FFCP PHASE1:Hg19::chr10:5326535..5326549,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:5326535..5326549,-|id=chr10:5326535..5326549,-|ontology_enrichment_celltype=CL:0002057!4.08e-30!42;CL:0002194!1.31e-28!63;CL:0000576!1.31e-28!63;CL:0000040!1.31e-28!63;CL:0000559!1.31e-28!63;CL:0002009!3.41e-27!65;CL:0000860!4.00e-27!45;CL:0000763!8.11e-25!112;CL:0000049!8.11e-25!112;CL:0000766!1.74e-24!76;CL:0000839!5.04e-24!70;CL:0000557!1.91e-23!71;CL:0002032!1.15e-17!165;CL:0000837!1.15e-17!165;CL:0000037!1.05e-16!172;CL:0000566!1.05e-16!172;CL:0002087!2.30e-16!119;CL:0000738!1.43e-14!140;CL:0000988!1.65e-14!182;CL:0002031!3.50e-14!124;CL:0000723!3.13e-11!436;CL:0000048!4.03e-11!430;CL:0000134!4.09e-11!358;CL:0002320!4.36e-11!365;CL:0000034!2.20e-10!444;CL:0000219!1.59e-08!390;CL:0000063!1.13e-07!578;CL:0000003!7.97e-07!722|ontology_enrichment_celltype_v019=CL:0000860;4.23e-89;33!CL:0002057;4.23e-89;33!CL:0000473;5.08e-61;39!CL:0000234;5.08e-61;39!CL:0000576;1.10e-44;48!CL:0000766;7.84e-25;69!CL:0002087;8.01e-12;104!CL:0000763;8.20e-12;100!CL:0000738;8.43e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,5.82e-86,42;CL:0002057,5.82e-86,42;CL:0000473,3.42e-74,48;CL:0000234,3.42e-74,48;CL:0002194,1.87e-61,59;CL:0000576,1.87e-61,59;CL:0000040,1.87e-61,59;CL:0000559,1.87e-61,59;CL:0002009,3.35e-59,61;CL:0000839,3.70e-54,66;CL:0000557,3.07e-53,67;CL:0000766,5.09e-49,72;CL:0000763,4.43e-30,108;CL:0000049,4.43e-30,108;CL:0002087,1.20e-29,115;CL:0002031,4.52e-28,120;CL:0000738,8.27e-24,136;CL:0002032,7.60e-19,161;CL:0000837,7.60e-19,161;CL:0000037,1.01e-17,168;CL:0000988,2.08e-16,177;CL:0000134,3.93e-09,354;CL:0002320,8.99e-09,361;CL:0000219,1.63e-07,386|ontology_enrichment_development_v019=CL:0002057;2.18e-62;42!CL:0000049;3.59e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.56e-21!80;UBERON:0001474!1.64e-18!86;UBERON:0002405!2.49e-17!115;UBERON:0002193!3.85e-16!112;UBERON:0002390!1.49e-15!102;UBERON:0003061!1.49e-15!102;UBERON:0004765!2.04e-15!101;UBERON:0001434!2.04e-15!101;UBERON:0002384!9.94e-11!375;UBERON:0002204!2.07e-09!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-46,76;UBERON:0001474,4.16e-42,82;UBERON:0002405,1.43e-38,93;UBERON:0004765,1.13e-37,90;UBERON:0002390,3.41e-36,98;UBERON:0003061,3.41e-36,98;UBERON:0001434,4.05e-33,100;UBERON:0002193,4.29e-32,108;UBERON:0002204,1.21e-16,167;UBERON:0003081,2.63e-14,203;UBERON:0000926,2.61e-08,315;UBERON:0004120,2.61e-08,315;UBERON:0006603,2.61e-08,315;UBERON:0002384,2.77e-08,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.60435557976113,0.868043482863407,0.223915474239924,0.32389366601898,0.257575567634187,3.05336301437086,4.53451132426571,1.4555043671269,2.09186133215116,2.87817521615278,1.54853185447552,3.74000110018796,4.61089271752381,4.7296445977717,6.20542225325913,4.51839278508678,4.06279459783025,2.25890807451126,3.27487380069415,1.57306439111559,7.34601341690166,7.06043859567406,3.19668562899521,2.63881040149373,5.18605509816243,3.40979800426155,2.90209238628584,5.10646702222026,1.86846674698672,3.26623264833766,4.69334626578181,3.25783267057675,3.63239701580021,7.36555271975129,5.37986058649504,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00311897234407,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0.869409257205157,0,0,0,0.453237370790265,0,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0.870648686496336,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,1.00876629594175,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.431428401637234,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:5326535..5326549,- | |||
|id=chr10:5326535..5326549,- | |||
|ontology_enrichment_celltype=CL:0002057!4.08e-30!42;CL:0002194!1.31e-28!63;CL:0000576!1.31e-28!63;CL:0000040!1.31e-28!63;CL:0000559!1.31e-28!63;CL:0002009!3.41e-27!65;CL:0000860!4.00e-27!45;CL:0000763!8.11e-25!112;CL:0000049!8.11e-25!112;CL:0000766!1.74e-24!76;CL:0000839!5.04e-24!70;CL:0000557!1.91e-23!71;CL:0002032!1.15e-17!165;CL:0000837!1.15e-17!165;CL:0000037!1.05e-16!172;CL:0000566!1.05e-16!172;CL:0002087!2.30e-16!119;CL:0000738!1.43e-14!140;CL:0000988!1.65e-14!182;CL:0002031!3.50e-14!124;CL:0000723!3.13e-11!436;CL:0000048!4.03e-11!430;CL:0000134!4.09e-11!358;CL:0002320!4.36e-11!365;CL:0000034!2.20e-10!444;CL:0000219!1.59e-08!390;CL:0000063!1.13e-07!578;CL:0000003!7.97e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.23e-89;33!CL:0002057;4.23e-89;33!CL:0000473;5.08e-61;39!CL:0000234;5.08e-61;39!CL:0000576;1.10e-44;48!CL:0000766;7.84e-25;69!CL:0002087;8.01e-12;104!CL:0000763;8.20e-12;100!CL:0000738;8.43e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.82e-86,42;CL:0002057,5.82e-86,42;CL:0000473,3.42e-74,48;CL:0000234,3.42e-74,48;CL:0002194,1.87e-61,59;CL:0000576,1.87e-61,59;CL:0000040,1.87e-61,59;CL:0000559,1.87e-61,59;CL:0002009,3.35e-59,61;CL:0000839,3.70e-54,66;CL:0000557,3.07e-53,67;CL:0000766,5.09e-49,72;CL:0000763,4.43e-30,108;CL:0000049,4.43e-30,108;CL:0002087,1.20e-29,115;CL:0002031,4.52e-28,120;CL:0000738,8.27e-24,136;CL:0002032,7.60e-19,161;CL:0000837,7.60e-19,161;CL:0000037,1.01e-17,168;CL:0000988,2.08e-16,177;CL:0000134,3.93e-09,354;CL:0002320,8.99e-09,361;CL:0000219,1.63e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-62;42!CL:0000049;3.59e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.56e-21!80;UBERON:0001474!1.64e-18!86;UBERON:0002405!2.49e-17!115;UBERON:0002193!3.85e-16!112;UBERON:0002390!1.49e-15!102;UBERON:0003061!1.49e-15!102;UBERON:0004765!2.04e-15!101;UBERON:0001434!2.04e-15!101;UBERON:0002384!9.94e-11!375;UBERON:0002204!2.07e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-46,76;UBERON:0001474,4.16e-42,82;UBERON:0002405,1.43e-38,93;UBERON:0004765,1.13e-37,90;UBERON:0002390,3.41e-36,98;UBERON:0003061,3.41e-36,98;UBERON:0001434,4.05e-33,100;UBERON:0002193,4.29e-32,108;UBERON:0002204,1.21e-16,167;UBERON:0003081,2.63e-14,203;UBERON:0000926,2.61e-08,315;UBERON:0004120,2.61e-08,315;UBERON:0006603,2.61e-08,315;UBERON:0002384,2.77e-08,371 | |||
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| |||
|short_description=p@chr10:5326535..5326549,- | |||
}} |
Revision as of 13:38, 10 September 2013
Short description: | p@chr10:5326535..5326549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:5326535..5326549, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.82e-86 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.82e-86 | 42 |
defensive cell | 3.42e-74 | 48 |
phagocyte | 3.42e-74 | 48 |
monopoietic cell | 1.87e-61 | 59 |
monocyte | 1.87e-61 | 59 |
monoblast | 1.87e-61 | 59 |
promonocyte | 1.87e-61 | 59 |
macrophage dendritic cell progenitor | 3.35e-59 | 61 |
myeloid lineage restricted progenitor cell | 3.70e-54 | 66 |
granulocyte monocyte progenitor cell | 3.07e-53 | 67 |
myeloid leukocyte | 5.09e-49 | 72 |
myeloid cell | 4.43e-30 | 108 |
common myeloid progenitor | 4.43e-30 | 108 |
nongranular leukocyte | 1.20e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 4.52e-28 | 120 |
leukocyte | 8.27e-24 | 136 |
hematopoietic oligopotent progenitor cell | 7.60e-19 | 161 |
hematopoietic multipotent progenitor cell | 7.60e-19 | 161 |
hematopoietic stem cell | 1.01e-17 | 168 |
hematopoietic cell | 2.08e-16 | 177 |
mesenchymal cell | 3.93e-09 | 354 |
connective tissue cell | 8.99e-09 | 361 |
motile cell | 1.63e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-46 | 76 |
bone element | 4.16e-42 | 82 |
immune system | 1.43e-38 | 93 |
skeletal element | 1.13e-37 | 90 |
hematopoietic system | 3.41e-36 | 98 |
blood island | 3.41e-36 | 98 |
skeletal system | 4.05e-33 | 100 |
hemolymphoid system | 4.29e-32 | 108 |
musculoskeletal system | 1.21e-16 | 167 |
lateral plate mesoderm | 2.63e-14 | 203 |
mesoderm | 2.61e-08 | 315 |
mesoderm-derived structure | 2.61e-08 | 315 |
presumptive mesoderm | 2.61e-08 | 315 |
connective tissue | 2.77e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.