FFCP PHASE1:Hg19::chr11:555277..555290,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:555277..555290,+|id=chr11:555277..555290,+|ontology_enrichment_celltype=CL:0002322!1.89e-08!5|ontology_enrichment_celltype_v019=CL:0002322;7.27e-37;5!CL:0002321;3.15e-12;15!CL:0000784;5.54e-11;3!CL:0000148;2.81e-07;10|ontology_enrichment_celltype_v019_2=CL:0002322,4.35e-37,5;CL:0000784,4.43e-11,3;CL:0000148,2.52e-07,10;CL:0000541,2.52e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!3.98e-07!143|ontology_enrichment_disease_v019=DOID:3371;1.13e-08;1!DOID:4549;1.13e-08;1!DOID:5861;1.13e-08;1!DOID:6496;1.13e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,1.22e-08,1;DOID:4549,1.22e-08,1;DOID:5861,1.22e-08,1;DOID:6496,1.22e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002171;1.13e-08;1!UBERON:0006518;1.13e-08;1!UBERON:0008949;1.13e-08;1!UBERON:0000101;1.13e-08;1!UBERON:0002167;1.13e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.78e-08,1;UBERON:0006518,1.78e-08,1;UBERON:0008949,1.78e-08,1;UBERON:0000101,1.78e-08,1;UBERON:0002167,1.78e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.616804496998528,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,1.03800594213442,1.33770414044857,2.09071047609954,0,0,1.37450978193052,0,0,0,0.950452044448374,0.150575119077773,0.383959833463255,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.654895377488563,0,0,0,0,0,1.43094374583205,0,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.32529768321485,3.83440011469411,1.96956004529204,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,0.184161977871793,0,0,0,0,0.385076685522074,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,3.99308912729002,0,0,0,0,3.1668811219199,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0.874599999961957,0,0.1137934482855,0,0.472775363535873,0.689486746482929,0,1.04174996959975,0,0.361789315876224,1.52581736317083,0.331737779793674,0.591095237907095,0,0,0.278847488557207,0.0769502585037971,0,0,0,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,1.3238419003725,0,0,0,0,0.782205530939212,0.160317640503067,0.426905989478705,0,0.144090417154106,0.229073192331831,1.02956998717179,0,0.248505071130865,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.962776056180637,1.24632101408756,0,0.77380195455795,0.0607495566580247,0,0.394028536495991,0.734364233889974,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0.628817220398664,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.276697269872462,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,0.637724760305049,0.991486114072017,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0,0,0,2.7348740450911,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.156986185701028,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0,0,10.5779697084994,0.173858272302579,0,0,0.17071847709395,2.76503864725637,0.430227358820278,0,0,0.423387050190929,0,0.62041277132864,0,0.559277158988962,0,0.121917924982269,0,0,0,0,0,1.39265542612958,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0.872701380680755,0,0,0,0,0.252332849670158,0,0.506794004045748,0.101988829741982,0,0.275684698604535,0.50141507858475,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.31037357147929,0,0.25458863311266,0.404234377916439,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0|short_description=p@chr11:555277..555290,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:555277..555290,+ | |||
|id=chr11:555277..555290,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.89e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.27e-37;5!CL:0002321;3.15e-12;15!CL:0000784;5.54e-11;3!CL:0000148;2.81e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.35e-37,5;CL:0000784,4.43e-11,3;CL:0000148,2.52e-07,10;CL:0000541,2.52e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.98e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.13e-08;1!DOID:4549;1.13e-08;1!DOID:5861;1.13e-08;1!DOID:6496;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.22e-08,1;DOID:4549,1.22e-08,1;DOID:5861,1.22e-08,1;DOID:6496,1.22e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.13e-08;1!UBERON:0006518;1.13e-08;1!UBERON:0008949;1.13e-08;1!UBERON:0000101;1.13e-08;1!UBERON:0002167;1.13e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.78e-08,1;UBERON:0006518,1.78e-08,1;UBERON:0008949,1.78e-08,1;UBERON:0000101,1.78e-08,1;UBERON:0002167,1.78e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.616804496998528,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,1.03800594213442,1.33770414044857,2.09071047609954,0,0,1.37450978193052,0,0,0,0.950452044448374,0.150575119077773,0.383959833463255,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.654895377488563,0,0,0,0,0,1.43094374583205,0,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.32529768321485,3.83440011469411,1.96956004529204,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,0.184161977871793,0,0,0,0,0.385076685522074,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,3.99308912729002,0,0,0,0,3.1668811219199,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0.874599999961957,0,0.1137934482855,0,0.472775363535873,0.689486746482929,0,1.04174996959975,0,0.361789315876224,1.52581736317083,0.331737779793674,0.591095237907095,0,0,0.278847488557207,0.0769502585037971,0,0,0,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,1.3238419003725,0,0,0,0,0.782205530939212,0.160317640503067,0.426905989478705,0,0.144090417154106,0.229073192331831,1.02956998717179,0,0.248505071130865,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.962776056180637,1.24632101408756,0,0.77380195455795,0.0607495566580247,0,0.394028536495991,0.734364233889974,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0.628817220398664,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.276697269872462,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,0.637724760305049,0.991486114072017,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0,0,0,2.7348740450911,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.156986185701028,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0,0,10.5779697084994,0.173858272302579,0,0,0.17071847709395,2.76503864725637,0.430227358820278,0,0,0.423387050190929,0,0.62041277132864,0,0.559277158988962,0,0.121917924982269,0,0,0,0,0,1.39265542612958,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0.872701380680755,0,0,0,0,0.252332849670158,0,0.506794004045748,0.101988829741982,0,0.275684698604535,0.50141507858475,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.31037357147929,0,0.25458863311266,0.404234377916439,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr11:555277..555290,+ | |||
}} |
Revision as of 18:06, 10 September 2013
Short description: | p@chr11:555277..555290, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:555277..555290, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.35e-37 | 5 |
plasmacytoid dendritic cell | 4.43e-11 | 3 |
melanocyte | 2.52e-07 | 10 |
melanoblast | 2.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.78e-08 | 1 |
right lung lobe | 1.78e-08 | 1 |
lower lobe of lung | 1.78e-08 | 1 |
lobe of lung | 1.78e-08 | 1 |
right lung | 1.78e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.22e-08 | 1 |
extraosseous chondrosarcoma | 1.22e-08 | 1 |
myxoid chondrosarcoma | 1.22e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.