FFCP PHASE1:Hg19::chr10:123734683..123734738,-: Difference between revisions
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{{FFCP | 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875732527676,16.9549427913444,19.9877188362816,8.73514694659128,31.8518253038899,13.9405734876476,24.3759155577214,17.9249584869569,34.517996303005,17.3057113241159,25.6467219670967,11.4971889161006,19.5378502808273,17.5477485302553,20.7990335237823,19.3691472944329,10.603400785088,10.9350933805939,11.9878341970687,11.541677455291,15.8622694615284,18.6407640731442,30.7650930601362,4.22090986463089,16.3535907378682,8.57122937405259,4.70797211106354,6.06965604236632,10.4724608021597,16.4099384800882,53.3533362383258,17.4917769626167,10.0595204805711,9.86591603442736,20.8021159955784,18.5756441159755,26.9231308477263,16.4971369411802,31.3904822911444,46.5710947459843,17.0582797062711,17.1990607639338,19.4416200160505,38.2392940393198,43.0093273862063,26.2525991176895,17.6376500240656,14.5051314914126,25.2663346099046,16.5902318835382,22.8020500174747,15.6198240964346,14.571492213816,30.060480563556,13.9755189811871,14.579700126223,15.2886230236389,12.1922420659594,24.3412579365803,19.8726217721099,15.5382920925095,20.1219101438244,30.1551752147932,25.2569716390753,38.3660720077853,26.0625515461392,36.2706276871584,27.2200057713894,24.846556784467,27.6262003727013,28.9403092904792,33.8767318781134,11.7579324090381,32.3595784715155,15.7903286558089,17.4714535732301,17.8227840196252,27.8952780205044,19.2017639597233,25.2816739365806,23.78496066225,45.8729905695424,11.4274520707621,21.8794820463729,17.0111697381037,43.820183294791,34.4046962553406,22.9343333042322,39.4428905482962,9.58680011691897,23.9992879687208,34.386744633501,19.7157359628378,19.873552031151,16.0071827985802,35.9574310779975,26.2237372712869,36.235771289271,21.3156654160742,21.911827231776,17.3681360120857,45.8794796905046,11.7456982238271,5.89521086343593,14.925049910258,21.5140631392742,22.389568099603,26.6632163239389,24.6729635573543,31.1615065765207,21.0807901651553,24.4405087788153,25.8710001866521,18.5059235712417,22.5873978716285,24.9202596153974,19.4367176614153,25.282187097497,20.3508171527436,27.8558372740837,13.5150597600858,10.5993738485773,35.1961413605181,24.9372546133048,23.1930821639971,13.3151354837103,33.4114497361104,39.7504930456009|short_description=p1@NSMCE4A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25935 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXX6 | |||
|association_with_transcript=0bp_to_ENST00000369017,ENST00000369023,ENST00000489266,uc001lfs.2,uc001lft.2,uc001lfu.1,uc009xzv.2_5end | |||
|description=CAGE_peak_1_at_NSMCE4A_5end | |||
|id=chr10:123734683..123734738,- | |||
|ontology_enrichment_celltype=CL:0000542!1.35e-25!53;CL:0000051!1.35e-25!53;CL:0000838!5.60e-25!52;CL:0000945!2.32e-15!24;CL:0000826!2.32e-15!24;CL:0000037!2.99e-15!172;CL:0000566!2.99e-15!172;CL:0002032!2.82e-13!165;CL:0000837!2.82e-13!165;CL:0000988!2.87e-13!182;CL:0000084!1.37e-10!25;CL:0000827!1.37e-10!25;CL:0000236!2.96e-10!14;CL:0002087!3.18e-10!119;CL:0000791!3.60e-09!18;CL:0000789!3.60e-09!18;CL:0002420!3.60e-09!18;CL:0002419!3.60e-09!18;CL:0000790!3.60e-09!18;CL:0000738!8.10e-09!140;CL:0002031!1.40e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.24e-15;53!CL:0000945;2.25e-15;24!CL:0000084;1.30e-10;25!CL:0000236;1.08e-09;13!CL:0000791;3.44e-09;18!CL:0000789;3.44e-09;18!CL:0002419;3.44e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.35e-25,53;CL:0000051,1.35e-25,53;CL:0000838,5.60e-25,52;CL:0000945,2.32e-15,24;CL:0000826,2.32e-15,24;CL:0000037,4.82e-15,168;CL:0002032,4.49e-13,161;CL:0000837,4.49e-13,161;CL:0000988,7.82e-13,177;CL:0000084,1.37e-10,25;CL:0000827,1.37e-10,25;CL:0000236,2.96e-10,14;CL:0002087,4.70e-10,115;CL:0000791,3.60e-09,18;CL:0000789,3.60e-09,18;CL:0002420,3.60e-09,18;CL:0002419,3.60e-09,18;CL:0000790,3.60e-09,18;CL:0000738,1.25e-08,136;CL:0002031,2.12e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.24e-15;53!CL:0000790;3.44e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!9.10e-15!51;DOID:0060083!9.10e-15!51;DOID:1240!1.80e-11!39;DOID:8692!1.31e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.11e-09;51!DOID:0060083;3.11e-09;51!DOID:1240;6.07e-09;39!DOID:8692;2.98e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.10e-15,51;DOID:0060083,9.10e-15,51;DOID:1240,1.80e-11,39;DOID:8692,1.31e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@NSMCE4A | |||
}} |
Revision as of 12:05, 10 September 2013
Short description: | p1@NSMCE4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NSMCE4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369017, ENST00000369023, ENST00000489266, uc001lfs.2, uc001lft.2, uc001lfu.1, uc009xzv.2_5end |
EntrezGene: | NSMCE4A |
HGNC: | 25935 |
UniProt: | Q9NXX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.35e-25 | 53 |
common lymphoid progenitor | 1.35e-25 | 53 |
lymphoid lineage restricted progenitor cell | 5.60e-25 | 52 |
lymphocyte of B lineage | 2.32e-15 | 24 |
pro-B cell | 2.32e-15 | 24 |
hematopoietic stem cell | 4.82e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.49e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-13 | 161 |
hematopoietic cell | 7.82e-13 | 177 |
T cell | 1.37e-10 | 25 |
pro-T cell | 1.37e-10 | 25 |
B cell | 2.96e-10 | 14 |
nongranular leukocyte | 4.70e-10 | 115 |
mature alpha-beta T cell | 3.60e-09 | 18 |
alpha-beta T cell | 3.60e-09 | 18 |
immature T cell | 3.60e-09 | 18 |
mature T cell | 3.60e-09 | 18 |
immature alpha-beta T cell | 3.60e-09 | 18 |
leukocyte | 1.25e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.10e-15 | 51 |
immune system cancer | 9.10e-15 | 51 |
leukemia | 1.80e-11 | 39 |
myeloid leukemia | 1.31e-08 | 31 |
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