FFCP PHASE1:Mm9::chr1:23278593..23278604,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:23278593..23278604,+|id=chr1:23278593..23278604,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,8.04e-22,3;CL:0002202,8.04e-22,3;CL:0000069,8.04e-22,3;CL:0002632,8.04e-22,3;CL:0002368,8.04e-22,3;CL:0000307,8.04e-22,3;CL:0000377,8.04e-22,3;CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!3.01e-15!43;UBERON:0002113!2.47e-10!14;UBERON:0003918!2.47e-10!14;UBERON:0005095!2.47e-10!14;UBERON:0007687!2.47e-10!14;UBERON:0006554!1.26e-08!16;UBERON:0007100!3.35e-08!18;UBERON:0000948!3.35e-08!18;UBERON:0005498!3.35e-08!18;UBERON:0004140!3.35e-08!18;UBERON:0009881!3.35e-08!18;UBERON:0004141!3.35e-08!18;UBERON:0003084!3.35e-08!18;UBERON:0007005!3.35e-08!18;UBERON:0004139!3.35e-08!18;UBERON:0004291!3.35e-08!18;UBERON:0004535!3.54e-08!23;UBERON:0001009!3.54e-08!23;UBERON:0001008!6.29e-08!17;UBERON:0004872!6.46e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.46e-30,14;UBERON:0003918,6.46e-30,14;UBERON:0011143,6.46e-30,14;UBERON:0005095,6.46e-30,14;UBERON:0007687,6.46e-30,14;UBERON:0006554,3.74e-23,18;UBERON:0001008,6.61e-22,19;UBERON:0003126,8.04e-22,3;UBERON:0001005,8.04e-22,3;UBERON:0007196,8.04e-22,3;UBERON:0001558,8.04e-22,3;UBERON:0000489,9.12e-20,21;UBERON:0003103,4.23e-18,43;UBERON:0009569,8.67e-14,66;UBERON:0005177,2.52e-11,79;UBERON:0005172,2.52e-10,49;UBERON:0005173,2.52e-10,49;UBERON:0002417,2.52e-10,49;UBERON:0000916,2.52e-10,49;UBERON:0002100,8.61e-10,90;UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1;UBERON:0003104,4.09e-08,61;UBERON:0009142,4.09e-08,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.18850937571846,0,0,0,0,0,0,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,3.24736561516821,2.53359865475099,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.232533944750408,0,0.700592054203017,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.569003702859245,0.456994050438915,2.25415471346161,1.22190796707189,1.35766741017338,3.08597607517402,1.07502113111237,1.32849133181642,1.255989822731,2.71473760627961,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,1.21443210502468,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr1:23278593..23278604,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:23278593..23278604,+ | |||
|id=chr1:23278593..23278604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.04e-22,3;CL:0002202,8.04e-22,3;CL:0000069,8.04e-22,3;CL:0002632,8.04e-22,3;CL:0002368,8.04e-22,3;CL:0000307,8.04e-22,3;CL:0000377,8.04e-22,3;CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!3.01e-15!43;UBERON:0002113!2.47e-10!14;UBERON:0003918!2.47e-10!14;UBERON:0005095!2.47e-10!14;UBERON:0007687!2.47e-10!14;UBERON:0006554!1.26e-08!16;UBERON:0007100!3.35e-08!18;UBERON:0000948!3.35e-08!18;UBERON:0005498!3.35e-08!18;UBERON:0004140!3.35e-08!18;UBERON:0009881!3.35e-08!18;UBERON:0004141!3.35e-08!18;UBERON:0003084!3.35e-08!18;UBERON:0007005!3.35e-08!18;UBERON:0004139!3.35e-08!18;UBERON:0004291!3.35e-08!18;UBERON:0004535!3.54e-08!23;UBERON:0001009!3.54e-08!23;UBERON:0001008!6.29e-08!17;UBERON:0004872!6.46e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.46e-30,14;UBERON:0003918,6.46e-30,14;UBERON:0011143,6.46e-30,14;UBERON:0005095,6.46e-30,14;UBERON:0007687,6.46e-30,14;UBERON:0006554,3.74e-23,18;UBERON:0001008,6.61e-22,19;UBERON:0003126,8.04e-22,3;UBERON:0001005,8.04e-22,3;UBERON:0007196,8.04e-22,3;UBERON:0001558,8.04e-22,3;UBERON:0000489,9.12e-20,21;UBERON:0003103,4.23e-18,43;UBERON:0009569,8.67e-14,66;UBERON:0005177,2.52e-11,79;UBERON:0005172,2.52e-10,49;UBERON:0005173,2.52e-10,49;UBERON:0002417,2.52e-10,49;UBERON:0000916,2.52e-10,49;UBERON:0002100,8.61e-10,90;UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1;UBERON:0003104,4.09e-08,61;UBERON:0009142,4.09e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.18850937571846,0,0,0,0,0,0,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,3.24736561516821,2.53359865475099,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.232533944750408,0,0.700592054203017,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.569003702859245,0.456994050438915,2.25415471346161,1.22190796707189,1.35766741017338,3.08597607517402,1.07502113111237,1.32849133181642,1.255989822731,2.71473760627961,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,1.21443210502468,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:23278593..23278604,+ | |||
}} |
Revision as of 20:11, 13 September 2013
Short description: | p@chr1:23278593..23278604, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:23278593..23278604, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.04e-22 | 3 |
epithelial cell of tracheobronchial tree | 8.04e-22 | 3 |
branched duct epithelial cell | 8.04e-22 | 3 |
epithelial cell of lower respiratory tract | 8.04e-22 | 3 |
respiratory epithelial cell | 8.04e-22 | 3 |
tracheal epithelial cell | 8.04e-22 | 3 |
tracheoblast | 8.04e-22 | 3 |
lining cell | 2.16e-08 | 1 |
meso-epithelial cell | 2.16e-08 | 1 |
endothelial cell | 2.16e-08 | 1 |
endothelial cell of sinusoid | 2.16e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.16e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 6.46e-30 | 14 |
kidney mesenchyme | 6.46e-30 | 14 |
upper urinary tract | 6.46e-30 | 14 |
kidney rudiment | 6.46e-30 | 14 |
kidney field | 6.46e-30 | 14 |
urinary system structure | 3.74e-23 | 18 |
renal system | 6.61e-22 | 19 |
trachea | 8.04e-22 | 3 |
respiratory airway | 8.04e-22 | 3 |
tracheobronchial tree | 8.04e-22 | 3 |
lower respiratory tract | 8.04e-22 | 3 |
cavitated compound organ | 9.12e-20 | 21 |
compound organ | 4.23e-18 | 43 |
subdivision of trunk | 8.67e-14 | 66 |
trunk region element | 2.52e-11 | 79 |
abdomen element | 2.52e-10 | 49 |
abdominal segment element | 2.52e-10 | 49 |
abdominal segment of trunk | 2.52e-10 | 49 |
abdomen | 2.52e-10 | 49 |
trunk | 8.61e-10 | 90 |
bile duct | 2.16e-08 | 1 |
hepatic sinusoid | 2.16e-08 | 1 |
parenchyma | 2.16e-08 | 1 |
abdomen blood vessel | 2.16e-08 | 1 |
sinusoid | 2.16e-08 | 1 |
digestive system duct | 2.16e-08 | 1 |
abdominal segment blood vessel | 2.16e-08 | 1 |
trunk blood vessel | 2.16e-08 | 1 |
liver parenchyma | 2.16e-08 | 1 |
liver lobule | 2.16e-08 | 1 |
biliary system | 2.16e-08 | 1 |
biliary tree | 2.16e-08 | 1 |
biliary bud | 2.16e-08 | 1 |
hepatic duct | 2.16e-08 | 1 |
mesenchyme | 4.09e-08 | 61 |
entire embryonic mesenchyme | 4.09e-08 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.