FFCP PHASE1:Hg19::chr11:57182176..57182224,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C359|description=CAGE_peak_at_chr11:57182176..57182224,-|id=chr11:57182176..57182224,-|ontology_enrichment_celltype=CL:0000763!4.57e-22!112;CL:0000049!4.57e-22!112;CL:0000839!2.18e-19!70;CL:0000557!2.53e-19!71;CL:0002057!1.41e-18!42;CL:0002009!7.66e-18!65;CL:0002194!1.60e-16!63;CL:0000576!1.60e-16!63;CL:0000040!1.60e-16!63;CL:0000559!1.60e-16!63;CL:0000860!2.51e-16!45;CL:0000766!1.83e-15!76;CL:0002032!8.33e-15!165;CL:0000837!8.33e-15!165;CL:0000037!4.12e-14!172;CL:0000566!4.12e-14!172;CL:0000988!2.98e-13!182;CL:0002031!5.04e-12!124;CL:0000738!1.71e-09!140;CL:0002087!4.16e-09!119;CL:0000723!1.30e-07!436;CL:0000219!1.61e-07!390;CL:0000048!2.31e-07!430;CL:0000134!2.71e-07!358;CL:0000034!2.97e-07!444;CL:0002320!4.81e-07!365|ontology_enrichment_celltype_v019=CL:0000860;4.46e-34;33!CL:0002057;4.46e-34;33!CL:0000473;5.74e-29;39!CL:0000234;5.74e-29;39!CL:0000576;1.26e-16;48!CL:0000766;1.05e-10;69!CL:0002087;2.26e-09;104!CL:0000945;1.63e-08;24!CL:0000763;3.53e-07;100!CL:0000738;3.68e-07;136!CL:0002567;5.99e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-31,48;CL:0000234,1.42e-31,48;CL:0000860,3.41e-29,42;CL:0002057,3.41e-29,42;CL:0002031,3.37e-26,120;CL:0002009,4.71e-26,61;CL:0000557,6.45e-26,67;CL:0002194,2.64e-24,59;CL:0000576,2.64e-24,59;CL:0000040,2.64e-24,59;CL:0000559,2.64e-24,59;CL:0000839,9.05e-24,66;CL:0002087,1.81e-23,115;CL:0000738,2.51e-22,136;CL:0000766,2.09e-21,72;CL:0002032,5.94e-21,161;CL:0000837,5.94e-21,161;CL:0000037,8.79e-20,168;CL:0000988,2.06e-18,177;CL:0000763,1.55e-17,108;CL:0000049,1.55e-17,108;CL:0000945,1.39e-08,24;CL:0000826,1.39e-08,24;CL:0000219,2.04e-08,386;CL:0000134,2.07e-08,354;CL:0002320,4.25e-08,361;CL:0000048,6.77e-07,427;CL:0002567,8.06e-07,3|ontology_enrichment_development_v019=CL:0002057;3.07e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.03e-16!80;UBERON:0002390!2.34e-15!102;UBERON:0003061!2.34e-15!102;UBERON:0001474!8.54e-15!86;UBERON:0002193!1.16e-14!112;UBERON:0004765!3.94e-14!101;UBERON:0001434!3.94e-14!101;UBERON:0002405!1.33e-13!115;UBERON:0002204!1.37e-11!167;UBERON:0001737!7.99e-08!9;UBERON:0002384!2.26e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.83e-22,76;UBERON:0001474,2.75e-20,82;UBERON:0002405,2.94e-19,93;UBERON:0004765,4.77e-18,90;UBERON:0002390,5.18e-18,98;UBERON:0003061,5.18e-18,98;UBERON:0002193,7.27e-16,108;UBERON:0001434,9.45e-16,100;UBERON:0002204,2.21e-09,167;UBERON:0002384,1.13e-07,371|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,5.42535180810454,3.85872770414745,2.99100968991981,0,0.383829398097213,0,0,0,0,0,1.56386155736164,0,0,0,0.434021741431704,0.447830948479849,0,0,0.726991193897824,0.377875943688809,0.727752183563449,1.39457422143411,0.822335776043652,2.16794459626573,1.43846196161075,1.2808035326455,1.18241114944293,0.689491361473237,1.29096936716765,1.35426486594342,1.69418105588344,1.36453075028923,0.449446968890169,1.22433556948361,1.60464513538047,0.639337125799041,0.329851300186716,0.997318288108159,0.852449501065388,2.61188314765726,0.56738522469114,1.24564449799115,1.00499466102697,1.0429658368404,0.65156653411535,2.42159801053347,1.47311054395026,1.89877432464531,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.491337269247072,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,1.0647612003586,0.842923450390509,0.482022059766964,0.772057809126758,1.30727666455444,0.71181185733329,0.539325232640658,0.98110732562673,0.769494313892781,0,0,0,0,5.07020139287323,0,1.18157981336281,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0.738651018262192,0.702012795417713,0.594524649154913,0,0,0.141775097242386,0,0.290633938513962,0,2.46331618947972,0.264145302039678,0.20732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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_at_chr11:57182176..57182224,- | |||
|id=chr11:57182176..57182224,- | |||
|ontology_enrichment_celltype=CL:0000763!4.57e-22!112;CL:0000049!4.57e-22!112;CL:0000839!2.18e-19!70;CL:0000557!2.53e-19!71;CL:0002057!1.41e-18!42;CL:0002009!7.66e-18!65;CL:0002194!1.60e-16!63;CL:0000576!1.60e-16!63;CL:0000040!1.60e-16!63;CL:0000559!1.60e-16!63;CL:0000860!2.51e-16!45;CL:0000766!1.83e-15!76;CL:0002032!8.33e-15!165;CL:0000837!8.33e-15!165;CL:0000037!4.12e-14!172;CL:0000566!4.12e-14!172;CL:0000988!2.98e-13!182;CL:0002031!5.04e-12!124;CL:0000738!1.71e-09!140;CL:0002087!4.16e-09!119;CL:0000723!1.30e-07!436;CL:0000219!1.61e-07!390;CL:0000048!2.31e-07!430;CL:0000134!2.71e-07!358;CL:0000034!2.97e-07!444;CL:0002320!4.81e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-34;33!CL:0002057;4.46e-34;33!CL:0000473;5.74e-29;39!CL:0000234;5.74e-29;39!CL:0000576;1.26e-16;48!CL:0000766;1.05e-10;69!CL:0002087;2.26e-09;104!CL:0000945;1.63e-08;24!CL:0000763;3.53e-07;100!CL:0000738;3.68e-07;136!CL:0002567;5.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-31,48;CL:0000234,1.42e-31,48;CL:0000860,3.41e-29,42;CL:0002057,3.41e-29,42;CL:0002031,3.37e-26,120;CL:0002009,4.71e-26,61;CL:0000557,6.45e-26,67;CL:0002194,2.64e-24,59;CL:0000576,2.64e-24,59;CL:0000040,2.64e-24,59;CL:0000559,2.64e-24,59;CL:0000839,9.05e-24,66;CL:0002087,1.81e-23,115;CL:0000738,2.51e-22,136;CL:0000766,2.09e-21,72;CL:0002032,5.94e-21,161;CL:0000837,5.94e-21,161;CL:0000037,8.79e-20,168;CL:0000988,2.06e-18,177;CL:0000763,1.55e-17,108;CL:0000049,1.55e-17,108;CL:0000945,1.39e-08,24;CL:0000826,1.39e-08,24;CL:0000219,2.04e-08,386;CL:0000134,2.07e-08,354;CL:0002320,4.25e-08,361;CL:0000048,6.77e-07,427;CL:0002567,8.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-16!80;UBERON:0002390!2.34e-15!102;UBERON:0003061!2.34e-15!102;UBERON:0001474!8.54e-15!86;UBERON:0002193!1.16e-14!112;UBERON:0004765!3.94e-14!101;UBERON:0001434!3.94e-14!101;UBERON:0002405!1.33e-13!115;UBERON:0002204!1.37e-11!167;UBERON:0001737!7.99e-08!9;UBERON:0002384!2.26e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.83e-22,76;UBERON:0001474,2.75e-20,82;UBERON:0002405,2.94e-19,93;UBERON:0004765,4.77e-18,90;UBERON:0002390,5.18e-18,98;UBERON:0003061,5.18e-18,98;UBERON:0002193,7.27e-16,108;UBERON:0001434,9.45e-16,100;UBERON:0002204,2.21e-09,167;UBERON:0002384,1.13e-07,371 | |||
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| |||
|short_description=p@chr11:57182176..57182224,- | |||
}} |
Revision as of 18:08, 10 September 2013
Short description: | p@chr11:57182176..57182224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:57182176..57182224, - |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.42e-31 | 48 |
phagocyte | 1.42e-31 | 48 |
classical monocyte | 3.41e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-29 | 42 |
hematopoietic lineage restricted progenitor cell | 3.37e-26 | 120 |
macrophage dendritic cell progenitor | 4.71e-26 | 61 |
granulocyte monocyte progenitor cell | 6.45e-26 | 67 |
monopoietic cell | 2.64e-24 | 59 |
monocyte | 2.64e-24 | 59 |
monoblast | 2.64e-24 | 59 |
promonocyte | 2.64e-24 | 59 |
myeloid lineage restricted progenitor cell | 9.05e-24 | 66 |
nongranular leukocyte | 1.81e-23 | 115 |
leukocyte | 2.51e-22 | 136 |
myeloid leukocyte | 2.09e-21 | 72 |
hematopoietic oligopotent progenitor cell | 5.94e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.94e-21 | 161 |
hematopoietic stem cell | 8.79e-20 | 168 |
hematopoietic cell | 2.06e-18 | 177 |
myeloid cell | 1.55e-17 | 108 |
common myeloid progenitor | 1.55e-17 | 108 |
lymphocyte of B lineage | 1.39e-08 | 24 |
pro-B cell | 1.39e-08 | 24 |
motile cell | 2.04e-08 | 386 |
mesenchymal cell | 2.07e-08 | 354 |
connective tissue cell | 4.25e-08 | 361 |
multi fate stem cell | 6.77e-07 | 427 |
light melanocyte | 8.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.83e-22 | 76 |
bone element | 2.75e-20 | 82 |
immune system | 2.94e-19 | 93 |
skeletal element | 4.77e-18 | 90 |
hematopoietic system | 5.18e-18 | 98 |
blood island | 5.18e-18 | 98 |
hemolymphoid system | 7.27e-16 | 108 |
skeletal system | 9.45e-16 | 100 |
musculoskeletal system | 2.21e-09 | 167 |
connective tissue | 1.13e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.