003918!9.34e-10!14;UBERON:0005095!9.34e-10!14;UBERON:0007687!9.34e-10!14;UBERON:0005156!1.29e-09!26;UBERON:0000990!1.29e-09!26;UBERON:0000474!1.15e-08!9;UBERON:0003133!1.77e-08!24;UBERON:0003102!2.28e-08!23;UBERON:0000026!5.22e-08!13;UBERON:0004708!5.22e-08!13;UBERON:0002101!5.22e-08!13;UBERON:0004357!5.22e-08!13;UBERON:0009872!5.22e-08!13;UBERON:0004347!5.22e-08!13;UBERON:0005732!5.22e-08!13;UBERON:0005733!5.22e-08!13;UBERON:0003134!1.02e-07!8;UBERON:0002102!3.12e-07!8;UBERON:0004710!3.12e-07!8;UBERON:0005419!3.12e-07!8;UBERON:0005417!3.12e-07!8;UBERON:0005729!3.12e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.28e-18,21;UBERON:0001008,3.46e-15,19;UBERON:0006554,1.87e-14,18;UBERON:0002113,2.25e-11,14;UBERON:0003918,2.25e-11,14;UBERON:0011143,2.25e-11,14;UBERON:0005095,2.25e-11,14;UBERON:0007687,2.25e-11,14;UBERON:0000474,6.02e-10,9;UBERON:0000026,2.59e-09,12;UBERON:0004708,2.59e-09,12;UBERON:0002101,2.59e-09,12;UBERON:0004357,2.59e-09,12;UBERON:0004347,2.59e-09,12;UBERON:0005732,2.59e-09,12;UBERON:0005733,2.59e-09,12;UBERON:0003134,7.84e-09,8;UBERON:0002102,1.94e-08,7;UBERON:0004710,1.94e-08,7;UBERON:0005419,1.94e-08,7;UBERON:0005417,1.94e-08,7;UBERON:0005729,1.94e-08,7;UBERON:0010707,2.52e-08,13;UBERON:0003102,3.92e-08,22;UBERON:0003100,1.33e-07,11;UBERON:0010708,4.05e-07,8;UBERON:0004175,5.34e-07,9;UBERON:0002240,6.16e-07,6;UBERON:0005174,6.16e-07,6;UBERON:0001137,6.16e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0,0,0,0,0,14.2825492201902,15.9025349485162,0,0,0,0,0,0,0,0,0,0,0,0,28.5789727909458,22.2099822046601,17.8943467992289,0,0,0,0,0,0,0,0,1.12355536105401,5.11290967734173,3.11743205523443,2.47337702157238,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,1.38788261412909,0,0.922461989024234,0,0.23517741427141,0,1.73036477414062,0.144599356919912,0,4.85300549842228,1.54589062922275,3.39412677194655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.220723662038,3.73220911830279,0,0,0,0,0,0,0,0,0,0,51.3051823180164,48.2220504427939,41.348514178528,28.0570537507296,16.1267404550847,13.5818344943645,7.20237477427802,7.16523360546575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,7.46508876873319,5.80591679651096,3.8660238396628,2.21851877085677,2.44615848229357,0.570676878337677,0,1.4822905925161,1.50801125280162,0.795825888164603,0.38992817423824,0,1.29682829924817,1.1948476395262,35.8472332801324,23.0781995471652,22.5415471346161,18.3286195060783,22.6924409986122,13.2556699592702,19.0341976744014,5.60918562322488,6.43694784149637,6.91024117962083,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,4.40014264145633,27.9562997757591,20.8495307972577,73.9066150916959,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,31.4460088805372,8.68511490541663,1.98475558249466,0,2.74489525383039,0.904693873922338,0.835606408021955,1.31312719796049,0,4.45020724825223,0,0,0,0,0.136694227721025,0,0.509935289981566,0.139951452323658,0.276399947608848,0,1.26534397432454,1.21991680276109,0,0,0,0,0,0,5.18459893167171,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.645799117388655,0.337912250981556,0.821500670520278,2.21347454234715,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8186172658027,35.4719878602734,34.7988086107804,4.71610433973945,2.50786052017682,0,0,0,0,0,0,0,0,0,0,9.54843597774425,11.5717213286299,8.02447947044431,4.86213434136588,4.61148957781561,3.12533964365024,3.11145418922261,2.67845574410562,2.88827288632634,2.02157769411038,2.02783439912192,1.88626341386076,2.24739617927718,2.88113185821912,2.35485422718014,3.81034953026459,2.0859178670074,2.50781986602817,2.88460130562315,2.20798380201596,1.02860775715625,2.30718548007139,1.1921809497366,1.88950341622027,2.72917203204459,2.28459441307527,2.56099162021882,1.05227884575137,1.7654534799962,1.68342681497322,2.37270036248348,2.1670986122624,1.22769312950907,3.09873682371932,2.89359916471712,0,2.33931608445408,2.36358159453128,2.86932498103265,1.98532277207564,1.15933917810211 | |||
|short_description=p2@Hoxa10 | |||
}} |
Revision as of 10:17, 14 September 2013
Short description: | p2@Hoxa10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxa10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1205 |
Association with transcript: | 0bp_to_ENSMUST00000000962, ENSMUST00000125581, NM_008263, uc009bym.1_5end |
EntrezGene: | Hoxa10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 9.28e-18 | 21 |
renal system | 3.46e-15 | 19 |
urinary system structure | 1.87e-14 | 18 |
kidney | 2.25e-11 | 14 |
kidney mesenchyme | 2.25e-11 | 14 |
upper urinary tract | 2.25e-11 | 14 |
kidney rudiment | 2.25e-11 | 14 |
kidney field | 2.25e-11 | 14 |
female reproductive system | 6.02e-10 | 9 |
appendage | 2.59e-09 | 12 |
paired limb/fin | 2.59e-09 | 12 |
limb | 2.59e-09 | 12 |
paired limb/fin bud | 2.59e-09 | 12 |
limb bud | 2.59e-09 | 12 |
limb/fin field | 2.59e-09 | 12 |
limb field | 2.59e-09 | 12 |
female reproductive organ | 7.84e-09 | 8 |
forelimb | 1.94e-08 | 7 |
pectoral appendage | 1.94e-08 | 7 |
pectoral appendage bud | 1.94e-08 | 7 |
forelimb bud | 1.94e-08 | 7 |
forelimb/pectoral fin field | 1.94e-08 | 7 |
appendage girdle complex | 2.52e-08 | 13 |
surface structure | 3.92e-08 | 22 |
female organism | 1.33e-07 | 11 |
pectoral complex | 4.05e-07 | 8 |
internal genitalia | 5.34e-07 | 9 |
spinal cord | 6.16e-07 | 6 |
dorsal region element | 6.16e-07 | 6 |
dorsum | 6.16e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.