FFCP PHASE1:Hg19::chr11:35211471..35211506,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:35211471..35211506,-|id=chr11:35211471..35211506,-|ontology_enrichment_celltype=CL:0002371!2.42e-12!591;CL:0002009!6.15e-12!65;CL:0002194!9.22e-12!63;CL:0000576!9.22e-12!63;CL:0000040!9.22e-12!63;CL:0000559!9.22e-12!63;CL:0000003!2.43e-11!722;CL:0000548!3.56e-11!679;CL:0000004!3.56e-11!679;CL:0000255!3.56e-11!679;CL:0000055!6.19e-11!180;CL:0002057!7.65e-11!42;CL:0000012!1.17e-10!682;CL:0000557!1.28e-10!71;CL:0000144!2.54e-10!625;CL:0000839!4.78e-10!70;CL:0000860!6.64e-10!45;CL:0000766!2.74e-09!76;CL:0000192!7.14e-07!42;CL:0000514!7.14e-07!42|ontology_enrichment_celltype_v019=CL:0000860;1.41e-10;33!CL:0002057;1.41e-10;33!CL:0000473;4.37e-10;39!CL:0000234;4.37e-10;39|ontology_enrichment_celltype_v019_2=CL:0002194,2.15e-12,59;CL:0000576,2.15e-12,59;CL:0000040,2.15e-12,59;CL:0000559,2.15e-12,59;CL:0000473,2.67e-12,48;CL:0000234,2.67e-12,48;CL:0002009,2.79e-12,61;CL:0000557,3.70e-11,67;CL:0000860,4.89e-11,42;CL:0002057,4.89e-11,42;CL:0000839,9.63e-11,66;CL:0000766,8.58e-10,72;CL:0000723,2.14e-08,433;CL:0000048,4.37e-08,427;CL:0000034,3.67e-07,441;CL:0002620,9.19e-07,23|ontology_enrichment_development_v019=CL:0002057;5.46e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!7.42e-13!167;UBERON:0002371!7.05e-10!80;UBERON:0002390!3.51e-09!102;UBERON:0003061!3.51e-09!102;UBERON:0003102!5.29e-08!95;UBERON:0001474!7.72e-08!86;UBERON:0004765!8.59e-08!101;UBERON:0001434!8.59e-08!101;UBERON:0002193!3.78e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.66e-13,167;UBERON:0002371,2.23e-10,76;UBERON:0004765,3.29e-09,90;UBERON:0001474,2.03e-08,82;UBERON:0001434,2.13e-08,100;UBERON:0003102,2.17e-08,99;UBERON:0002390,2.34e-08,98;UBERON:0003061,2.34e-08,98;UBERON:0002405,5.09e-07,93;UBERON:0002193,6.61e-07,108|phase1_expression=1.99846217197612,0.642301571672949,1.26858963686374,3.00219895059391,0,1.74467704820074,0,2.52687949370732,3.3954131665979,0.982935746006035,0.697801167972428,0.436882744260345,0.263766978228454,3.34169152992126,5.30235801164665,3.36162573225888,1.20538905604795,3.65155045193687,6.34312638427659,1.10808952269109,1.02000345622126,2.82109249330279,2.57612388417951,3.14811177667634,3.26410862946487,0.229240217243854,0.328402357799783,0.236132343941038,0,0.767658796194425,2.78669021968937,1.83884244895785,3.614471025339,2.58827807116751,0,0,0,3.32397245119126,2.80762226458198,3.47217393145363,1.11957737119962,2.26725566213286,1.28787783817093,4.50734540216651,0.755751887377619,2.42584061187816,6.27558399645349,4.52284676824008,3.09706370895104,6.90461741573161,2.30544635876191,2.83778675866302,5.17118521104928,1.93645405075148,2.70852973188684,5.83551252582075,1.91034305040492,4.04502272001152,13.4676912643197,2.88836124368484,4.47535988059329,8.90598510504134,3.78980949481101,2.98357325372886,11.6083695451434,4.53908179752912,6.22822248995575,6.53246529667532,4.17186334736161,2.17188844705117,12.1079900526674,3.68277635987565,6.0127853613768,1.69004229049553,1.06302149982522,0.628975936525128,2.92054440980887,2.10247649978109,1.76798145366788,0.570025487482497,1.39241674039363,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,3.52342313622563,1.91136614062614,0,0.560508562981536,0.263384084775077,1.37696839079683,5.89516144123747,2.2616164889946,2.00623794468814,0.651844533267181,0.946895611469467,3.89653456815823,1.44833593950726,1.76763544484902,1.77227115666897,2.16643091012012,1.28091319725675,2.86130564631732,1.31550323682941,2.76350017785848,0.869409257205157,1.03800594213442,1.07016331235885,2.09071047609954,2.03956816855619,1.91610246800961,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0.752875595388864,1.15187950038977,1.24930726552346,0.236777252044017,0,1.20964045934839,2.40696176205157,1.73789284659359,0,0,0,13.373248638229,2.00535164254356,5.06962816362883,0,3.89307896242109,0.283604451492204,2.4390233720882,1.14185221401064,0.916853528483988,4.37154345951051,2.22470665670658,3.24547393654683,5.92041106817509,4.12169677608482,1.90792499444274,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0.56530794192401,2.09749718104953,2.20094433552054,0.208994966536811,0,0,0,1.61131726843659,0.760272105718513,0,2.20597848207521,0,0,0,0,0,0.949265659568129,0.183201743930407,1.31780417436063,0,4.79703457356788,3.47880366186723,1.77282716330412,1.58891016975863,8.60509862246441,3.54668382198357,2.24271040056923,0,1.97334038733728,0.311211035399766,1.34710672069688,0.980771418680752,0.756787138224657,0.576175924479999,2.10889288650417,2.18512053781224,0.570471821544449,1.79338416662161,1.996386476944,1.61872944368132,1.96631129383148,1.63323337003915,1.71968044236475,1.34323515528495,4.75201142912821,2.22540236350701,0,2.874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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:35211471..35211506,- | |||
|id=chr11:35211471..35211506,- | |||
|ontology_enrichment_celltype=CL:0002371!2.42e-12!591;CL:0002009!6.15e-12!65;CL:0002194!9.22e-12!63;CL:0000576!9.22e-12!63;CL:0000040!9.22e-12!63;CL:0000559!9.22e-12!63;CL:0000003!2.43e-11!722;CL:0000548!3.56e-11!679;CL:0000004!3.56e-11!679;CL:0000255!3.56e-11!679;CL:0000055!6.19e-11!180;CL:0002057!7.65e-11!42;CL:0000012!1.17e-10!682;CL:0000557!1.28e-10!71;CL:0000144!2.54e-10!625;CL:0000839!4.78e-10!70;CL:0000860!6.64e-10!45;CL:0000766!2.74e-09!76;CL:0000192!7.14e-07!42;CL:0000514!7.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-10;33!CL:0002057;1.41e-10;33!CL:0000473;4.37e-10;39!CL:0000234;4.37e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.15e-12,59;CL:0000576,2.15e-12,59;CL:0000040,2.15e-12,59;CL:0000559,2.15e-12,59;CL:0000473,2.67e-12,48;CL:0000234,2.67e-12,48;CL:0002009,2.79e-12,61;CL:0000557,3.70e-11,67;CL:0000860,4.89e-11,42;CL:0002057,4.89e-11,42;CL:0000839,9.63e-11,66;CL:0000766,8.58e-10,72;CL:0000723,2.14e-08,433;CL:0000048,4.37e-08,427;CL:0000034,3.67e-07,441;CL:0002620,9.19e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.42e-13!167;UBERON:0002371!7.05e-10!80;UBERON:0002390!3.51e-09!102;UBERON:0003061!3.51e-09!102;UBERON:0003102!5.29e-08!95;UBERON:0001474!7.72e-08!86;UBERON:0004765!8.59e-08!101;UBERON:0001434!8.59e-08!101;UBERON:0002193!3.78e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.66e-13,167;UBERON:0002371,2.23e-10,76;UBERON:0004765,3.29e-09,90;UBERON:0001474,2.03e-08,82;UBERON:0001434,2.13e-08,100;UBERON:0003102,2.17e-08,99;UBERON:0002390,2.34e-08,98;UBERON:0003061,2.34e-08,98;UBERON:0002405,5.09e-07,93;UBERON:0002193,6.61e-07,108 | |||
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| |||
|short_description=p@chr11:35211471..35211506,- | |||
}} |
Revision as of 17:37, 10 September 2013
Short description: | p@chr11:35211471..35211506, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35211471..35211506, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.15e-12 | 59 |
monocyte | 2.15e-12 | 59 |
monoblast | 2.15e-12 | 59 |
promonocyte | 2.15e-12 | 59 |
defensive cell | 2.67e-12 | 48 |
phagocyte | 2.67e-12 | 48 |
macrophage dendritic cell progenitor | 2.79e-12 | 61 |
granulocyte monocyte progenitor cell | 3.70e-11 | 67 |
classical monocyte | 4.89e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-11 | 42 |
myeloid lineage restricted progenitor cell | 9.63e-11 | 66 |
myeloid leukocyte | 8.58e-10 | 72 |
somatic stem cell | 2.14e-08 | 433 |
multi fate stem cell | 4.37e-08 | 427 |
stem cell | 3.67e-07 | 441 |
skin fibroblast | 9.19e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.66e-13 | 167 |
bone marrow | 2.23e-10 | 76 |
skeletal element | 3.29e-09 | 90 |
bone element | 2.03e-08 | 82 |
skeletal system | 2.13e-08 | 100 |
surface structure | 2.17e-08 | 99 |
hematopoietic system | 2.34e-08 | 98 |
blood island | 2.34e-08 | 98 |
immune system | 5.09e-07 | 93 |
hemolymphoid system | 6.61e-07 | 108 |
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