FFCP PHASE1:Hg19::chr1:151319283..151319314,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9986|TSSclassifier=S|UniProt=F8W689,F8WDU3,F2Z2G0|association_with_transcript=0bp_to_ENST00000392746,ENST00000435314,ENST00000452456_5end|description=CAGE_peak_4_at_RFX5_5end|id=chr1:151319283..151319314,-|ontology_enrichment_celltype=CL:0000988!7.24e-28!182;CL:0000037!1.12e-27!172;CL:0000566!1.12e-27!172;CL:0000738!9.61e-27!140;CL:0002032!1.95e-25!165;CL:0000837!1.95e-25!165;CL:0002031!4.16e-18!124;CL:0002087!1.44e-17!119;CL:0002057!3.13e-13!42;CL:0000763!3.84e-13!112;CL:0000049!3.84e-13!112;CL:0000542!1.66e-12!53;CL:0000051!1.66e-12!53;CL:0000838!2.92e-12!52;CL:0000860!1.23e-11!45;CL:0000945!1.36e-11!24;CL:0000826!1.36e-11!24;CL:0000766!2.77e-10!76;CL:0000557!2.58e-08!71;CL:0000236!1.86e-07!14|ontology_enrichment_celltype_v019=CL:0000945;5.19e-14;24!CL:0000094;4.99e-12;8!CL:0000453;2.28e-11;5!CL:0000081;3.96e-11;11!CL:0000236;2.03e-10;13!CL:0000738;3.65e-09;136!CL:0002087;3.94e-09;104!CL:0000451;1.66e-08;10!CL:0000542;2.61e-08;53!CL:0000990;3.65e-08;8!CL:0002393;4.78e-08;6!CL:0002397;4.78e-08;6!CL:0000988;1.12e-07;177!CL:0000860;2.58e-07;33!CL:0002057;2.58e-07;33!CL:0000775;2.83e-07;3!CL:0000766;3.17e-07;69|ontology_enrichment_celltype_v019_2=CL:0000988,1.88e-34,177;CL:0000738,9.98e-34,136;CL:0000037,1.03e-32,168;CL:0002032,2.43e-29,161;CL:0000837,2.43e-29,161;CL:0002031,1.37e-20,120;CL:0002087,1.78e-19,115;CL:0000763,5.14e-17,108;CL:0000049,5.14e-17,108;CL:0000945,1.98e-14,24;CL:0000826,1.98e-14,24;CL:0000766,7.08e-14,72;CL:0000236,2.30e-12,14;CL:0000838,3.72e-12,52;CL:0000094,4.78e-12,8;CL:0000542,8.19e-12,53;CL:0000051,8.19e-12,53;CL:0000453,2.37e-11,5;CL:0000860,3.42e-11,42;CL:0002057,3.42e-11,42;CL:0000081,3.81e-11,11;CL:0000557,1.88e-10,67;CL:0000473,3.50e-09,48;CL:0000234,3.50e-09,48;CL:0002009,6.70e-09,61;CL:0000451,1.54e-08,10;CL:0000990,4.50e-08,8;CL:0000219,4.82e-08,386;CL:0000839,1.25e-07,66;CL:0000134,1.62e-07,354;CL:0000775,2.50e-07,3;CL:0002194,3.04e-07,59;CL:0000576,3.04e-07,59;CL:0000040,3.04e-07,59;CL:0000559,3.04e-07,59;CL:0002320,4.47e-07,361|ontology_enrichment_development_v019=CL:0002057;4.47e-09;42!CL:0000051;2.61e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.16e-09!102;UBERON:0003061!4.16e-09!102;UBERON:0001474!2.06e-08!86;UBERON:0002193!5.49e-08!112;UBERON:0002371!7.10e-08!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.24e-13,98;UBERON:0003061,7.24e-13,98;UBERON:0002193,7.42e-11,108;UBERON:0002371,1.60e-09,76;UBERON:0001474,2.32e-08,82;UBERON:0002405,4.34e-08,93;UBERON:0004765,4.47e-07,90|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.893922188854576,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0.940364164434263,0.572471974262113,1.09499540058307,1.00434111675842,1.60468152070698,1.47781061009902,1.02324015707783,1.57345710739562,1.15148819429164,0.464448369948228,0,0,0.369754010166788,0.619737604642413,0.995184627411951,7.34001098337118,1.10799081706375,5.41470008169383,3.03815219002193,0,0,0,0.145398238779565,0.755751887377619,0.727752183563449,1.62700325833979,0.822335776043652,0.619412741790207,0,0.768482119587302,1.41889337933151,1.37898272294647,3.87290810150296,4.06279459783025,1.12945403725563,0.545812300115692,0.898893937780338,3.36692281607993,1.28371610830437,4.47535988059329,0.329851300186716,0.598390972864896,0,1.16083695451434,1.13477044938228,0,0.75374599577023,0.521482918420201,0.434377689410233,1.81619850790011,1.47311054395026,1.58231193720442,0.845021145247767,1.06302149982522,1.46761051855863,0.673971786878971,0.750884464207532,0.48217676009124,0,0.59675003159727,0.182664153764634,1.75996244461323,1.09227722252426,1.77901850772711,2.56038133539904,1.60158394814405,1.72425731986345,0,0.954053754535364,3.98449078376614,2.93618594685469,3.05818582500183,3.96513985737078,7.8471198817415,1.05353633910031,0.393419540227666,1.96505381374582,0.822405995998037,0,0.32592226663359,0,0,0.779873198196215,0.883817722424512,0.443067789167242,0.812411591295047,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0.802320587350522,0.289648807765598,2.43806866313962,0.670700859703636,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,1.03988298880475,0.443458794925128,0.702678285545008,0.523916301990851,0,0,0,0,0.132957960518865,1.19245312152671,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,5.27121669744253,3.87780264148325,0,0,0.506522046658319,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9986 | |||
|TSSclassifier=S | |||
|UniProt=F8W689,F8WDU3,F2Z2G0 | |||
|association_with_transcript=0bp_to_ENST00000392746,ENST00000435314,ENST00000452456_5end | |||
|description=CAGE_peak_4_at_RFX5_5end | |||
|id=chr1:151319283..151319314,- | |||
|ontology_enrichment_celltype=CL:0000988!7.24e-28!182;CL:0000037!1.12e-27!172;CL:0000566!1.12e-27!172;CL:0000738!9.61e-27!140;CL:0002032!1.95e-25!165;CL:0000837!1.95e-25!165;CL:0002031!4.16e-18!124;CL:0002087!1.44e-17!119;CL:0002057!3.13e-13!42;CL:0000763!3.84e-13!112;CL:0000049!3.84e-13!112;CL:0000542!1.66e-12!53;CL:0000051!1.66e-12!53;CL:0000838!2.92e-12!52;CL:0000860!1.23e-11!45;CL:0000945!1.36e-11!24;CL:0000826!1.36e-11!24;CL:0000766!2.77e-10!76;CL:0000557!2.58e-08!71;CL:0000236!1.86e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.19e-14;24!CL:0000094;4.99e-12;8!CL:0000453;2.28e-11;5!CL:0000081;3.96e-11;11!CL:0000236;2.03e-10;13!CL:0000738;3.65e-09;136!CL:0002087;3.94e-09;104!CL:0000451;1.66e-08;10!CL:0000542;2.61e-08;53!CL:0000990;3.65e-08;8!CL:0002393;4.78e-08;6!CL:0002397;4.78e-08;6!CL:0000988;1.12e-07;177!CL:0000860;2.58e-07;33!CL:0002057;2.58e-07;33!CL:0000775;2.83e-07;3!CL:0000766;3.17e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.88e-34,177;CL:0000738,9.98e-34,136;CL:0000037,1.03e-32,168;CL:0002032,2.43e-29,161;CL:0000837,2.43e-29,161;CL:0002031,1.37e-20,120;CL:0002087,1.78e-19,115;CL:0000763,5.14e-17,108;CL:0000049,5.14e-17,108;CL:0000945,1.98e-14,24;CL:0000826,1.98e-14,24;CL:0000766,7.08e-14,72;CL:0000236,2.30e-12,14;CL:0000838,3.72e-12,52;CL:0000094,4.78e-12,8;CL:0000542,8.19e-12,53;CL:0000051,8.19e-12,53;CL:0000453,2.37e-11,5;CL:0000860,3.42e-11,42;CL:0002057,3.42e-11,42;CL:0000081,3.81e-11,11;CL:0000557,1.88e-10,67;CL:0000473,3.50e-09,48;CL:0000234,3.50e-09,48;CL:0002009,6.70e-09,61;CL:0000451,1.54e-08,10;CL:0000990,4.50e-08,8;CL:0000219,4.82e-08,386;CL:0000839,1.25e-07,66;CL:0000134,1.62e-07,354;CL:0000775,2.50e-07,3;CL:0002194,3.04e-07,59;CL:0000576,3.04e-07,59;CL:0000040,3.04e-07,59;CL:0000559,3.04e-07,59;CL:0002320,4.47e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-09;42!CL:0000051;2.61e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.16e-09!102;UBERON:0003061!4.16e-09!102;UBERON:0001474!2.06e-08!86;UBERON:0002193!5.49e-08!112;UBERON:0002371!7.10e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.24e-13,98;UBERON:0003061,7.24e-13,98;UBERON:0002193,7.42e-11,108;UBERON:0002371,1.60e-09,76;UBERON:0001474,2.32e-08,82;UBERON:0002405,4.34e-08,93;UBERON:0004765,4.47e-07,90 | |||
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| |||
|short_description=p4@RFX5 | |||
}} |
Revision as of 00:20, 12 September 2013
Short description: | p4@RFX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RFX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392746, ENST00000435314, ENST00000452456_5end |
EntrezGene: | RFX5 |
HGNC: | 9986 |
UniProt: | F8W689F8WDU3F2Z2G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.