FFCP PHASE1:Hg19::chr1:205744177..205744183,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8934|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9789|TSSclassifier=S|UniProt=|association_with_transcript=95bp_to_ENST00000492534_5end|coexpression_cluster_id=C21|description=CAGE_peak_6_at_RAB7L1_5end|id=chr1:205744177..205744183,-|ontology_enrichment_celltype=CL:0000738!2.41e-21!140;CL:0000838!2.13e-20!52;CL:0000988!4.98e-20!182;CL:0000542!6.61e-20!53;CL:0000051!6.61e-20!53;CL:0002087!6.88e-19!119;CL:0000037!8.74e-18!172;CL:0000566!8.74e-18!172;CL:0002032!1.30e-16!165;CL:0000837!1.30e-16!165;CL:0002031!1.67e-16!124;CL:0000080!2.93e-13!6;CL:0000623!1.50e-10!3;CL:0000825!1.50e-10!3;CL:0000084!4.92e-10!25;CL:0000827!4.92e-10!25;CL:0000625!2.70e-09!11;CL:0000990!4.89e-08!8;CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18;CL:0000945!7.78e-07!24;CL:0000826!7.78e-07!24|ontology_enrichment_celltype_v019=CL:0000081;2.76e-11;11!CL:0000767;1.04e-10;3!CL:0000623;1.04e-10;3|ontology_enrichment_celltype_v019_2=CL:0000081,2.83e-11,11;CL:0000623,9.90e-11,3;CL:0000825,9.90e-11,3;CL:0000767,1.09e-10,3;CL:0000988,5.65e-08,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!4.83e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!5.70e-07!15;UBERON:0000179!5.70e-07!15;UBERON:0000463!5.70e-07!15;UBERON:0002390!8.69e-07!102;UBERON:0003061!8.69e-07!102|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0000478;1.97e-11;24!UBERON:0002390;7.89e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0000478,1.97e-11,24|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.472264687882075,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0.68725489096526,0,0.318565414324097,1.30216690771284,0,0,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,6.17819694732514,6.89184866736005,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233|short_description=p6@RAB7L1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9789 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=95bp_to_ENST00000492534_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_6_at_RAB7L1_5end | |||
|id=chr1:205744177..205744183,- | |||
|ontology_enrichment_celltype=CL:0000738!2.41e-21!140;CL:0000838!2.13e-20!52;CL:0000988!4.98e-20!182;CL:0000542!6.61e-20!53;CL:0000051!6.61e-20!53;CL:0002087!6.88e-19!119;CL:0000037!8.74e-18!172;CL:0000566!8.74e-18!172;CL:0002032!1.30e-16!165;CL:0000837!1.30e-16!165;CL:0002031!1.67e-16!124;CL:0000080!2.93e-13!6;CL:0000623!1.50e-10!3;CL:0000825!1.50e-10!3;CL:0000084!4.92e-10!25;CL:0000827!4.92e-10!25;CL:0000625!2.70e-09!11;CL:0000990!4.89e-08!8;CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18;CL:0000945!7.78e-07!24;CL:0000826!7.78e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000081;2.76e-11;11!CL:0000767;1.04e-10;3!CL:0000623;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.83e-11,11;CL:0000623,9.90e-11,3;CL:0000825,9.90e-11,3;CL:0000767,1.09e-10,3;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!4.83e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.70e-07!15;UBERON:0000179!5.70e-07!15;UBERON:0000463!5.70e-07!15;UBERON:0002390!8.69e-07!102;UBERON:0003061!8.69e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0000478;1.97e-11;24!UBERON:0002390;7.89e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0000478,1.97e-11,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.472264687882075,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0.68725489096526,0,0.318565414324097,1.30216690771284,0,0,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,6.17819694732514,6.89184866736005,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p6@RAB7L1 | |||
}} |
Revision as of 03:06, 12 September 2013
Short description: | p6@RAB7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RAB7L1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 95bp_to_ENST00000492534_5end |
EntrezGene: | RAB7L1 |
HGNC: | 9789 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.83e-11 | 11 |
natural killer cell | 9.90e-11 | 3 |
pro-NK cell | 9.90e-11 | 3 |
basophil | 1.09e-10 | 3 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.55e-26 | 10 |
blastocyst | 2.55e-26 | 10 |
blastula | 2.55e-26 | 10 |
bilaminar disc | 2.55e-26 | 10 |
inner cell mass | 2.55e-26 | 10 |
cleaving embryo | 2.55e-26 | 10 |
connecting stalk | 2.55e-26 | 10 |
inner cell mass derived epiblast | 2.55e-26 | 10 |
extraembryonic mesoderm | 2.55e-26 | 10 |
blood | 7.82e-18 | 15 |
haemolymphatic fluid | 7.82e-18 | 15 |
organism substance | 7.82e-18 | 15 |
extraembryonic structure | 1.97e-11 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.