FFCP PHASE1:Hg19::chr10:30831806..30831830,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:30831806..30831830,+|id=chr10:30831806..30831830,+|ontology_enrichment_celltype=CL:0002057!1.07e-97!42;CL:0000860!8.32e-91!45;CL:0002194!8.37e-67!63;CL:0000576!8.37e-67!63;CL:0000040!8.37e-67!63;CL:0000559!8.37e-67!63;CL:0002009!1.33e-64!65;CL:0000839!1.21e-59!70;CL:0000557!9.84e-59!71;CL:0000766!1.54e-54!76;CL:0002087!7.69e-41!119;CL:0000763!2.75e-35!112;CL:0000049!2.75e-35!112;CL:0000738!7.81e-34!140;CL:0002031!9.69e-34!124;CL:0000037!2.03e-26!172;CL:0000566!2.03e-26!172;CL:0000988!1.24e-24!182;CL:0002032!6.60e-24!165;CL:0000837!6.60e-24!165;CL:0000134!2.30e-14!358;CL:0002320!5.83e-14!365;CL:0000219!1.54e-12!390;CL:0000048!7.81e-11!430;CL:0000723!1.37e-10!436;CL:0000034!2.81e-10!444;CL:0002393!6.83e-10!9;CL:0002397!6.83e-10!9;CL:0000842!4.39e-08!3|ontology_enrichment_celltype_v019=CL:0000860;1.35e-75;33!CL:0002057;1.35e-75;33!CL:0000473;8.52e-51;39!CL:0000234;8.52e-51;39!CL:0000576;3.17e-48;48!CL:0000766;1.82e-28;69!CL:0002087;3.38e-16;104!CL:0002393;2.87e-15;6!CL:0002397;2.87e-15;6!CL:0000763;2.11e-13;100!CL:0000738;2.27e-09;136|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-92,42;CL:0002057,6.62e-92,42;CL:0000473,3.89e-80,48;CL:0000234,3.89e-80,48;CL:0002194,1.19e-63,59;CL:0000576,1.19e-63,59;CL:0000040,1.19e-63,59;CL:0000559,1.19e-63,59;CL:0002009,1.60e-61,61;CL:0000839,9.30e-57,66;CL:0000557,6.88e-56,67;CL:0000766,6.72e-52,72;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0002087,9.26e-32,115;CL:0002031,2.41e-30,120;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0002393,2.26e-10,9;CL:0002397,2.26e-10,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386|ontology_enrichment_development_v019=CL:0002057;3.67e-63;42!CL:0000049;6.19e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.48e-51!80;UBERON:0001474!1.35e-47!86;UBERON:0002390!1.99e-45!102;UBERON:0003061!1.99e-45!102;UBERON:0002193!7.22e-41!112;UBERON:0004765!9.90e-40!101;UBERON:0001434!9.90e-40!101;UBERON:0002405!1.69e-39!115;UBERON:0002204!8.79e-22!167;UBERON:0003081!8.50e-20!216;UBERON:0002384!2.07e-13!375;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-49,76;UBERON:0001474,2.33e-45,82;UBERON:0004765,3.69e-41,90;UBERON:0002405,9.07e-40,93;UBERON:0002390,1.23e-37,98;UBERON:0003061,1.23e-37,98;UBERON:0001434,7.64e-37,100;UBERON:0002193,5.86e-34,108;UBERON:0002204,3.84e-21,167;UBERON:0003081,6.02e-17,203;UBERON:0000926,5.77e-10,315;UBERON:0004120,5.77e-10,315;UBERON:0006603,5.77e-10,315;UBERON:0002384,4.95e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76997704265939,1.20326668482085,2.17010870715852,0,0,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,0.309706370895104,4.31538588483226,0.512321413058201,3.54723344832878,7.92915065694223,5.80936215225443,0,1.50593871634084,0.818718450173537,0.449446968890169,11.6311879100943,12.1953030288916,5.75403413219137,0,0,0,9.57690487474327,7.94339314567596,4.35975574296902,1.00499466102697,1.0429658368404,1.73751075764093,6.65939452896706,8.47038562771399,13.607882659958,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30831806..30831830,+ | |||
|id=chr10:30831806..30831830,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-97!42;CL:0000860!8.32e-91!45;CL:0002194!8.37e-67!63;CL:0000576!8.37e-67!63;CL:0000040!8.37e-67!63;CL:0000559!8.37e-67!63;CL:0002009!1.33e-64!65;CL:0000839!1.21e-59!70;CL:0000557!9.84e-59!71;CL:0000766!1.54e-54!76;CL:0002087!7.69e-41!119;CL:0000763!2.75e-35!112;CL:0000049!2.75e-35!112;CL:0000738!7.81e-34!140;CL:0002031!9.69e-34!124;CL:0000037!2.03e-26!172;CL:0000566!2.03e-26!172;CL:0000988!1.24e-24!182;CL:0002032!6.60e-24!165;CL:0000837!6.60e-24!165;CL:0000134!2.30e-14!358;CL:0002320!5.83e-14!365;CL:0000219!1.54e-12!390;CL:0000048!7.81e-11!430;CL:0000723!1.37e-10!436;CL:0000034!2.81e-10!444;CL:0002393!6.83e-10!9;CL:0002397!6.83e-10!9;CL:0000842!4.39e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-75;33!CL:0002057;1.35e-75;33!CL:0000473;8.52e-51;39!CL:0000234;8.52e-51;39!CL:0000576;3.17e-48;48!CL:0000766;1.82e-28;69!CL:0002087;3.38e-16;104!CL:0002393;2.87e-15;6!CL:0002397;2.87e-15;6!CL:0000763;2.11e-13;100!CL:0000738;2.27e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-92,42;CL:0002057,6.62e-92,42;CL:0000473,3.89e-80,48;CL:0000234,3.89e-80,48;CL:0002194,1.19e-63,59;CL:0000576,1.19e-63,59;CL:0000040,1.19e-63,59;CL:0000559,1.19e-63,59;CL:0002009,1.60e-61,61;CL:0000839,9.30e-57,66;CL:0000557,6.88e-56,67;CL:0000766,6.72e-52,72;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0002087,9.26e-32,115;CL:0002031,2.41e-30,120;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0002393,2.26e-10,9;CL:0002397,2.26e-10,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-63;42!CL:0000049;6.19e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-51!80;UBERON:0001474!1.35e-47!86;UBERON:0002390!1.99e-45!102;UBERON:0003061!1.99e-45!102;UBERON:0002193!7.22e-41!112;UBERON:0004765!9.90e-40!101;UBERON:0001434!9.90e-40!101;UBERON:0002405!1.69e-39!115;UBERON:0002204!8.79e-22!167;UBERON:0003081!8.50e-20!216;UBERON:0002384!2.07e-13!375;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-49,76;UBERON:0001474,2.33e-45,82;UBERON:0004765,3.69e-41,90;UBERON:0002405,9.07e-40,93;UBERON:0002390,1.23e-37,98;UBERON:0003061,1.23e-37,98;UBERON:0001434,7.64e-37,100;UBERON:0002193,5.86e-34,108;UBERON:0002204,3.84e-21,167;UBERON:0003081,6.02e-17,203;UBERON:0000926,5.77e-10,315;UBERON:0004120,5.77e-10,315;UBERON:0006603,5.77e-10,315;UBERON:0002384,4.95e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76997704265939,1.20326668482085,2.17010870715852,0,0,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,0.309706370895104,4.31538588483226,0.512321413058201,3.54723344832878,7.92915065694223,5.80936215225443,0,1.50593871634084,0.818718450173537,0.449446968890169,11.6311879100943,12.1953030288916,5.75403413219137,0,0,0,9.57690487474327,7.94339314567596,4.35975574296902,1.00499466102697,1.0429658368404,1.73751075764093,6.65939452896706,8.47038562771399,13.607882659958,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:30831806..30831830,+ | |||
}} |
Revision as of 13:08, 10 September 2013
Short description: | p@chr10:30831806..30831830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:30831806..30831830, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-92 | 42 |
defensive cell | 3.89e-80 | 48 |
phagocyte | 3.89e-80 | 48 |
monopoietic cell | 1.19e-63 | 59 |
monocyte | 1.19e-63 | 59 |
monoblast | 1.19e-63 | 59 |
promonocyte | 1.19e-63 | 59 |
macrophage dendritic cell progenitor | 1.60e-61 | 61 |
myeloid lineage restricted progenitor cell | 9.30e-57 | 66 |
granulocyte monocyte progenitor cell | 6.88e-56 | 67 |
myeloid leukocyte | 6.72e-52 | 72 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
nongranular leukocyte | 9.26e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-30 | 120 |
leukocyte | 1.66e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
intermediate monocyte | 2.26e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-10 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-49 | 76 |
bone element | 2.33e-45 | 82 |
skeletal element | 3.69e-41 | 90 |
immune system | 9.07e-40 | 93 |
hematopoietic system | 1.23e-37 | 98 |
blood island | 1.23e-37 | 98 |
skeletal system | 7.64e-37 | 100 |
hemolymphoid system | 5.86e-34 | 108 |
musculoskeletal system | 3.84e-21 | 167 |
lateral plate mesoderm | 6.02e-17 | 203 |
mesoderm | 5.77e-10 | 315 |
mesoderm-derived structure | 5.77e-10 | 315 |
presumptive mesoderm | 5.77e-10 | 315 |
connective tissue | 4.95e-08 | 371 |
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