FFCP PHASE1:Hg19::chr1:241695336..241695355,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8564|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6381|TSSclassifier=W|UniProt=O15229|association_with_transcript=-78bp_to_ENST00000366558,ENST00000366559,NM_003679_5end|coexpression_cluster_id=C0|description=CAGE_peak_8_at_KMO_5end|id=chr1:241695336..241695355,+|ontology_enrichment_celltype=CL:0002057!1.22e-65!42;CL:0000860!1.21e-60!45;CL:0002194!1.24e-54!63;CL:0000576!1.24e-54!63;CL:0000040!1.24e-54!63;CL:0000559!1.24e-54!63;CL:0002009!1.16e-52!65;CL:0000766!3.30e-49!76;CL:0000839!3.24e-48!70;CL:0000557!2.11e-47!71;CL:0000763!7.34e-32!112;CL:0000049!7.34e-32!112;CL:0002087!7.67e-26!119;CL:0000738!2.35e-23!140;CL:0002031!5.79e-23!124;CL:0002032!2.84e-18!165;CL:0000837!2.84e-18!165;CL:0000037!3.48e-18!172;CL:0000566!3.48e-18!172;CL:0000988!1.30e-16!182|ontology_enrichment_celltype_v019=CL:0000860;1.22e-72;33!CL:0002057;1.22e-72;33!CL:0000473;3.14e-55;39!CL:0000234;3.14e-55;39!CL:0000576;1.11e-29;48!CL:0000766;1.21e-21;69!CL:0002087;2.01e-13;104!CL:0000763;2.28e-12;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-61,42;CL:0002057,1.30e-61,42;CL:0000473,9.86e-61,48;CL:0000234,9.86e-61,48;CL:0002194,3.59e-48,59;CL:0000576,3.59e-48,59;CL:0000040,3.59e-48,59;CL:0000559,3.59e-48,59;CL:0002009,1.50e-46,61;CL:0000839,6.45e-43,66;CL:0000557,2.96e-42,67;CL:0000766,3.26e-39,72;CL:0000763,1.56e-25,108;CL:0000049,1.56e-25,108;CL:0002087,7.42e-24,115;CL:0002031,8.92e-23,120;CL:0000738,7.57e-20,136;CL:0002032,2.02e-16,161;CL:0000837,2.02e-16,161;CL:0000037,1.21e-15,168;CL:0000988,9.88e-15,177|ontology_enrichment_development_v019=CL:0002057;8.49e-42;42!CL:0000049;1.88e-07;108|ontology_enrichment_disease=DOID:171!5.56e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.60e-41!80;UBERON:0001474!1.94e-37!86;UBERON:0002390!1.27e-35!102;UBERON:0003061!1.27e-35!102;UBERON:0004765!2.89e-32!101;UBERON:0001434!2.89e-32!101;UBERON:0002193!1.66e-31!112;UBERON:0002405!1.92e-30!115;UBERON:0002204!1.35e-15!167;UBERON:0003081!2.01e-11!216;UBERON:0000488!6.60e-07!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-37,76;UBERON:0001474,3.15e-34,82;UBERON:0004765,5.02e-31,90;UBERON:0002405,5.77e-30,93;UBERON:0002390,2.44e-28,98;UBERON:0003061,2.44e-28,98;UBERON:0001434,9.83e-28,100;UBERON:0002193,1.56e-25,108;UBERON:0002204,9.46e-16,167;UBERON:0003081,1.52e-12,203;UBERON:0000926,3.36e-07,315;UBERON:0004120,3.36e-07,315;UBERON:0006603,3.36e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0.697287110717054,0.411167888021826,1.23882548358041,0.28769239232215,0.768482119587302,1.18241114944293,5.5159308917859,7.74581620300591,4.06279459783025,0.188242339542605,0.545812300115692,1.79778787556068,3.67300670845083,15.0836642725764,8.31138263538754,0,0.199463657621632,0.426224750532694,2.32167390902867,2.26954089876456,2.4912889959823,0.251248665256743,0,1.08594422352558,1.21079900526674,5.15588690382591,3.79754864929061,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.3394650599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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |||
|TSSclassifier=W | |||
|UniProt=O15229 | |||
|association_with_transcript=-78bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_KMO_5end | |||
|id=chr1:241695336..241695355,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.22e-65!42;CL:0000860!1.21e-60!45;CL:0002194!1.24e-54!63;CL:0000576!1.24e-54!63;CL:0000040!1.24e-54!63;CL:0000559!1.24e-54!63;CL:0002009!1.16e-52!65;CL:0000766!3.30e-49!76;CL:0000839!3.24e-48!70;CL:0000557!2.11e-47!71;CL:0000763!7.34e-32!112;CL:0000049!7.34e-32!112;CL:0002087!7.67e-26!119;CL:0000738!2.35e-23!140;CL:0002031!5.79e-23!124;CL:0002032!2.84e-18!165;CL:0000837!2.84e-18!165;CL:0000037!3.48e-18!172;CL:0000566!3.48e-18!172;CL:0000988!1.30e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-72;33!CL:0002057;1.22e-72;33!CL:0000473;3.14e-55;39!CL:0000234;3.14e-55;39!CL:0000576;1.11e-29;48!CL:0000766;1.21e-21;69!CL:0002087;2.01e-13;104!CL:0000763;2.28e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-61,42;CL:0002057,1.30e-61,42;CL:0000473,9.86e-61,48;CL:0000234,9.86e-61,48;CL:0002194,3.59e-48,59;CL:0000576,3.59e-48,59;CL:0000040,3.59e-48,59;CL:0000559,3.59e-48,59;CL:0002009,1.50e-46,61;CL:0000839,6.45e-43,66;CL:0000557,2.96e-42,67;CL:0000766,3.26e-39,72;CL:0000763,1.56e-25,108;CL:0000049,1.56e-25,108;CL:0002087,7.42e-24,115;CL:0002031,8.92e-23,120;CL:0000738,7.57e-20,136;CL:0002032,2.02e-16,161;CL:0000837,2.02e-16,161;CL:0000037,1.21e-15,168;CL:0000988,9.88e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.49e-42;42!CL:0000049;1.88e-07;108 | |||
|ontology_enrichment_disease=DOID:171!5.56e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.60e-41!80;UBERON:0001474!1.94e-37!86;UBERON:0002390!1.27e-35!102;UBERON:0003061!1.27e-35!102;UBERON:0004765!2.89e-32!101;UBERON:0001434!2.89e-32!101;UBERON:0002193!1.66e-31!112;UBERON:0002405!1.92e-30!115;UBERON:0002204!1.35e-15!167;UBERON:0003081!2.01e-11!216;UBERON:0000488!6.60e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-37,76;UBERON:0001474,3.15e-34,82;UBERON:0004765,5.02e-31,90;UBERON:0002405,5.77e-30,93;UBERON:0002390,2.44e-28,98;UBERON:0003061,2.44e-28,98;UBERON:0001434,9.83e-28,100;UBERON:0002193,1.56e-25,108;UBERON:0002204,9.46e-16,167;UBERON:0003081,1.52e-12,203;UBERON:0000926,3.36e-07,315;UBERON:0004120,3.36e-07,315;UBERON:0006603,3.36e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0.697287110717054,0.411167888021826,1.23882548358041,0.28769239232215,0.768482119587302,1.18241114944293,5.5159308917859,7.74581620300591,4.06279459783025,0.188242339542605,0.545812300115692,1.79778787556068,3.67300670845083,15.0836642725764,8.31138263538754,0,0.199463657621632,0.426224750532694,2.32167390902867,2.26954089876456,2.4912889959823,0.251248665256743,0,1.08594422352558,1.21079900526674,5.15588690382591,3.79754864929061,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,1.91317428091515,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@KMO | |||
}} |
Revision as of 04:34, 12 September 2013
Short description: | p8@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_KMO_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -78bp_to_ENST00000366558, ENST00000366559, NM_003679_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | O15229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.30e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-61 | 42 |
defensive cell | 9.86e-61 | 48 |
phagocyte | 9.86e-61 | 48 |
monopoietic cell | 3.59e-48 | 59 |
monocyte | 3.59e-48 | 59 |
monoblast | 3.59e-48 | 59 |
promonocyte | 3.59e-48 | 59 |
macrophage dendritic cell progenitor | 1.50e-46 | 61 |
myeloid lineage restricted progenitor cell | 6.45e-43 | 66 |
granulocyte monocyte progenitor cell | 2.96e-42 | 67 |
myeloid leukocyte | 3.26e-39 | 72 |
myeloid cell | 1.56e-25 | 108 |
common myeloid progenitor | 1.56e-25 | 108 |
nongranular leukocyte | 7.42e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.92e-23 | 120 |
leukocyte | 7.57e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.02e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.02e-16 | 161 |
hematopoietic stem cell | 1.21e-15 | 168 |
hematopoietic cell | 9.88e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-37 | 76 |
bone element | 3.15e-34 | 82 |
skeletal element | 5.02e-31 | 90 |
immune system | 5.77e-30 | 93 |
hematopoietic system | 2.44e-28 | 98 |
blood island | 2.44e-28 | 98 |
skeletal system | 9.83e-28 | 100 |
hemolymphoid system | 1.56e-25 | 108 |
musculoskeletal system | 9.46e-16 | 167 |
lateral plate mesoderm | 1.52e-12 | 203 |
mesoderm | 3.36e-07 | 315 |
mesoderm-derived structure | 3.36e-07 | 315 |
presumptive mesoderm | 3.36e-07 | 315 |
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