FFCP PHASE1:Hg19::chr10:30780442..30780455,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:30780442..30780455,+|id=chr10:30780442..30780455,+|ontology_enrichment_celltype=CL:0002057!8.32e-99!42;CL:0000860!8.75e-92!45;CL:0002009!1.01e-64!65;CL:0002194!1.38e-62!63;CL:0000576!1.38e-62!63;CL:0000040!1.38e-62!63;CL:0000559!1.38e-62!63;CL:0000557!9.09e-59!71;CL:0000839!9.12e-56!70;CL:0000766!1.50e-54!76;CL:0002087!9.55e-43!119;CL:0000763!4.29e-40!112;CL:0000049!4.29e-40!112;CL:0000738!5.48e-40!140;CL:0002031!1.29e-35!124;CL:0000037!3.53e-33!172;CL:0000566!3.53e-33!172;CL:0000988!5.90e-31!182;CL:0002032!9.80e-29!165;CL:0000837!9.80e-29!165;CL:0000842!5.70e-15!3;CL:0000134!5.58e-14!358;CL:0002320!1.46e-13!365;CL:0000219!4.36e-12!390;CL:0000224!2.35e-11!4;CL:0000034!1.27e-10!444;CL:0000048!2.55e-10!430;CL:0000723!4.55e-10!436;CL:0002393!5.12e-09!9;CL:0002397!5.12e-09!9;CL:0000080!1.01e-07!6;CL:0000623!4.27e-07!3;CL:0000825!4.27e-07!3|ontology_enrichment_celltype_v019=CL:0000860;7.49e-54;33!CL:0002057;7.49e-54;33!CL:0000473;1.39e-37;39!CL:0000234;1.39e-37;39!CL:0000576;8.68e-35;48!CL:0000766;2.07e-24;69!CL:0002393;1.42e-16;6!CL:0002397;1.42e-16;6!CL:0002087;4.06e-15;104!CL:0000763;5.77e-11;100!CL:0000738;2.72e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,7.86e-70,42;CL:0002057,7.86e-70,42;CL:0000473,7.55e-61,48;CL:0000234,7.55e-61,48;CL:0002194,2.91e-48,59;CL:0000576,2.91e-48,59;CL:0000040,2.91e-48,59;CL:0000559,2.91e-48,59;CL:0002009,1.22e-46,61;CL:0000839,5.33e-43,66;CL:0000557,2.46e-42,67;CL:0000766,2.73e-39,72;CL:0002087,5.82e-27,115;CL:0000763,1.39e-25,108;CL:0000049,1.39e-25,108;CL:0002031,8.03e-23,120;CL:0000738,1.79e-22,136;CL:0000037,9.03e-18,168;CL:0000988,9.47e-17,177;CL:0002032,1.86e-16,161;CL:0000837,1.86e-16,161;CL:0002393,3.09e-11,9;CL:0002397,3.09e-11,9;CL:0000134,4.04e-07,354;CL:0002320,6.26e-07,361|ontology_enrichment_development_v019=CL:0002057;6.08e-49;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.72e-51!80;UBERON:0002390!7.13e-48!102;UBERON:0003061!7.13e-48!102;UBERON:0001474!1.79e-47!86;UBERON:0002193!5.24e-43!112;UBERON:0004765!2.82e-42!101;UBERON:0001434!2.82e-42!101;UBERON:0002405!6.53e-34!115;UBERON:0002204!6.03e-23!167;UBERON:0003081!5.96e-19!216;UBERON:0002384!5.44e-13!375;UBERON:0000926!2.59e-07!448;UBERON:0004120!2.59e-07!448;UBERON:0006603!2.59e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-37,76;UBERON:0001474,2.70e-34,82;UBERON:0002390,5.57e-32,98;UBERON:0003061,5.57e-32,98;UBERON:0004765,4.36e-31,90;UBERON:0002405,5.04e-30,93;UBERON:0002193,7.71e-29,108;UBERON:0001434,8.67e-28,100;UBERON:0002204,8.77e-16,167;UBERON:0003081,2.64e-14,203;UBERON:0000926,2.50e-08,315;UBERON:0004120,2.50e-08,315;UBERON:0006603,2.50e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,6.09394949385065,3.00816671205213,2.82114131930607,0,0,0,0,0,0,0.464858073811369,0,0.929119112685311,1.43846196161075,0.768482119587302,2.60130452877444,5.86067657252252,3.87290810150296,1.35426486594342,1.12945403725563,0.272906150057846,0.674170453335254,9.48860066349798,8.98601275813062,8.95071976118658,0.659702600373432,0.598390972864896,0,3.19230162491442,2.8369261234557,2.4912889959823,0.251248665256743,0.521482918420201,0.868755378820466,0.605399502633369,1.47311054395026,1.26584954976354,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30780442..30780455,+ | |||
|id=chr10:30780442..30780455,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.32e-99!42;CL:0000860!8.75e-92!45;CL:0002009!1.01e-64!65;CL:0002194!1.38e-62!63;CL:0000576!1.38e-62!63;CL:0000040!1.38e-62!63;CL:0000559!1.38e-62!63;CL:0000557!9.09e-59!71;CL:0000839!9.12e-56!70;CL:0000766!1.50e-54!76;CL:0002087!9.55e-43!119;CL:0000763!4.29e-40!112;CL:0000049!4.29e-40!112;CL:0000738!5.48e-40!140;CL:0002031!1.29e-35!124;CL:0000037!3.53e-33!172;CL:0000566!3.53e-33!172;CL:0000988!5.90e-31!182;CL:0002032!9.80e-29!165;CL:0000837!9.80e-29!165;CL:0000842!5.70e-15!3;CL:0000134!5.58e-14!358;CL:0002320!1.46e-13!365;CL:0000219!4.36e-12!390;CL:0000224!2.35e-11!4;CL:0000034!1.27e-10!444;CL:0000048!2.55e-10!430;CL:0000723!4.55e-10!436;CL:0002393!5.12e-09!9;CL:0002397!5.12e-09!9;CL:0000080!1.01e-07!6;CL:0000623!4.27e-07!3;CL:0000825!4.27e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.49e-54;33!CL:0002057;7.49e-54;33!CL:0000473;1.39e-37;39!CL:0000234;1.39e-37;39!CL:0000576;8.68e-35;48!CL:0000766;2.07e-24;69!CL:0002393;1.42e-16;6!CL:0002397;1.42e-16;6!CL:0002087;4.06e-15;104!CL:0000763;5.77e-11;100!CL:0000738;2.72e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.86e-70,42;CL:0002057,7.86e-70,42;CL:0000473,7.55e-61,48;CL:0000234,7.55e-61,48;CL:0002194,2.91e-48,59;CL:0000576,2.91e-48,59;CL:0000040,2.91e-48,59;CL:0000559,2.91e-48,59;CL:0002009,1.22e-46,61;CL:0000839,5.33e-43,66;CL:0000557,2.46e-42,67;CL:0000766,2.73e-39,72;CL:0002087,5.82e-27,115;CL:0000763,1.39e-25,108;CL:0000049,1.39e-25,108;CL:0002031,8.03e-23,120;CL:0000738,1.79e-22,136;CL:0000037,9.03e-18,168;CL:0000988,9.47e-17,177;CL:0002032,1.86e-16,161;CL:0000837,1.86e-16,161;CL:0002393,3.09e-11,9;CL:0002397,3.09e-11,9;CL:0000134,4.04e-07,354;CL:0002320,6.26e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.08e-49;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.72e-51!80;UBERON:0002390!7.13e-48!102;UBERON:0003061!7.13e-48!102;UBERON:0001474!1.79e-47!86;UBERON:0002193!5.24e-43!112;UBERON:0004765!2.82e-42!101;UBERON:0001434!2.82e-42!101;UBERON:0002405!6.53e-34!115;UBERON:0002204!6.03e-23!167;UBERON:0003081!5.96e-19!216;UBERON:0002384!5.44e-13!375;UBERON:0000926!2.59e-07!448;UBERON:0004120!2.59e-07!448;UBERON:0006603!2.59e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-37,76;UBERON:0001474,2.70e-34,82;UBERON:0002390,5.57e-32,98;UBERON:0003061,5.57e-32,98;UBERON:0004765,4.36e-31,90;UBERON:0002405,5.04e-30,93;UBERON:0002193,7.71e-29,108;UBERON:0001434,8.67e-28,100;UBERON:0002204,8.77e-16,167;UBERON:0003081,2.64e-14,203;UBERON:0000926,2.50e-08,315;UBERON:0004120,2.50e-08,315;UBERON:0006603,2.50e-08,315 | |||
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|short_description=p@chr10:30780442..30780455,+ | |||
}} |
Revision as of 13:07, 10 September 2013
Short description: | p@chr10:30780442..30780455, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:30780442..30780455, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.86e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.86e-70 | 42 |
defensive cell | 7.55e-61 | 48 |
phagocyte | 7.55e-61 | 48 |
monopoietic cell | 2.91e-48 | 59 |
monocyte | 2.91e-48 | 59 |
monoblast | 2.91e-48 | 59 |
promonocyte | 2.91e-48 | 59 |
macrophage dendritic cell progenitor | 1.22e-46 | 61 |
myeloid lineage restricted progenitor cell | 5.33e-43 | 66 |
granulocyte monocyte progenitor cell | 2.46e-42 | 67 |
myeloid leukocyte | 2.73e-39 | 72 |
nongranular leukocyte | 5.82e-27 | 115 |
myeloid cell | 1.39e-25 | 108 |
common myeloid progenitor | 1.39e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 8.03e-23 | 120 |
leukocyte | 1.79e-22 | 136 |
hematopoietic stem cell | 9.03e-18 | 168 |
hematopoietic cell | 9.47e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.86e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-16 | 161 |
intermediate monocyte | 3.09e-11 | 9 |
CD14-positive, CD16-positive monocyte | 3.09e-11 | 9 |
mesenchymal cell | 4.04e-07 | 354 |
connective tissue cell | 6.26e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.89e-37 | 76 |
bone element | 2.70e-34 | 82 |
hematopoietic system | 5.57e-32 | 98 |
blood island | 5.57e-32 | 98 |
skeletal element | 4.36e-31 | 90 |
immune system | 5.04e-30 | 93 |
hemolymphoid system | 7.71e-29 | 108 |
skeletal system | 8.67e-28 | 100 |
musculoskeletal system | 8.77e-16 | 167 |
lateral plate mesoderm | 2.64e-14 | 203 |
mesoderm | 2.50e-08 | 315 |
mesoderm-derived structure | 2.50e-08 | 315 |
presumptive mesoderm | 2.50e-08 | 315 |
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