FFCP PHASE1:Hg19::chr1:16341940..16341950,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C20|description=CAGE_peak_at_chr1:16341940..16341950,+|id=chr1:16341940..16341950,+|ontology_enrichment_celltype=CL:0002580!1.14e-11!3;CL:0002617!2.60e-08!2;CL:0002334!2.01e-07!12|ontology_enrichment_celltype_v019=CL:0002617;1.21e-13;2!CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000214;1.53e-09;3|ontology_enrichment_celltype_v019_2=CL:0002617,1.21e-13,2;CL:0000346,1.30e-09,3;CL:1000428,1.30e-09,3;CL:0000214,1.67e-09,3;CL:0000136,1.65e-07,15|ontology_enrichment_development_v019=UBERON:0010226;3.58e-26;1|ontology_enrichment_disease=DOID:114!4.31e-09!2|ontology_enrichment_disease_v019=DOID:114;8.82e-51;2!DOID:178;2.78e-26;1!DOID:326;2.78e-26;1!DOID:3978;2.78e-26;1!DOID:3394;2.78e-26;1!DOID:5844;2.78e-26;1!DOID:1287;5.23e-26;4|ontology_enrichment_disease_v019_2=DOID:114,8.82e-51,2;DOID:178,2.78e-26,1;DOID:326,2.78e-26,1;DOID:3978,2.78e-26,1;DOID:3394,2.78e-26,1;DOID:5844,2.78e-26,1;DOID:1287,5.23e-26,4|ontology_enrichment_uberon=UBERON:0004151!1.81e-12!3;UBERON:0000310!5.70e-09!10;UBERON:0002081!8.55e-09!2;UBERON:0001443!4.01e-08!11;UBERON:0007100!7.44e-08!27|ontology_enrichment_uberon_v019=UBERON:0002084;3.58e-26;1!UBERON:0002082;3.58e-26;1!UBERON:0007100;1.04e-09;25!UBERON:0004151;1.19e-09;3!UBERON:0001723;1.53e-09;3!UBERON:0006915;1.53e-09;3!UBERON:0007616;1.53e-09;3!UBERON:0002217;1.53e-09;3!UBERON:0002018;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0001033;1.53e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002084,3.58e-26,1;UBERON:0002082,3.58e-26,1;UBERON:0010226,3.58e-26,1;UBERON:0004151,1.19e-09,3;UBERON:0000412,1.30e-09,3;UBERON:0001992,1.30e-09,3;UBERON:0001723,1.41e-09,3;UBERON:0001033,1.41e-09,3;UBERON:0010056,1.41e-09,3;UBERON:0006915,1.67e-09,3;UBERON:0007616,1.67e-09,3;UBERON:0002217,1.67e-09,3;UBERON:0002018,1.67e-09,3;UBERON:0007100,4.87e-09,27|phase1_expression=0.181678379270557,1.2846031433459,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.561320188866147,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,4.99197501247478,8.58452096273142,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,1.71116650542641,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:16341940..16341950,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:16341940..16341950,+ | |||
|id=chr1:16341940..16341950,+ | |||
|ontology_enrichment_celltype=CL:0002580!1.14e-11!3;CL:0002617!2.60e-08!2;CL:0002334!2.01e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.21e-13;2!CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000214;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.21e-13,2;CL:0000346,1.30e-09,3;CL:1000428,1.30e-09,3;CL:0000214,1.67e-09,3;CL:0000136,1.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.58e-26;1 | |||
|ontology_enrichment_disease=DOID:114!4.31e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.82e-51;2!DOID:178;2.78e-26;1!DOID:326;2.78e-26;1!DOID:3978;2.78e-26;1!DOID:3394;2.78e-26;1!DOID:5844;2.78e-26;1!DOID:1287;5.23e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.82e-51,2;DOID:178,2.78e-26,1;DOID:326,2.78e-26,1;DOID:3978,2.78e-26,1;DOID:3394,2.78e-26,1;DOID:5844,2.78e-26,1;DOID:1287,5.23e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.81e-12!3;UBERON:0000310!5.70e-09!10;UBERON:0002081!8.55e-09!2;UBERON:0001443!4.01e-08!11;UBERON:0007100!7.44e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;3.58e-26;1!UBERON:0002082;3.58e-26;1!UBERON:0007100;1.04e-09;25!UBERON:0004151;1.19e-09;3!UBERON:0001723;1.53e-09;3!UBERON:0006915;1.53e-09;3!UBERON:0007616;1.53e-09;3!UBERON:0002217;1.53e-09;3!UBERON:0002018;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0001033;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,3.58e-26,1;UBERON:0002082,3.58e-26,1;UBERON:0010226,3.58e-26,1;UBERON:0004151,1.19e-09,3;UBERON:0000412,1.30e-09,3;UBERON:0001992,1.30e-09,3;UBERON:0001723,1.41e-09,3;UBERON:0001033,1.41e-09,3;UBERON:0010056,1.41e-09,3;UBERON:0006915,1.67e-09,3;UBERON:0007616,1.67e-09,3;UBERON:0002217,1.67e-09,3;UBERON:0002018,1.67e-09,3;UBERON:0007100,4.87e-09,27 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.561320188866147,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,4.99197501247478,8.58452096273142,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,1.71116650542641,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:16341940..16341950,+ | |||
}} |
Revision as of 01:29, 12 September 2013
Short description: | p@chr1:16341940..16341950, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:16341940..16341950, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.21e-13 | 2 |
hair follicle dermal papilla cell | 1.30e-09 | 3 |
stem cell of epidermis | 1.30e-09 | 3 |
synovial cell | 1.67e-09 | 3 |
fat cell | 1.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 3.58e-26 | 1 |
cardiac ventricle | 3.58e-26 | 1 |
future cardiac ventricle | 3.58e-26 | 1 |
cardiac chamber | 1.19e-09 | 3 |
dermal papilla | 1.30e-09 | 3 |
papillary layer of dermis | 1.30e-09 | 3 |
tongue | 1.41e-09 | 3 |
gustatory system | 1.41e-09 | 3 |
future tongue | 1.41e-09 | 3 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
primary circulatory organ | 4.87e-09 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.82e-51 | 2 |
vascular disease | 2.78e-26 | 1 |
ischemia | 2.78e-26 | 1 |
extrinsic cardiomyopathy | 2.78e-26 | 1 |
myocardial ischemia | 2.78e-26 | 1 |
myocardial infarction | 2.78e-26 | 1 |
cardiovascular system disease | 5.23e-26 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.